Dbfetch
ID AY829113; SV 1; linear; genomic DNA; STD; VRL; 1320 BP. XX AC AY829113; XX DT 13-DEC-2004 (Rel. 82, Created) DT 13-DEC-2004 (Rel. 82, Last updated, Version 1) XX DE Tomato yellow vein streak geminivirus isolate IAC replication-associated DE protein (AC1) and coat protein (AV1) genes, partial cds. XX KW . XX OS Tomato yellow vein streak virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1320 RA Sawazaki H.E., SouzaDias J.A.C., Faria J.C., Siqueira W.J., Felcar G.N.; RT "Evidence that TYVSV is still the main geminivirus in tomato crops at RT Campinas, SP region"; RL Unpublished. XX RN [2] RP 1-1320 RA Sawazaki H.E., SouzaDias J.A.C., Faria J.C., Siqueira W.J., Felcar G.N.; RT ; RL Submitted (16-NOV-2004) to the INSDC. RL Molecular Biology, Instituto Agronomico, Barao de Itapura, Campinas, Sao RL Paulo 13020-902, Brazil XX DR MD5; 5d679c61dbd6ae02a1f878108e89bc0b. XX FH Key Location/Qualifiers FH FT source 1..1320 FT /organism="Tomato yellow vein streak virus" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="IAC" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:55216" FT gene complement(<1..687) FT /gene="AC1" FT CDS complement(<1..687) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="REP; AL1 protein" FT /db_xref="GOA:Q5MH30" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5MH30" FT /protein_id="AAV85989.1" FT /translation="MPPPKRFTVNAKNFFLTYPHCSLTKEETLSQLQALKTPTNKKFIR FT VTRELHEDGEPHLHVLIQFEGKFKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDFIDFGNFQIDGRSARGGSQTVNDTYAKVLNADNLSKALNILKEEQPRDYVLYLD FT KIQSHVQKIFAKAPAPWIPPFELSSFTNVPDEMQEWADEYFGRNAAARPERPISIIIEG FT DSRTGKT" FT gene 976..>1320 FT /gene="AV1" FT CDS 976..>1320 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP; AR1 protein" FT /db_xref="GOA:Q5MH29" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5MH29" FT /protein_id="AAV85990.1" FT /translation="MPKRDAPWRIMAGTTKVSRSSNFSPRGGIPKRDAWVNRPMYRKPR FT IYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRFCVKS FT VYILGKIWMDE" XX SQ Sequence 1320 BP; 339 A; 242 C; 318 G; 421 T; 0 other; tgtctttcca gtcctggaat caccctcaat gatgatacta ataggtctct ctggccgcgc 60 agcggcattt cttccgaaat actcatcagc ccactcctgc atctcatcag gaacgttagt 120 aaaggaagat aattcaaatg gagggatcca cggggctgga gcctttgcaa atattttttg 180 gacatgtgat tgtattttat ccaaataaag aacataatct ctaggttgtt cttcttttaa 240 tatatttagg gccttggata gattatctgc gtttagaacc tttgcataag tgtcattgac 300 agtttggctt cctcctctcg ctgatcgtcc atcgatctgg aaatttccaa aatcaatgaa 360 gtctccgtct ttctccatgt aggtcttgac gtcggacgag cttttagctc cctgaatgtt 420 tggatggaaa tgtgctgacc ttgttgggga taccaagtcg aagaatcgtt gattttggca 480 tttgaatttg ccttcgaatt gaataagcac atggagatga ggttccccat cttcgtgaag 540 ttctctggtt acacgaataa atttcttgtt tgttggtgtt ttaagtgcct gtaattggga 600 aagtgtttct tctttggtta atgaacaatg agggtatgta aggaagaaat tttttgcatt 660 tacagtgaaa cgctttggtg gtggcattgt tgtaaataag aagttgagac ccgatagctc 720 tccttcaaac ttggtgaaat gaattgggga atgggtctca atatatagta gagtccatta 780 tagaatctat ttgccacgtg gcggccatcc gttataatat taccggatgg ccgcgcgatt 840 tttttaagtg gtcccagtgt gagtgaccaa tcagattgtg tcctgaagtc ttatttattc 900 gaaatactaa ggcgctaagt tattaaagtt gtataaatta gacattcgta agtggtcgac 960 atactttaat tcgaaatgcc aaagcgggat gccccatggc gtataatggc ggggaccact 1020 aaagtatccc gctcttctaa tttttcacct cggggaggta tacccaagcg ggatgcttgg 1080 gtaaacaggc ccatgtacag gaagcccagg atatatcgta cgttgagagg gcctgatgtt 1140 cctaaagggt gtgaaggccc atgtaaggtt caatcctatg agcagcgtca tgacatttct 1200 catcttggca aggtgatgtg tatttccgat gtgacacgtg gtaatggtat tacacaccgt 1260 gttggtaagc gtttttgtgt taagtctgtg tacatattgg ggaagatatg gatggacgag 1320 //