ID AY847464; SV 1; linear; genomic RNA; STD; VRL; 3511 BP. XX AC AY847464; XX DT 08-JAN-2005 (Rel. 82, Created) DT 08-JAN-2005 (Rel. 82, Last updated, Version 1) XX DE Rice dwarf virus isolate Yunnan segment S2, complete sequence. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3511 RA Wu G., Zhu S., Li Y.; RT "Cloning RDV S2 segment from RDV (China Yunnan isolate)"; RL Unpublished. XX RN [2] RP 1-3511 RA Wu G., Zhu S., Li Y.; RT ; RL Submitted (06-DEC-2004) to the INSDC. RL Life Science, Peking University, 5# Road The Summer Palace, Beijing 100871, RL China XX DR MD5; 8e130782e615588aff5f8ae4ee452685. XX FH Key Location/Qualifiers FH FT source 1..3511 FT /organism="Rice dwarf virus" FT /segment="S2" FT /isolate="Yunnan" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:10991" FT CDS 15..3461 FT /codon_start=1 FT /product="P2 protein" FT /note="minor outer capsid protein" FT /db_xref="InterPro:IPR008580" FT /db_xref="UniProtKB/TrEMBL:Q5I747" FT /protein_id="AAW31874.1" FT /translation="MAYPNDVRNVWDVYNVFRDVPNREHLIRDIRNGLVTVRNLTNMLT FT NMERDDQLIIAQLSNMMKSLSIGVEKAQNELSKLKTTDADRAAVLAAYQTSVLNIERNT FT MLLTGYFKQLVLDLTGYVGASVYPILPFMITGDQSMMVDSIKVNMKNVFDDKHEQEIVL FT PIHPACFVSTITEDTSSVVYADGDELYSVHVRHADMTMYVNVLGETVETRQLSMIGDSI FT VPDDFAPSLLILRFSQDSVGEVFYLSHDNVKKFLGYSLEYTDKYSIFDVARRVSTTRNK FT IIDGFCSVDGVPYLDGRFIYQPSGISADSNICAIYNSYVLDVLRYITECEVDTLRSVYD FT RTSSTAFSKTDVLTSSLLTMQSNISALSAATPQLANDVITFDSTDLLSLGTVLTVSNEF FT TADDTTLSTSLAGHCQVDYSEGSPQDKSMSIPVSCDSSQLASSTVHSYSADILGHGLKG FT DRNMNLMINVPGLMNPQKVTVDYVYSDGYKLNFASVVAPDAPFWINATLQLSVSPSAHN FT MLSKLTPLDNDACPGLKAQANTPVLVSMTINLDDATPALGGEVIQNCVFKIHHGDDVYS FT FVTDFDVISYTSTSGTNCLKLISSVDITSQLPSDMVIYVMNGSPDAAFISGDSINMSSV FT DWHQSTSQTVGNYVYTTMKAYWNVTSYNVEARPYATYVPGKINFTAVDHADVFVDDYNT FT GVNSYVIVNSRIYYKGTPLYIEVPSGSFIKVSYFTSPLKNPTVDTYNAEISRNSAYLIK FT ANASLDSVAAMLNNISNRIDAMERLMEPTRAQQIAGVVSSIGGVISLGMPLLGAIVVTI FT GTIISIADPDKQGIDYHSVANAFMSWCQYAAVCRYEYGLLKRGDEKLDVLSFMPKRVVS FT DFKNKPDVISLPELGESVLRGSSTDYLDTGINIIYNDMQLLGQGKLSDWLNKTVSKVEN FT NAANFFERNLVKSLANKEVLPMHARVEITQTEKIGDVYRTTILYTGINEGSYLGGDVFA FT SRLGDKNILRMNGFESGPGRFNAIVESTTEVGNFRVVDWTVSGMSRYEIYAAAGEVYPS FT KDPSHADVQLLYESIVRDLTTRDGSFVLKHHDVLLLAGRLDAFEELIIKNASNYQYAFI FT GSNCQNYAHDVVDILTKFKRPQRWIKDDDFKLYIQSIYDAL" XX SQ Sequence 3511 BP; 968 A; 729 C; 818 G; 996 T; 0 other; ggcaaaacct cgccatggct tatcctaatg acgtcagaaa cgtttgggat gtgtacaacg 60 tgttccggga cgtgccaaac cgtgaacatc tgattcgaga tatccgcaat ggactggtta 120 cggtccggaa tctcacaaat atgcttacta atatggagcg cgatgatcaa ttgattattg 180 ctcaactgtc caatatgatg aaatcgttat caattggggt tgagaaggct caaaatgaac 240 ttagcaaact aaagactacg gatgccgacc gtgccgcagt cttagcagct tatcaaactt 300 cggttcttaa catagagcga aatactatgt tattgactgg gtacttcaag cagttagttt 360 tagacttaac tggttatgtg ggtgccagcg tatatcctat cttacctttc atgattacag 420 gagatcagtc tatgatggtt gactccatta aagttaacat gaaaaatgtc tttgatgata 480 agcatgagca ggagatagtc ctacctattc atcctgcttg ctttgtgtca accatcactg 540 aggacacttc ttccgtagta tacgccgacg gagatgaact gtattcagtg catgttagac 600 acgcagacat gactatgtat gtcaatgtgc ttggtgaaac cgtcgagacc aggcagctgt 660 ctatgatagg cgactccatc gttcctgatg atttcgcgcc ttccctgctg atattgagat 720 tcagtcaaga ttcagtcgga gaggttttct atcttagtca tgacaacgtg aaaaagtttc 780 taggctacag