ID AY795989; SV 1; linear; genomic DNA; STD; VRL; 2726 BP. XX AC AY795989; XX DT 24-MAR-2005 (Rel. 83, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 3) XX DE East African cassava mosaic virus segment B, complete sequence. XX KW . XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2726 RX DOI; .1186/1743-422X-2-21. RX PUBMED; 15784145. RA Ndunguru J., Legg J.P., Aveling T.A., Thompson G., Fauquet C.M.; RT "Molecular biodiversity of cassava begomoviruses in Tanzania: evolution of RT cassava geminiviruses in Africa and evidence for East Africa being a center RT of diversity of cassava geminiviruses"; RL Virol J 2:21-21(2005). XX RN [2] RP 1-2726 RA Ndunguru J., Fauquet C.M.; RT ; RL Submitted (27-OCT-2004) to the INSDC. RL ILTAB, Donald Danforth Plant Science Center, 975 North Warson Road, St. RL Louis, MO 63132, USA XX DR MD5; 02f367e70f38bb57ac7ef7eb300563b2. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC3560262; 23186303. XX FH Key Location/Qualifiers FH FT source 1..2726 FT /organism="East African cassava mosaic virus" FT /segment="B" FT /isolate="TZ1" FT /mol_type="genomic DNA" FT /country="Tanzania" FT /db_xref="taxon:62079" FT gene 309..1073 FT /gene="BV1" FT CDS 309..1073 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:Q58WG3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q58WG3" FT /protein_id="AAX39376.1" FT /translation="MYTTPRRGYRSSYKPRAIRRTFAKTPYNQVTRPSVNRRITFDSAK FT QVYSRRSIEDVHSSTNLQLSNQGDHTSYVNFPSLGVDGNGGRCFDHIKLLNLRVSGTVS FT VTQTGGDDPMGEQSLLRGIFVMAVVMDKKPFVPEGVSTLPTFKELFGEYDTVYGIPRLK FT ENIRHRYRLIGTVKRYVTTDEAHVQKPVNLRRRLYNTRYPVWSSFKDLESSSTGGNYKN FT VNKNAILVSYVWVSMSRSKCEVYSQLVLNYVG" FT gene complement(1243..2133) FT /gene="BC1" FT CDS complement(1243..2133) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:Q58WG2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q58WG2" FT /protein_id="AAX39377.1" FT /translation="MDNTFTVTDNNYIHSKRTEYALTNDAAPIHLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNANGSVIVEIRDNRVSLEDAAQAAFTFPIACNVGLHYFSS FT TYFSISEPSPWSIMYRVEDSNVVNAVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPTAHSQRPIANRLITILPGETWATKSQIGLTCSSD FT KRDIGFMRSQSMRLDPSTRPLEEDNDSSEYPYQGLHRLSTPVLDPGDSVSGTFRHSLTK FT GPRIHHRNHYSQMPH" XX SQ Sequence 2726 BP; 767 A; 428 C; 710 G; 821 T; 0 other; accggatggc cgctttggtg gacgcgtgta tgtgggcgca tgtgtgggtc ctacggaaaa 60 cgttagtgcg atccagttgt tgtaaaagtg gatcgtgtgg tcctgttgat atatttattg 120 taattatagg gcgtgatatc tatgctgaca cgtggtatga tagattttaa tatcattgta 180 ccgggatggg ttggttaaga gatgaaaatg tgtttgatga ccggtctatt tgtgagccac 240 gccgctatcg atgaagatgt cactgatgta tataaatatc tgagcatgat aggtgtgtgt 300 attgcatcat gtatactact ccgagacgcg ggtatagatc atcgtataag cctcgtgcta 360 tacggcgaac gtttgcgaaa actccatata accaggtgac