ID   AY823985; SV 1; linear; genomic RNA; STD; VRL; 1828 BP.
XX
AC   AY823985;
XX
DT   05-DEC-2005 (Rel. 86, Created)
DT   08-DEC-2005 (Rel. 86, Last updated, Version 4)
XX
DE   Indian cardamom mosaic virus isolate SKP1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Indian cardamom mosaic virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1828
RA   Smitha R., Krishna Reddy M.;
RT   "Genetic diversity of Cardamom mosaic virus infecting cardamom";
RL   Unpublished.
XX
RN   [2]
RP   1-1828
RA   Smitha R., Krishna Reddy M.;
RT   ;
RL   Submitted (12-NOV-2004) to the INSDC.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
DR   MD5; 732b5f070aa2d0f979bb82212ff2d25b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1828
FT                   /organism="Indian cardamom mosaic virus"
FT                   /host="cardamom"
FT                   /isolate="SKP1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Lalshmipura, Sakaleshpur, Hassan district"
FT                   /isolation_source="infected cardamom leaves"
FT                   /note="biotype: mosaic"
FT                   /db_xref="taxon:152006"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q2VTA3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q2VTA3"
FT                   /protein_id="AAX31142.1"
FT                   /translation="GNNSGQPSTVVDNTLILMMSFYYAYIMKTQDFNCECLNDCMRFVC
FT                   NGDDNKFSLAPDFVERYGGEFTTEIKQLGLTYEFDDLTEDITENPYMSLTMVRTCSGIG
FT                   FSLHPSRVVAIVQWIKKGDIIQATQAAFAAMVEAYNDPWLFSILHLYLVWLIIEYKDAL
FT                   NFARVNGIFGVVYMDPCQVHALHYGIPTANELKEDEDYDDDSDEDLEIVEFCSQQFQMD
FT                   LVGTPTAPRQGSTIAPASTSGTASTNLPGSGGTRTAPLAPITGQQHAENPPQPIESFDA
FT                   QQQDFAPSGGDDDTDIQWRIPPTPRRLSHFNNPRVKGKRIWNRKIINSIAKEQFTQSSQ
FT                   LATTLQFEKWAEDVRKSLGTPNEDDFQNLFNIMVFVVCQQPEPLQKSDVNPKHWKIHSG
FT                   GKYSTIPIAIFVEPAVPNGGLRKIMRHLSDITSQILAKGGKMTAWGTKRGYTQLAMIPY
FT                   AFDFCVQTNGMPKTVREQLNQGKAAAIGSGYQRVMLLDGKVQRSKTSYERHVDTDVDEF
FT                   EHGSMGEPQATLY"
FT   mat_peptide     1..660
FT                   /product="NIb"
FT                   /note="nuclear inclusion body protein"
FT   mat_peptide     661..1590
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT   3'UTR           1594..1812
XX
SQ   Sequence 1828 BP; 587 A; 357 C; 408 G; 476 T; 0 other;
     ggtaataaca gtgggcaacc aagcacagtc gttgacaaca cgttgatctt gatgatgtca        60
     ttttattacg cttacattat gaagacacaa gattttaatt gtgagtgttt aaatgattgc       120
     atgcggtttg tttgtaatgg ggatgacaac aaattctcac tggctccaga ttttgttgag       180
     agatatggag gagaattcac aactgagatc aaacaacttg gtttaacata tgaatttgat       240
     gatctcacgg aagatataac agagaaccct tacatgagtt tgacaatggt ccggacatgt       300
     agtggcatcg gtttttcttt acatccttct agagttgttg ccattgttca gtggataaag       360
     aaaggagaca taattcaagc aacacaagca gcatttgcag caatggtgga agcatataac       420
     gacccatggt tgttcagtat tctacatctt tatttagttt ggttaattat tgaatataaa       480
     gatgctttaa attttgccag ggtcaatggc atttttggtg ttgtgtatat ggatccgtgc       540
     caagttcacg cattgcacta tggcattcca acagcaaatg agcttaaaga ggacgaggat       600
     tacgacgatg acagtgatga agaccttgaa attgtagagt tttgttccca gcaatttcag       660
     atggatctgg ttggaacacc aacagcccca agacaaggta gtacaatagc accagcaagt       720
     acatctggca cagccagcac taacctacca ggcagtggcg gaaccaggac agcaccactt       780
     gcaccaataa caggccagca acatgcggaa aacccgcctc aaccgattga aagctttgat       840
     gctcagcaac aagattttgc acctagcggc ggtgatgacg acacggacat tcagtggaga       900
     atacccccaa caccaaggag gttaagtcac ttcaacaacc cacgcgtgaa aggtaaaagg       960
     atttggaaca gaaagataat caacagcatc gcaaaggaac agttcacaca atcatcacaa      1020
     ttagcaacaa ctttgcagtt tgagaaatgg gctgaagatg ttaggaagag tcttggcaca      1080
     ccaaatgaag atgactttca aaatctattt aacatcatgg tgtttgtggt gtgccaacaa      1140
     ccggaacctc ttcagaagtc cgacgtcaac ccaaaacatt ggaaaattca ctcaggtggg      1200
     aagtactcca caatacccat cgccattttt gttgaaccag cagtgccaaa cggagggctt      1260
     cggaaaatta tgagacatct cagtgatatt acatcacaaa tactagccaa aggaggaaaa      1320
     atgacggcat ggggaacaaa gagaggttac acacagcttg caatgatacc atacgctttt      1380
     gatttttgcg tccaaacgaa tgggatgccc aaaacagtgc gcgagcaatt gaatcaagga      1440
     aaagctgctg caattggttc aggttaccag cgagtgatgc tactagatgg gaaggttcag      1500
     cgaagcaaga cgagttatga gaggcatgtc gacactgatg tcgacgaatt tgaacatggc      1560
     tcaatgggtg agccacaagc aactctatat tgaacatatc agtatgtcaa tttagtgtgt      1620
     ttactaatat gcacttatct tatataatta gatgttttct tttcttgttc gctgtgtcta      1680
     taggttcaat gggagttttt gtgggttttc ttccaacgcc tagtaaccct caacacagca      1740
     ttctaaggtt gttctggagg aacacctggc aacgcacttg cgtagtttat cctattaccg      1800
     tagaaggtta taaaaaaaaa aaaaaaaa                                         1828
//