ID AY823990; SV 1; circular; genomic DNA; STD; VRL; 2872 BP. XX AC AY823990; XX DT 11-FEB-2005 (Rel. 82, Created) DT 22-NOV-2014 (Rel. 122, Last updated, Version 6) XX DE Torque teno sus virus 1b isolate 1p, complete genome. XX KW . XX OS Torque teno sus virus 1b OC Viruses; Anelloviridae; Iotatorquevirus. XX RN [1] RP 1-2872 RX DOI; 10.1099/vir.0.80794-0. RX PUBMED; 15831945. RA Niel C., Diniz-Mendes L., Devalle S.; RT "Rolling-circle amplification of Torque teno virus (TTV) complete genomes RT from human and swine sera and identification of a novel swine TTV RT genogroup"; RL J. Gen. Virol. 86(Pt 5):1343-1347(2005). XX RN [2] RP 1-2872 RA Niel C., Diniz-Mendes L., Devalle S.; RT ; RL Submitted (12-NOV-2004) to the INSDC. RL Virology, Oswaldo Cruz Institute, Av. Brasil, 4365, Rio de Janeiro, RJ RL 21045-900, Brazil XX DR MD5; 4a4274bb01d06c0717f4910cba4bf52a. DR EuropePMC; PMC3047579; 21407810. DR EuropePMC; PMC3302375; 22171250. DR EuropePMC; PMC3818428; 24223918. DR EuropePMC; PMC5508382; 28725107. XX FH Key Location/Qualifiers FH FT source 1..2872 FT /organism="Torque teno sus virus 1b" FT /host="swine" FT /isolate="1p" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:687387" FT CDS join(428..642,2008..2479) FT /codon_start=1 FT /product="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q5ENW9" FT /protein_id="AAW79283.1" FT /translation="MPEHWEEAWLEATKGWHDLDCRCGNWQDHLWLLLADGDAALAAAV FT DAIERDAMAGDDATTATGRVTIGDDGCLEVNTNPPQESGIHALIHQPILCRSQEVLHTP FT NSPEKEECSRKQTVGVSLLPLPEPSVQIHPQRQRKVHFSEGTRKRKERKPRKPRHRPVS FT RVPKALLREMDRLMMKRQSDAEGGPGSDSDEWSESSLTDEWTTSDSDFIDTPIRERCLN FT KKQKKR" FT CDS 428..646 FT /codon_start=1 FT /product="ORF2" FT /db_xref="UniProtKB/TrEMBL:Q5ENW8" FT /protein_id="AAW79282.1" FT /translation="MPEHWEEAWLEATKGWHDLDCRCGNWQDHLWLLLADGDAALAAAV FT DAIERDAMAGDDATTATGRVTIGDDGW" FT CDS 517..2430 FT /codon_start=1 FT /product="ORF1" FT /db_xref="GOA:Q5ENW7" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:Q5ENW7" FT /protein_id="AAW79281.1" FT /translation="MAPTRRWRRRFGRRRRRYRKRRYGWRRRYYRYRPRDYRRRWLVRR FT RRRSVYRRGGRRARPYRLFNPKVMRRVVIRGWWPILQCLKGQEALRYRPLQWDTERQWR FT VRSDFEDQYGYLVQYGGGWGSGDVTLEGLYQEHLLWRNSWSKGNDGMDLVRYFGCVVYL FT YPLKDQDYWFWWDTDFKELYAENIKEYSQPSVMMMAKRTRIVIARERAPHRRKVRKIFI FT PPPSRDTTQWQFQTDFCNRKLFTWAAGLIDMQKPFDANGAFRNAWWLEQRNDQGEMKYI FT ELWGRVPPQGDSELPKKKEFSTGTDNPNYNVQDNEEKNIYPIIIYVDQKDQKPRKKYCV FT CYNKTLNRWRLGQASTLKIGNLKGLVLRQLMNQEMTYIWKEGEYSAPFVQRWKGSRFAV FT IDARKADQENPKVSTWPIEGTWNTQDTVLKDVFGINLQNQQFRAADFGKLTLPKSPHDL FT DFGHHSRFGPFCVKNEPLEFQVYPPEPTNLWFQYRFFFQFGGEYQPPTGIRDPCVDTPA FT YPVPQSGSITHPKFAGKGGMLTETDRWGITAASSRALSADTPTEAAQSALLRGDSEAKG FT EETEETASSSSITSAESSTEGDGSSDDEETIRRRRRTWKRLRRMVREQLDRRMDHKRQR FT LH" XX SQ Sequence 2872 BP; 872 A; 658 C; 783 G; 545 T; 14 other; tacactttgg ggttcaggag gctcaatttg gctcgcttcg ctcgcaccac gtttgctgcc 60 aggcggacct gattgaagac tgaaaaccgt taaattcaaa attgaaaagg gcgggcaaaa 120 tggcggacag ggggcggagt ttatgcaaat taatttatgc aaagtaggag gagctcgatt 180 ttaatttatg caaagtagga ggagtcaaat ctgattggtc gggagctcaa gtcctcattt 240 gcatagggtg taaccaatca gaattaaggc