ID   AY839863; SV 1; linear; genomic RNA; STD; VRL; 1691 BP.
XX
AC   AY839863;
XX
DT   01-MAR-2005 (Rel. 83, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Papaya ringspot virus isolate PRSV-AP Ra polyprotein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1691
RA   Sreenivasulu M., Sai Gopal D.V.R.;
RT   "Sequence diversity in 3' terminal region of Papaya ringspot virus isolates
RT   from south India";
RL   Unpublished.
XX
RN   [2]
RP   1-1691
RA   Sreenivasulu M., Sai Gopal D.V.R.;
RT   ;
RL   Submitted (26-NOV-2004) to the INSDC.
RL   Department of Virology, S.V. University, Tirupati, Andhra Pradesh 517502,
RL   India
XX
DR   MD5; 88ff97058d635a845ed8cf8eb272afaa.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1691
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /isolate="PRSV-AP Ra"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1485
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5D7Q7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q5D7Q7"
FT                   /protein_id="AAX07287.1"
FT                   /translation="ITMYYALREGGYDTKAQEDMCVFYINGDDLCIAIHPDHEHILDSF
FT                   SSSFAELGLKYDFTQRHRNKQDLWFMSHRGILIDNIYIPKLEPERIVAILEWDKSKQPE
FT                   HRLEAITAAMIESWGYGELTHQIRRFYQWVLEQAPFNELARQGRAPYVSEVGLRRLYTS
FT                   ERGSMEELEAYIDKSFDRERGDAPELLVFHESKSLDDHQFICHVNEHVYHQSKTEAVDA
FT                   GLNDKLKEKEKEKEKKDKKDASDGGYVSTSTKTGERDRDVNAGTSGTFTVPRIKSFTDK
FT                   MILPRIKGKAVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRNDYGLSDDEMQVML
FT                   NGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLVEHATPSFRQIMAHFSNAAEAYI
FT                   AKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTNR
FT                   RMFGMDGNVSNKEENTERHTVEDVNRDMHSLLGMRN"
FT   mat_peptide     <1..582
FT                   /product="nuclear inclusion protein b"
FT   mat_peptide     583..1482
FT                   /product="capsid protein"
FT   3'UTR           1486..1691
XX
SQ   Sequence 1691 BP; 525 A; 314 C; 403 G; 449 T; 0 other;
     atcacaatgt attacgcact gcgggagggt ggttacgata caaaggctca agaagacatg        60
     tgtgtgtttt atatcaatgg tgatgatctc tgtatcgcca ttcacccaga tcacgagcat       120
     attcttgatt cattctctag ttcatttgct gagcttgggc ttaagtatga tttcacacaa       180
     agacatagga ataaacagga tctgtggttc atgtcgcatc gaggtattct gatcgacaat       240
     atttacattc cgaaactcga acctgagcga attgttgcaa ttcttgagtg ggacaaatcc       300
     aagcaaccag aacatcgctt ggaggcgatc acagcagcaa tgatagaatc atggggttat       360
     ggtgagctaa cacaccagat ccgcagattc taccaatggg tccttgagca agctccattc       420
     aatgagttag ctagacaagg gagagcccct tatgtctcag aagttgggtt gagaaggctt       480
     tatactagtg agcgtgggtc gatggaagaa ttggaagcat atattgataa atccttcgat       540
     cgggagcgtg gagatgctcc tgagctattg gttttccatg aatcaaaaag tttagatgat       600
     catcaattta tctgtcacgt gaatgaacat gtttatcatc aatccaagac tgaagcggtg       660
     gatgcaggtc tcaatgataa gctgaaggag aaggaaaaag aaaaagaaaa gaaagacaag       720
     aaagatgcta gtgacggagg ttatgtgtca actagcacaa aaactggaga gagagataga       780
     gatgtcaatg ctggaactag tggtacattc acagttccaa gaatcaaatc atttactgat       840
     aaaatgattc tacccagaat taaggggaaa gctgtcctta atttgaatca tcttcttcag       900
     tataacccac agcaaattga catctcaaac acccgtgcca cacaatcaca gtttgaaaag       960
     tggtatgagg gagtgaggaa tgattatggc cttagtgatg atgaaatgca agtgatgtta      1020
     aatggcttaa tggtttggtg tatcgaaaat ggtacatccc cagacatatc tggtgtctgg      1080
     gtcatgatgg atggtgagac tcaggtcgat tacccaatta aaccattagt tgaacatgca      1140
     actccttcat ttaggcaaat catggctcac ttcagtaacg cggcggaagc atatatcgcg      1200
     aagcgaaatg caactgagag atacatgccg cggtatggaa tcaagagaaa tttgactgac      1260
     attagcctcg ctagatatgc tttcgatttc tatgaggtga attcaaaaac acctgataga      1320
     gctcgagagg ctcatatgca gatgaaggca gctgcactgc ggaacacaaa tcgcagaatg      1380
     tttggaatgg acggcaatgt cagtaacaag gaagaaaaca cggagagaca cacagtagaa      1440
     gatgtcaata gagacatgca ctctctcctg ggtatgcgca actaaatatc cgtacttgtg      1500
     tgtttgtcgg gcctggctcg accctgtttc accttataat actatataag caatagaata      1560
     tagtgtggtt ttatcaccgt ttctatttta tagtgagggt agccctccat gcttttagta      1620
     ttattcgagt tctctgagtc tccatacagt gtgggtggcc cacgtgctat tcgagcctct      1680
     tagaatgaga g                                                           1691
//