ID AY805074; SV 1; circular; genomic DNA; STD; VRL; 7650 BP. XX AC AY805074; XX DT 11-FEB-2005 (Rel. 82, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Banana streak Mysore virus, complete genome. XX KW . XX OS Banana streak MY virus OC Viruses; Ortervirales; Caulimoviridae; Badnavirus. XX RN [1] RP 1-7650 RX DOI; 10.1007/s00705-004-0471-z. RX PUBMED; 15785970. RA Geering A.D., Pooggin M.M., Olszewski N.E., Lockhart B.E., Thomas J.E.; RT "Characterisation of Banana streak Mysore virus and evidence that its DNA RT is integrated in the B genome of cultivated Musa"; RL Arch. Virol. 150(4):787-796(2005). XX RN [2] RP 1-7650 RA Geering A.D.W.; RT ; RL Submitted (01-NOV-2004) to the INSDC. RL Horticulture and Forestry Science, Queensland Department of Primary RL Industries and Fisheries, 80 Meiers Road, Indooroopilly, Queensland 4068, RL Australia XX DR MD5; cfe226bdc8fc84657a9de56070d9175e. XX FH Key Location/Qualifiers FH FT source 1..7650 FT /organism="Banana streak MY virus" FT /host="Musa spp. cv. Mysore" FT /mol_type="genomic DNA" FT /country="Australia" FT /db_xref="taxon:1476909" FT CDS 568..1098 FT /codon_start=1 FT /product="ORF I protein" FT /db_xref="InterPro:IPR010746" FT /db_xref="UniProtKB/TrEMBL:Q5EP44" FT /protein_id="AAW80646.1" FT /translation="MDTYWDKTFENYKNSHTKSIADLEYLNLAGIEKVSNKDLAHNLHV FT NTYRSDLGFKVVIASLTKERKLNLQNKEELEKLHKKLELFGDLDKIVRSQRTELKKANQ FT SLEDLNRELQALRSDYLSRCPLSKKDVEELVLRISEQPKLVEQQTEALTRELSEKVDKV FT EALIHRLEKVIIG" FT CDS 1095..1493 FT /codon_start=1 FT /product="ORF II protein" FT /note="virion associated protein" FT /db_xref="UniProtKB/TrEMBL:Q5EP43" FT /protein_id="AAW80647.1" FT /translation="MSLANTKASPLYKEAISATSNGWEEQGVGFTERGTASLAILTRQL FT NTLIYSVVKIKDDIEGLKEEVTQIHQRVKSIEKKSGQSSEGAPDYKADLDEITKRLSSL FT TIQGDKIREVGGNLKVFKNPYEILRSLQ" FT CDS 1490..7099 FT /codon_start=1 FT /product="ORF III polyprotein" FT /note="encodes movement protein, coat protein, aspartic FT protease, reverse transcriptase and RNase H" FT /db_xref="GOA:Q5EP42" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR002156" FT /db_xref="InterPro:IPR018061" FT /db_xref="InterPro:IPR021109" FT /db_xref="InterPro:IPR036875" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/TrEMBL:Q5EP42" FT /protein_id="AAW80648.1" FT /translation="MTTRRSSLPTVTETMGPSTSGRDGTPLIEDQIRDYRASARRRYEA FT QRVARNIGNVGRRLIGRQTREDTLALLMDPEVELQRSMRERARTVPAEVLYMSRRDDVH FT HRVYHFRSEERMMVSDADQQDRTFISEESFERLQQAGLTYIHLGVLQVRFQILHRTFAG FT TMALLVFRDTRWTADDRSIISAMEVDLAEGNQLIYVIPNIMMTIGDFYRHIQISIRTRG FT YDSWEGGEANLLITRSVTARLSNTSNVGFAYRIDRVAEYLRTKGVRAIDATKHDARRFQ FT HGEWNLRPSTAVVPVQPTSITSAVNYDRSISLRFGDYQAASSSRPPVYNKNDDEVDSDE FT ETFQINMVLLGDDMDYPMFRELEKLYITSESMVGEDDEEEKSEDLDDEEAHADFQKFLN