tcttgaatat accgacaagt acagtatatt tgacgtagcc agacgcgtgt 840 ccacgacgcg taacaaaata attgatggat tctgctctgt cgatggtgtg ccgtatcttg 900 atggacggtt catctatcaa ccgagcggaa ttagtgcgga tagtaatatc tgtgctatat 960 ataattcata cgttttagac gtgcttagat acattactga gtgtgaggtt gatacgttaa 1020 ggtcggtgta cgaccgaact tcgtcaactg cattctcaaa gaccgatgtc ttgacatcga 1080 gtctgctaac catgcaaagt aacatttcag ccctatctgc cgctaccccc caattggcga 1140 atgatgtgat cacgttcgat tctaccgatc tactttctct tgggacagta ttgaccgtgt 1200 cgaatgagtt tacagctgat gatacaacat tgagtactag tcttgcgggt cactgccaag 1260 ttgactacag cgagggatcg ccccaagaca agagcatgag tatacctgta agttgtgact 1320 cgtcgcagct tgcgtcatct accgtccact cttactcagc tgacatactg ggacatggac 1380 ttaagggtga ccgaaacatg aacttaatga taaatgtacc tggacttatg aacccccaga 1440 aagtaacggt tgattatgtc tattcggatg gctacaaact gaactttgct tcggtggttg 1500 cccctgacgc gcctttctgg attaacgcaa ctctgcaact tagtgtgtcg ccttctgcgc 1560 ataatatgct gagtaagtta acaccattgg ataatgatgc atgtcctggg cttaaagctc 1620 aggcaaatac gcctgtactt gtatccatga ccatcaatct tgatgacgcc actcctgctt 1680 taggaggaga ggtgattcaa aattgtgtgt ttaagataca ccacggcgat gatgtgtata 1740 gctttgtcac cgattttgat gtcataagtt atacctcaac gtccgggact aattgtttga 1800 agcttatatc aagcgtggac atcaccagtc agcttccctc tgatatggtg atctacgtga 1860 tgaatggatc gcctgatgcc gctttcatat ccggtgattc cattaatatg tcatcagtgg 1920 actggcacca gtccaccagc cagaccgtgg gaaattatgt ctataccacg atgaaggcct 1980 attggaatgt aacgtcgtat aatgttgagg ctcgtcctta cgccacgtac gtacctggaa 2040 aaattaactt tacggccgta gatcacgctg atgttttcgt agatgactat aacaccggcg 2100 ttaattcata tgtgatcgta aatagtagaa tatattataa gggaacccct ctatatattg 2160 aggtaccaag cggctcattc atcaaggtga gctacttcac aagccctttg aagaacccta 2220 ctgtggacac gtataacgct gaaatttctc gcaattcagc gtatctaatt aaagcaaatg 2280 cttcattaga ttcagtggcc gcaatgctaa acaatatatc gaatcgaatc gatgcgatgg 2340 aacgtttgat ggagcccaca cgtgcgcagc agattgcagg agtagtctca agcataggtg 2400 gagtcatctc actcggaatg ccattgctcg gagcgatcgt ggtaaccatc ggtaccatta 2460 tctccattgc tgacccagac aaacagggca ttgattacca ttcggtagcc aatgccttta 2520 tgtcctggtg tcagtatgcg gcagtctgta ggtatgaata tggacttctg aagcgtgggg 2580 atgagaaact agatgtgttg tcatttatgc cgaaacgtgt cgtgtcggat ttcaagaaca 2640 aacccgacgt tattagtctc ccagagctag gtgagtcagt actacgtgga tcgagcactg 2700 attatctaga tacggggatt aatatcatat ataatgatat gcaattactc ggacaaggca 2760 aactctccga ctggctcaac aaaactgtga gcaaggtgga gaataacgct gccaacttct 2820 ttgagaggaa tttggttaaa agtctagcga ataaggaggt cctaccaatg catgctcgag 2880 ttgagattac tcaaaccgag aaaattggtg atgtgtatag gaccacaatc ctatatacag 2940 ggataaatga aggatcgtat ttgggtggag atgtctttgc ttcgcggttg ggggacaaaa 3000 acatcttgcg tatgaatgga tttgagagcg gacctggaag gttcaatgct atcgtcgaat 3060 caactactga agtaggcaac tttcgtgtag ttgattggac ggtgtctgga atgtctaggt 3120 acgaaattta tgctgctgcc ggtgaagtat atccgagtaa agatccctct catgctgacg 3180 tacagctgct atacgagagc atagttcggg atttaaccac tcgggatggt agcttcgttt 3240 tgaagcatca tgatgtcctg cttctggctg ggcgacttga cgcttttgag gagctaatca 3300 taaaaaatgc ctctaattac caatatgcat ttattggttc aaactgtcaa aattatgcgc 3360 atgacgtggt tgacatcttg actaagttca aacgaccaca gaggtggatt aaagatgatg 3420 acttcaagtt gtacatccaa tctatctatg atgcattgtg atatgtacca gccagggctc 3480 agatgtatgc gtacttctga gttaaaatga t 3511 //