gttcccacga aagcgaatat aagtaggtga 300 ggttccgaat ggctgagttt atgccgccag cggtagacag aactgtctag cgactgggcg 360 ggtgccggag gatccctgat ccggagtcaa ggggcctatc gggcaggagc agctaggcgg 420 agggcctatg ccggaacact gggaggaagc ctggttggaa gctaccaagg gctggcacga 480 tctcgactgc cgctgcggta actggcagga ccacctatgg ctcctactcg ccgatggaga 540 cgccgctttg gccgccgccg tagacgctat agaaagagac gctatggctg gagacgacgc 600 tactaccgct acaggccgcg tgactatcgg cgacgatggc tggtaaggag aaggcggcgt 660 tccgtctacc gtagaggtgg acgtagagcg cgcccctacc gactgtttaa tccaaaagta 720 atgcggagag tagtaattag ggggtggtgg cctattttac aatgcttaaa aggacaggag 780 gcactaagat atagacctct acagtgggac acagagagac agtggagagt gagatcagac 840 ttcgaagacc agtacggata cctcgtacaa tacgggggag gttggggaag tggtgatgtg 900 acacttgaag gtctctacca agagcactta ttgtggagaa actcttggtc taaaggaaac 960 gatggaatgg acctagtaag atactttgga tgtgtagtat acctatatcc actaaaggac 1020 caggactatt ggttctggtg ggacacggac ttcaaagaat tatatgcaga aaacataaag 1080 gaatacagcc aaccatcagt aatgatgatg gcaaaaagaa caagaatagt aatagccaga 1140 gaaagggcac cacatagaag aaaagtaaga aaaatattta ttccgccacc ttcgagagac 1200 acaacacagt ggcagtttca gacagatttc tgcaatagaa agttatttac gtgggcagct 1260 ggtctaatag acatgcaaaa accgttcgat gctaatggag cctttagaaa tgcttggtgg 1320 ctggaacaga gaaatgatca gggagaaatg aaatacatag aactgtgggg aagagtaccc 1380 ccacaaggag attcagagct gcccaaaaaa aaagaattct ccacaggaac agataaccca 1440 aactacaatg ttcaggacaa tgaggagaaa aacatatacc ccattataat atacgtagac 1500 caaaaagatc aaaaaccaag aaaaaagtac tgcgtatgtt ataataagac cctcaacaga 1560 tggagactag gacaggcaag tactctaaag ataggaaacc tgaaaggact agtactaaga 1620 cagctgatga atcaagaaat gacgtatata tggaaagaag gagaatacag tgcccccttt 1680 gtacaaaggt ggaaaggcag cagattcgct gtgatagacg caagaaaggc agaccaagaa 1740 aacccgaaag tatcaacatg gccaattgag ggaacgtgga acacacagga cacagtactg 1800 aaggatgtat tcggtattaa cttgcaaaat caacaattta gggcggcgga ctttggtaaa 1860 ctcacactac caaaatcacc gcatgactta gacttcggtc accacagcag atttgggcca 1920 ttttgtgtga aaaatgaacc actggagttt caggtatacc ctccagaacc aactaacttg 1980 tggtttcagt acagattttt ctttcagttt ggaggtgaat accaaccccc cacaggaatc 2040 cgggatccat gcgttgatac accagcctat cctgtgccgc agtcaggaag tattacacac 2100 cccaaattcg ccggaaaagg aggaatgctc acggaaacag accgttgggg tatcactgct 2160 gcctcttcca gagccctcag tgcagataca cccacagagg cagcgcaaag tgcacttctc 2220 cgaggggact cggaagcgaa aggagaggaa accgaggaaa ccgcgtcatc gtccagtatc 2280 acgagtgccg aaagctctac tgagggagat ggatcgtctg atgatgaaga gacaatcaga 2340 cgcagaagga ggacctggaa gcgactcaga cgaatggtca gagagcagct tgaccgacga 2400 atggaccaca agcgacagcg acttcattga cacccccata agagaaagat gcctcaataa 2460 aaaacaaaag aaacgctaaa cagtgtccga ttactaatgg gggggggtcc ggggggggct 2520 tgcccccccg caagctgggt taccgcacta actccctgcc aagtgaaact cggggacgag 2580 tgagtgcggg acatcccgtg taatggctac ataactaccc ggctttgctt cgacagtggc 2640 cgtggctcga ccctcacaca acactgcagg tagggggcgc aattgggatc gttagaaaac 2700 tatggccgag catgggggnn nnnnnnnnnn nnccaacccc cccggtgggg gggccaaggc 2760 cccccctaca cccccccatg gggggctgcc gccccccaaa ccccccgcgt cggatggggg 2820 gggctgcgcc ccccccaaac cccccttgcc cggggctgtg ccccggaccc cc 2872 //