FT YSDEVNTIQDFLNQYDADISEDEANYDVGVLEEYPELLKLENNLAEIPILSEVTSQYRP FT ADIDMAGPTGYAPATSQQGLLGSTAPDRLGKGSFKWKSPTEYFNLPSAQQQAGAMFVMP FT ANFDPKVFERWESITLNHMADKVFSTAEDKLIYLENLLGEAEKIMFQSWRMTYANEYEE FT MKGQALGNNGTQNLLSQIRRIFYLEDPKTGTTVSQDAAYKAIKSLVCHEMTGTAIKRYM FT ADYWTLAAKTGRIWQGPELSDEFFTKLPSGLGDRVAKAFKEKYPGNTVGVPARITFTQL FT YLEELCREAAYQRSLKNLDFCREFPIPGYYKKPGRKFGVRKSTSYKGKPHKTHIKIDKR FT KYLRNKKCKCYACGEEGHYASECRNPRKLMERVSVLQDLELGKDMEIVSVEENETELSD FT IYSISEGEESGPPKSEIMSLELFMLHEIEDEPEAYLIGATDTWRNQMKVSRKEYYCQHE FT WDHTTKVVERCRACTYYITSQPRIKCTKCKIPICNLCTNYCYGIKMADEKEKEKEKEKE FT SDLLGLVNNCREIMAKYRTEKEVLLEELNNALKQAKEYKEKFEHLEGICEEQEAENKAL FT AQENQDLKEKVEELKEENEILKDQNTTMGQEMVKIQEKQQEAEKFLRREIKRREQANTE FT KLALMMNEVCTEREYEYQINATTVQNNLYNIKIGLEVDGEKKFLNAILDTGAATCVVSQ FT AKVSERFLEPSAMKVELRGVNGTSKVNKVLKEGKIWIGNQYFRLPRTYALEIELSGGID FT MIIGTNFLRAMSGGVRIEGETVTFYKIVTTTDAPKVPHQINLIEELEMSEEEFIEVQIS FT TSTEGYINKEIMDSKLFKELKDQGYIGEEPLKHWQKNMVKCKLELKNPDITIQDKPLKH FT VTAKMRETMRAHIDKLLQLKVIRPSSSRHRTTAMIVESGTEVDPKTGQEKRGKERLVFN FT FKRLNDNTEKDQYSLPGINTIISRIGNAKVYSKFDLKSGFHQVAMDPESIPWTAFLANN FT ELYEWLVMPFGLKNAPAIFQRKMDTCFKGTEAFIAVYIDDILVFSETEQLHRDHLRKFL FT EISKANGLILSPTKMKIGVKTIDFLGASIGNSKIKLQPHIIKKIADFDDHRLKETKGLR FT AWLGILNYARNYIPNLGKTLGPLYSKISPNGEKRMNAQDWALVTQVKRQVQNLPELELP FT PEKCKMVIETDGCMEGWGGVCKWTTVGKAQEKVCAYASGKFTPIKSTIDAEVQAVINSL FT DKFKIYYLDKKELLIRTDCEAIVRFYKSTAQNKPSRVRWLMLTDFISGTGLEIKFEHIN FT GCENILADSLSRLVQTLLQGWQHQHLNGILLALEELYQKPNPEVAKKIGQIIMKVLEKP FT AGIQINMITEGPKLRCACGKDAEIAVSHTSRNPDRPFYKCQRNLCHIWIWKDLVDDYFQ FT NLTAWNRISEEHRREMAREEGQNLEEEDYWENVFNEVFDHEEITEFYPDGGDPG" XX SQ Sequence 7650 BP; 2625 A; 1540 C; 1728 G; 1757 T; 0 other; tggtatcaga gcagggttca ctgtaagtaa atttatggct ttcatggggt aattccctag 60 gataggagcc taagggctct ttttatgcat atttctgaat ttctgttaag actatgcttt 120 atatactctg aagcgaattt ctggcaagta agttttaaga agtagatggt aataccttat 180 gaggagtaat actacatatc tagactaagg aatgtcttag gaaagaggcg atgagaagat 240 aaggtgacta ctgggaatag acgtaagccc attgtaagtc ccgaggaagg gcagcttgtg 300 gcaaaaaggt gactcagtat aacctgaaga tatcgcgtct ctgtctaatt taatatcctg 360 agactcctaa aatccggata tgatagtaaa actctgataa agcaaaagcc tgaagcttcg 420 aaatacctgc tagccagaga taaactaagg aaattataaa gccgtgctct taactttaat 480 ttacaagaaa aatgcataaa taacccgaag gttctttatc ctgcttcaaa gcctttagtt 540 tacttaaacc ttgaaccaaa gctaattctg gatacttact gggataaaac ctttgaaaat 600 tacaagaact ctcatactaa gtcaattgca gatcttgaat atttgaactt agcaggaatt 660 gaaaaggtct caaataaaga cctagcacat aacttgcacg ttaatactta tagaagtgat 720 cttggattta aagttgttat tgcatcactt actaaggaaa gaaagttaaa tttgcaaaat 780 aaagaagagc ttgaaaaact tcacaagaag cttgaactgt ttggagatct agacaagatt 840 gtcagatccc aaagaactga actcaaaaag