ID   AY823986; SV 1; linear; genomic RNA; STD; VRL; 1827 BP.
XX
AC   AY823986;
XX
DT   05-DEC-2005 (Rel. 86, Created)
DT   08-DEC-2005 (Rel. 86, Last updated, Version 4)
XX
DE   Indian cardamom mosaic virus isolate SKP-3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Indian cardamom mosaic virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1827
RA   Smitha R., Krishna Reddy M.;
RT   "Genetic diversity of Cardamom mosaic virus infecting cardamom";
RL   Unpublished.
XX
RN   [2]
RP   1-1827
RA   Smitha R., Krishna Reddy M.;
RT   ;
RL   Submitted (12-NOV-2004) to the INSDC.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
DR   MD5; 5a7051e7db40aa00bfabe7a446808ba1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1827
FT                   /organism="Indian cardamom mosaic virus"
FT                   /host="cardamom"
FT                   /isolate="SKP-3"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Lakshmipura, Sakaleshpur, Karnataka"
FT                   /note="biotype: chlorotic streaks"
FT                   /db_xref="taxon:152006"
FT   CDS             <1..1587
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q2VTA2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q2VTA2"
FT                   /protein_id="AAX31143.1"
FT                   /translation="GNNSGQPSTVVDNTLILMMSFYYAYIMKTQDFNCECLNDCMRFVC
FT                   NGDDNKFSLAPNFVERYGGEFTTEIKQLGLTYEFDDLTEDITENPYMSLTMVRTCSGIG
FT                   FSLHPSRVVAIVQWIKKGDIIQATQAAFAAMVEAYNDPWLFSILHLYLVWLIIEYKDAL
FT                   NFARVNGIFGVVYMDPCQVHALHYGIPTANELKEDEDYDDDSDEDLKIVESCSQQFQMD
FT                   LVGTPTAPRQGSTIAPASTSGTASTNLPGSGGARTAPLAPITGQQHVENPLQPVESFGA
FT                   QQQDFAPSGGDDDTDIQWRIPPTPRRLSHFNNPRVKGKRIWNRKIINSIAKEQFTQSSQ
FT                   LATTLQFEKWAEDVRKSLGTPNEDDFQIYLTSWCLWCANNGTSSEVDVNQNMEIHSGGK
FT                   YSTIPIAIFVEPAVQNGGLRKIMRHLSDITSQILAKGGKMTAWGTKRGYTQLAMIPYAF
FT                   DFCVQTNGMPKTVREQLNQGKAAAIGSGYQRVMLLDGKVQRSKTSYERHVDTDVDEFEH
FT                   GSMGEPRATLY"
FT   mat_peptide     1..660
FT                   /product="NIb"
FT                   /note="nuclear inclusion body protein"
FT   mat_peptide     661..1584
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT   3'UTR           1588..1812
XX
SQ   Sequence 1827 BP; 586 A; 353 C; 414 G; 474 T; 0 other;
     ggtaacaata gtgggcagcc aagcacagtc gttgacaaca cgttgatctt gatgatgtca        60
     ttttattacg cttacattat gaagacacaa gattttaatt gtgagtgttt aaatgattgc       120
     atgcggttcg tttgtaatgg ggatgacaac aaattctcac tggctccaaa ttttgttgag       180
     agatatggag gagaattcac aactgagatc aaacaacttg gtttaacata tgaatttgat       240
     gatctcacag aagatataac agagaaccct tacatgagtt tgacaatggt ccggacatgt       300
     agtggcatcg gtttttcttt acatccttct agagttgttg ccattgttca gtggataaag       360
     aaaggagaca taattcaagc aacacaagca gcatttgcag caatggtgga agcatataac       420
     gacccatggt tgtttagcat tctacatctt tatttagttt ggttaattat tgaatataaa       480
     gatgctttaa attttgccag ggtcaatggc atttttggtg ttgtgtatat ggatccgtgc       540
     caagttcacg cattgcacta tggcattcca acagcaaatg agcttaaaga ggacgaggat       600
     tacgacgatg acagtgatga agacctgaaa attgtagagt cttgttccca gcaatttcag       660
     atggatctgg ttggaacacc aacagcccca agacaaggta gcacaatagc accagcaagt       720
     acatctggca cagccagcac taatctacca ggcagtggcg gagccaggac agcaccactt       780
     gcaccaataa caggccagca acatgtggaa aacccgctgc aaccggttga gagctttggt       840
     gctcagcaac aagattttgc acctagcggc ggtgatgacg acacggacat tcagtggaga       900
     atacccccaa cgccaaggag gttgagtcac ttcaacaacc cacgcgtgaa aggtaaaagg       960
     atttggaaca gaaagataat caacagcatc gcaaaggaac agttcacaca atcatcacaa      1020
     ctagcaacaa ctttgcagtt tgagaaatgg gctgaagatg ttaggaagag tcttggcaca      1080
     ccaaatgaag atgactttca aatctattta acatcatggt gtttgtggtg tgccaacaac      1140
     ggaacctctt cagaagtcga cgtcaaccaa aacatggaaa ttcactcagg tgggaagtac      1200
     tccacaatac caatcgccat ctttgttgaa ccagcagtgc aaaacggagg gcttcggaaa      1260
     attatgagac atctcagtga tattacatca caaatactag ccaaaggagg aaagatgacg      1320
     gcatggggaa caaagagagg ttacacacag cttgcaatga taccatacgc ttttgatttt      1380
     tgcgtccaaa cgaatgggat gcccaaaaca gttcgcgagc aattgaatca aggaaaagct      1440
     gctgcaattg gttcgggtta ccagcgagtg atgctactag atgggaaagt ccagcgaagc      1500
     aagacgagtt atgagagaca tgtcgacact gatgtcgacg aatttgaaca tggctcaatg      1560
     ggtgagccac gagcaactct atattgaaca tatcagtatg tcaatttagt gtgtttacta      1620
     atatgcactt attttatata attagatgtt ttcttttctt gttcgctgtg tctataggtt      1680
     caatgggagt ttttgtgggt tttcttccaa cgcctagtaa ccctcaacac agcattttaa      1740
     ggttgttctg gaggaacacc tggcaacgca cttgcgtagt ttatcctatt accgtagaag      1800
     gttataaaat aaaaaaaaaa aaaaaaa                                          1827
//