tagaccttct gtgaacagga 420 ggataacatt tgattctgcg aaacaggtgt attctcgtag gtcgatagag gacgttcata 480 gtagtacgaa tttgcagctg tcgaaccagg gagatcatac gtcgtatgtg aattttccat 540 ctctcggagt tgatggtaat gggggtaggt gttttgacca catcaaactg ttgaacttac 600 gcgtctctgg gaccgttagc gtcactcaaa ctggaggaga tgatcctatg ggagagcaat 660 cgctattgag aggtatattt gtaatggctg ttgtaatgga caaaaaacct tttgttcctg 720 aaggtgttag tacgttgcct acgttcaagg aattatttgg agagtatgat accgtctacg 780 ggattcctag gttaaaggaa aatatacgac atcgttatcg tcttattggt acggttaaac 840 ggtatgtaac tacagatgaa gcgcatgtac aaaagccggt gaatttaaga cggaggttat 900 acaacactcg gtatccggtg tggtcgtcat tcaaggatct ggagtcgagt agtactgggg 960 gtaattataa gaatgttaac aagaatgcta ttcttgttag ttatgtatgg gtgtcgatgt 1020 cacgtagcaa gtgtgaggtg tattcacaat tggtattaaa ttatgtggga tgataataaa 1080 atggattaag tttaagcaac aataaccatg tgactcaaga gataacattg tggacataag 1140 gataaatgtt gttcgtcaac gaaaattatt aataagctga aacaaatcca ttaaatacaa 1200 aatacatatt tctacaacgg tctcggtgtc tcgctattag tcttaatgag gcatctgtga 1260 atagtggttt cgatgatgga ttcgaggtcc cttcgtgaga ctgtgtctga acgtgcctga 1320 cacagaatca cccgggtcta ggactggtgt gcttaatcta tgtaggcctt ggtatgggta 1380 ttcggaggag tcgttatctt cttccagtgg tcgtgtagat ggatcgagtc gcatagactg 1440 tgatctcata aatcctatgt cccgtttgtc cgaagagcat gttaggccga tctgggattt 1500 ggtagcccat gtctcgccag gtagtatggt gatgagcctg ttggctatgg gtctttgact 1560 atgggctgtt ggagttggat ttagtaatcg ccgtctcgtt tctccttttt ccacggacca 1620 gaagtctatg cagtcttttg tgtatccctt ggataatatg ttgattgttg ggggtttgaa 1680 acgtatgtcc gtggaatgtt tggccgatga taaacggagc tttgccttga tggatgcgaa 1740 tttcaccgca tttacgacgt tagagtcttc gactctgtac atgatgctcc aaggagaggg 1800 ttctgaaatc gaaaaatatg tagaagagaa gtagtggagg cctacgttgc aagcgattgg 1860 gaaagtgaaa gccgcttgag ctgcgtcttc aaggctgacg cgattgtctc ttatttcgac 1920 gatgaccgac ccatttgcgt taaatgggac ttggttgcgg tattcaatta taatgtgatc 1980 gattttcata catcgacctt tgagtcgcat ggtagcctgc tcgaatgagc ttggaaattg 2040 gagatggatt ggtgcagcat cgtttgttaa tgcgtactct gttcgtttgc tgtgtatgta 2100 attattgtcg gtgacggtga atgtgttgtc catactatga atgaaaaaaa ttatggttag 2160 aaaacggaga gaatatatgt ataaaagtca gaataaagtt tataaaaatg ttttgtagac 2220 gtggaagcat atatgcatgt gatatatata agaacacaat aagtcagaac aaggatcata 2280 tatttgtaat tggccgcgca gcggattgga attcagatag atctaacaaa gaagaaatgc 2340 gaattgggtt atgtgatgta aaccactcac cgaatccact tgtgaagcag tcgtgacgga 2400 attccagttc caattggaga aaaccaataa ataaatgtta acgatataaa agcagaattg 2460 tttgggagaa aaaggaaagt aataagatgt tatgctctgt gtctttaaat tatatgctat 2520 tgggtgttta tataggcgtt aataagggac acgtgtagag agagaaagaa gagagaggcg 2580 agagctttcg ggggacaccc taaactctat ggaaacggtg gaatggggga caatatatat 2640 gatgtccccc aatggcattt gtgtaattag gtaaacttcc attcaaaatt tgaactgcga 2700 atagtgacgg ccatccgatt aatatt 2726 //