gctaatcaaa gccttgagga cttaaacagg 900 gaactgcaag ccctgcgttc tgactatctc tccaggtgcc ctctatcaaa gaaggacgta 960 gaagaacttg ttctacgtat cagtgagcag ccaaagctcg ttgaacaaca aacagaggcc 1020 ttgacaagag agctctctga aaaggttgac aaggtggagg cccttatcca ccgtctggag 1080 aaagttatta ttggatgagt ctagccaaca ccaaggctag cccgctttac aaggaagcca 1140 tatctgctac atccaacggc tgggaagaac aaggcgtagg atttactgaa aggggaactg 1200 catcccttgc tattctgacg cgccaactca acaccctcat ttactcggtg gtcaaaatca 1260 aagacgacat cgaaggacta aaagaagaag ttacccaaat ccaccaaagg gtaaaatcaa 1320 ttgagaagaa atcagggcaa tcatcagaag gagcccctga ttacaaggcg gacttggacg 1380 aaatcaccaa aagactaagt tctctcacta ttcagggaga caagatccga gaagtaggag 1440 gcaatctcaa agttttcaaa aatccctacg aaattctaag atccctacaa tgacaactcg 1500 aaggtccagt ctacccacgg tgaccgaaac aatgggtccc agtacatctg gaagagatgg 1560 gaccccactt attgaagacc aaattagaga ttaccgggca tccgcaagga gacggtatga 1620 agcacaacga gttgccagaa acatcggcaa cgtcggaagg agactcatcg ggaggcaaac 1680 ccgagaggat accctggccc tactcatgga cccggaagta gagttacaaa gatctatgcg 1740 ggaacgagca agaacagtcc ccgccgaagt attatacatg tcaagacgag atgacgttca 1800 ccatcgcgtc taccacttca gatctgagga gcgaatgatg gtcagtgacg ctgaccaaca 1860 agatcggaca ttcatttctg aagaatcttt cgaaagacta caacaagctg gactcacgta 1920 tatacatctt ggagtcctgc aagtccggtt ccagatcctt cataggacct ttgctggaac 1980 tatggcgctc ctggtgttcc gagacaccag atggacggct gatgatcggt ctatcatatc 2040 agccatggaa gtggacctag ctgaaggcaa tcagctaatc tatgtcatcc ccaacataat 2100 gatgactatt ggagacttct accgacatat tcaaatctcc atacgcacaa ggggatatga 2160 ttcttgggaa ggaggcgagg cgaacctcct tatcacccga agcgtaacag ctaggctttc 2220 caacacatcc aatgttggat tcgcctaccg tattgatcga gtagctgaat acctcaggac 2280 gaagggggta agggctatcg acgccacaaa gcatgatgcg agaagattcc aacacgggga 2340 atggaattta agaccatcta cggctgtagt acccgtacaa cccacaagca tcacatctgc 2400 tgttaattat gaccgcagta tatcgctacg atttggggac taccaagcgg catcctcatc 2460 cagaccacca gtctacaaca agaatgatga cgaggtagac tctgatgaag aaacttttca 2520 aattaatatg gttttactcg gagatgatat ggactacccc atgttccgag agcttgagaa 2580 gttatatata acttctgaaa gcatggtggg ggaggatgat gaggaagaaa aatcagaaga 2640 tcttgatgat gaggaagctc atgctgattt ccaaaaattc ctcaattatt ctgatgaagt 2700 aaatacaatt caagatttcc tcaatcaata tgacgcagac atctctgaag atgaagcaaa 2760 ttatgatgta ggagttctgg aagaatatcc agaattactg aaattggaaa ataacctggc 2820 agaaatcccc atactcagcg aggtcacatc ccagtacaga cctgcagaca ttgacatggc 2880 cggcccaact ggatatgccc cggctacgtc tcagcaagga ctattaggct caacagcacc 2940 tgatcgtttg ggcaaaggct cttttaaatg gaaaagccca actgagtact ttaacttacc 3000 ctcagcccaa caacaagctg gagcgatgtt cgtaatgcca gcaaattttg accccaaagt 3060 atttgaaaga tgggagtcga tcacgctaaa ccacatggcg gataaggtct tctccactgc 3120 tgaagacaaa