ID   AY871070; SV 1; linear; genomic RNA; STD; VRL; 841 BP.
XX
AC   AY871070;
XX
DT   01-JAN-2006 (Rel. 86, Created)
DT   07-JUN-2006 (Rel. 88, Last updated, Version 2)
XX
DE   Cucumber mosaic virus isolate B13 capsid protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-841
RX   DOI; 10.1007/s11262-005-6912-2.
RX   PUBMED; 16732480.
RA   Bashir N.S., Kalhor M.R., Zarghani S.N.;
RT   "Detection, differentiation and phylogenetic analysis of cucumber mosaic
RT   virus isolates from cucurbits in the northwest region of Iran";
RL   Virus Genes 32(3):277-288(2006).
XX
RN   [2]
RP   1-841
RA   Sokhandan Bashir N., Rasaei Kalhor M., Nourinejad Zargani S.;
RT   ;
RL   Submitted (23-DEC-2004) to the INSDC.
RL   Plant Protection, University of Tabriz, 29 Bahman Blvd., Tabriz, E. Az.
RL   51664, Iran
XX
DR   MD5; 7009c75db2bcd0bae1c9d6e880cecc10.
DR   EuropePMC; PMC4908998; 27366772.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..841
FT                   /organism="Cucumber mosaic virus"
FT                   /host="cucumber"
FT                   /isolate="B13"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran:Basmenj"
FT                   /clone="1"
FT                   /note="causes leaf-yellowing subgroup: I"
FT                   /db_xref="taxon:12305"
FT   5'UTR           <1..79
FT   gene            80..736
FT                   /gene="CP"
FT   CDS             80..736
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q2THX7"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q2THX7"
FT                   /protein_id="AAX70968.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRAGIGDMRKYAVLVYSKDDALETDELVLHVDTEHQRIPTSGVLPV"
XX
SQ   Sequence 841 BP; 189 A; 211 C; 202 G; 239 T; 0 other;
     attgcgttat tgtctactga ctatatagag agtgtgtgtg ctgtgttttc tcttttgtgt        60
     cgtagaattg agtcgagtca tggacaaatc tgaatcaacc agtgctggtc gtaaccgtcg       120
     acgtcgtccg cgtcgtggtt cccgctccgc cccctcctcc gcggatgcta actttagagt       180
     cttgtcgcag cagctttcgc gacttaataa gacgttagca gctggtcgtc caactattaa       240
     ccacccaacc tttgtaggga gtgaacgctg tagacctggg tacacgttca catctattac       300
     cctaaagcca ccaaaaatag accgtgggtc ttattacggt aaaaggttgt tactacctga       360
     ttcagtcaca gaatatgata agaagcttgt ttcgcgcatt caaattcgag ttaatccttt       420
     gccgaaattt gattctaccg tgtgggtgac agtccgtaaa gttcctgcct cctcggactt       480
     atccgttgcc gccatctctg ctatgttcgc ggacggagcc tcaccggtac tggtttatca       540
     gtatgccgca tctggagtcc aagccaacaa caaattgttg tatgatcttt cggcgatgcg       600
     cgctggtata ggtgacatga gaaagtacgc cgtcctcgtg tattcaaaag acgatgcgct       660
     cgagacggac gagctagtac ttcatgttga caccgagcac caacgcattc ccacgtctgg       720
     agtgctccca gtctgattct gtgttcccag aatcctccct ccgatctctg tggcgggagc       780
     tgagttggca gttctgctat aaactgtctg aagtcactaa acgttttacg gtgaacgggt       840
     t                                                                       841
//