ctcatatact tggaaaatct acttggagaa gcagagaaga tcatgttcca 3180 aagttggcga atgacctatg caaacgaata cgaagagatg aagggtcaag ccctagggaa 3240 caacggtaca caaaatctac tctctcaaat ccgtagaatc ttttatctag aagatcccaa 3300 aactggaact acggtatccc aagatgcggc ttacaaggca atcaagagcc tagtatgcca 3360 tgaaatgacg ggaactgcca ttaaaagata tatggcggat tactggactc tggcggctaa 3420 gacaggaagg atatggcaag gaccagagct atccgacgaa ttcttcacca aactaccaag 3480 cgggcttggt gacagagtgg caaaggcttt caaagaaaaa taccctggaa atacggtcgg 3540 agtacctgcc aggattactt tcacacaact atacctagag gagctttgca gagaagctgc 3600 ataccagaga tccctaaaga atttggactt ctgcagagaa ttccctattc ccggctacta 3660 caagaaacct ggaagaaagt ttggagtaag aaagtccaca tcatacaagg gaaaaccgca 3720 taagacccat atcaagatag acaaaagaaa atatctgcgg aacaagaagt gcaaatgtta 3780 tgcctgcgga gaagaaggtc attatgcaag tgaatgccga aacccaagaa aattaatgga 3840 gagggtttca gtactgcaag atttagaact tgggaaggat atggaaatag tctctgtaga 3900 ggaaaatgag actgaattat ctgacattta ttctatttct gaaggagagg aatctggacc 3960 acccaagtct gaaataatga gtctggaact attcatgctc cacgaaattg aagatgaacc 4020 tgaagcatat cttatcggag caacggacac ctggaggaat caaatgaaag tttccagaaa 4080 ggaatactac tgtcaacatg agtgggacca caccactaaa gttgtcgaaa gatgcagagc 4140 atgcacctac tatatcacca gccagccgag gataaagtgc acaaagtgta agatccctat 4200 ctgcaacctt tgcacaaatt actgctatgg gattaaaatg gctgatgaaa aagaaaaaga 4260 aaaggagaaa gaaaaagaat ctgacttact tggactagta aataattgcc gagaaattat 4320 ggccaagtac agaacagaaa aggaggtact cttagaggag ctcaacaatg cattaaaaca 4380 agctaaagag tacaaggaga aatttgagca tctggaaggc atctgtgagg agcaagaagc 4440 agaaaataaa gccttagctc aggaaaatca agatttgaag gaaaaggtgg aagaattaaa 4500 ggaagaaaat gaaatcctga aagatcagaa tactaccatg ggacaagaaa tggtaaagat 4560 tcaggaaaaa caacaggaag ctgaaaaatt ccttagaaga gaaatcaaaa ggagagagca 4620 agcaaacaca gaaaaattag ctcttatgat gaatgaggtt tgcacagaaa gagagtatga 4680 atatcagatc aacgcaacca cggttcaaaa caacctctat aacatcaaaa tcggcctgga 4740 agttgatgga gaaaagaaat ttctgaatgc catactggac actggggcag caacatgcgt 4800 agtatcacaa gctaaagtgt cagaaagatt cctggagcca tcagctatga aggtagaact 4860 aagaggagta aacggtacct ccaaagtcaa taaagtcctc aaagaaggta aaatttggat 4920 tggtaatcag tattttcggt tacctaggac ttatgcactg gaaatagaat tatctggagg 4980 tatagacatg ataatcggta cgaatttctt aagggctatg tctggtggag ttcgtataga 5040 aggagaaaca gttactttct ataagatagt gaccacgaca gatgcaccaa aggtccctca 5100 ccagataaat ttaattgagg agctggaaat gagcgaagag gaatttattg aggtccaaat 5160 atcaacaagt actgaaggat atatcaacaa ggagataatg gactcaaaac tgtttaagga 5220 attaaaggat caggggtata tcggggaaga gcctctgaag cactggcaga aaaacatggt 5280 taagtgcaaa ctcgagctga aaaacccaga tatcactatt caagacaaac cccttaagca 5340 tgtgacagca aaaatgaggg aaaccatgag ggctcatatt gataagctgc tgcaattgaa 5400 agtgatcaga ccctcatcca gtcgacacag gaccactgcc atgattgttg aaagcggaac 5460 agaagtggat ccaaagacag gacaagaaaa gagaggaaaa gagagattgg tcttcaactt 5520 caagagactg aatgacaata ctgagaaaga ccaatactcc ctcccaggaa taaacacgat 5580 tatcagtcga attggaaatg ccaaagttta ttcaaaattc gacttaaaaa gtggtttcca 5640 tcaagtagcc atggatcctg aatccatccc atggacggct ttcctggcta acaatgagct 5700 ctatgagtgg cttgtcatgc ccttcggtct gaagaatgct ccagcaatat tccaacgaaa 5760 gatggacacc tgttttaaag gtactgaagc cttcattgct gtttatatag atgatatttt 5820 agtattttct gagaccgaac aattgcatag agaccactta agaaaattcc tggaaatcag 5880 taaggccaat gggctcatat taagcccaac caagatgaaa ataggggtca aaactattga 5940 cttcctagga gcctctatag gaaactccaa gatcaagctt cagcctcata ttatcaagaa 6000 aatagctgac ttcgacgatc ataggctgaa agaaacaaaa ggtttgaggg catggcttgg 6060 gatattaaac tatgcaagaa actacatccc aaacttagga aaaactctag gccctcttta 6120 ctctaagata tcaccaaatg gggagaaaag aatgaacgct caggattggg cactagtcac 6180 tcaggttaaa agacaagtcc agaacctacc agagctggaa ttacccccag aaaaatgtaa 6240 aatggtgata gaaacggacg gctgcatgga aggttggggc ggcgtctgta agtggactac 6300 tgtcggcaag gcacaagaaa aagtatgcgc ctatgccagt ggaaagttta cccccatcaa 6360 aagcactatt gatgcggagg tacaggctgt aattaacagc cttgataagt tcaaaatata 6420 ctatttggac aagaaggagt tattgatcag aacagactgt gaagctatag tcaggttcta 6480 taaaagcaca gctcagaaca aaccctcccg ggttagatgg ctcatgctga ccgacttcat 6540 ctcgggtacg ggtctagaaa taaaatttga gcatattaat ggctgcgaga atatattggc 6600 agactccctc tctagactag tccaaacact gttacaagga tggcagcatc aacacctaaa 6660 tggaatccta ctggctctag aagaattgta tcaaaagccc aacccagaag ttgcgaagaa 6720 aatcgggcag atcattatga aagttctgga gaagccagct ggaatacaga taaatatgat 6780 cactgaagga cctaaacttc ggtgcgcatg tggaaaagat gctgagatag ctgtctccca 6840 cacttcgaga aatcctgacc gaccctttta caaatgccaa agaaatctgt gccacatttg 6900 gatatggaaa gacttagtgg atgactactt tcaaaactta acggcgtgga acagaatctc 6960 tgaagaacac agaagggaaa tggctcgtga agaaggtcag aatctggaag aagaagacta 7020 ctgggagaat gtattcaatg aggttttcga ccacgaagaa atcacggagt tctaccctga 7080 cggaggagat cccggttaga aacaaggaag cgtgaagagg acccattaca gctgtgatcg 7140 cacccacaag ctgtgtcaga aagaaaggta tggtgcaggg cggctagcgc tcaattatct 7200 tgcttttcag ttttcaattc tgtaaatggc agacagagtg aggtgtcaaa ggacgatggg 7260 gcccaatgag tacccgcttt gactacttta caatctgaaa gctatgcttt tattttgtta 7320 agctgatcct gagcctcggg gagccggatc tagcatagta aaaccagagg cgcccctggt 7380 attggcgctg cggttttaag cccacggttt tcggactcca tgagttttga aatccgacgg 7440 ctttagtctg agaaggctca gcctttctct atataagggt ttgtaacccc tcgttgcaag 7500 catagtcgga aataccagac tgcttacttc gagttttgaa atcccaataa gaatcctcag 7560 ttttcttcat ccttctttcg gttcacttcc tgaaattggg caagccccat agtaaggaaa 7620 gatccatttg gtgtaattcc gcttcactcc 7650 //