Dbfetch
ID AY795900; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC AY795900; XX DT 15-NOV-2004 (Rel. 81, Created) DT 26-FEB-2005 (Rel. 83, Last updated, Version 3) XX DE Lindernia anagallis yellow vein virus segment DNA A, complete sequence. XX KW . XX OS Lindernia anagallis yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Che H., Luo D.; RT ; RL Submitted (27-OCT-2004) to the INSDC. RL Enviromental and Plant Protection Institute, Chinese Academy of Tropical RL Agricultural Sciences, Bao Dao Xin Cun, Danzhou, Hainan 571737, China XX DR MD5; ee167ed7e65a899ca73124e2d10f1679. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Lindernia anagallis yellow vein virus" FT /segment="DNA A" FT /host="Lindernia anagallis (Burm.f.) Pennell" FT /mol_type="genomic DNA" FT /country="China" FT /db_xref="taxon:300411" FT gene 119..469 FT /gene="AV2" FT CDS 119..469 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q5RZ92" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5RZ92" FT /protein_id="AAV54505.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQAIENTYSPDTKGAEFIRRL FT IVILRCRNYDEATCRYRHLYAEVESTPSSEFRQPICEPCSCPFCPRHKQKELLGKQANV FT QEAQNVQDVQKP" FT gene 279..1052 FT /gene="AV1" FT CDS 279..1052 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5RZ91" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5RZ91" FT /protein_id="AAV54506.1" FT /translation="MTKRPADIVISTPRSKVRRRLNFDSPYASRVVAPSVLVTSKKSSW FT ASRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSFEKRHDVSHTGTGLCVSDVTRGTGLTH FT RTGKRFCIKSVYILGKIWMDENIKTKNHTNTVLFWLVRDRRPVTTPYGFAKAFNMYDNE FT PSTATIKNDLRDRLQVLHKFGVTVTGGQYASKEQAMVKKFWKINNHVTYNHQEKAAYEN FT HTENALILYMACTHASNPVYATLKIRIYFYDSVNN" FT gene complement(1049..1459) FT /gene="AC3" FT CDS complement(1049..1459) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q5RZ90" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5RZ90" FT /protein_id="AAV54507.1" FT /translation="MTTDSRTGEPITAAQARNGAFIWTVPNPLYFKIIDYEENPFLRPY FT NTVHFQIRFNHNLRKALEIHQCFLNFRVLTPLRAPTWRFLRIFSRHVLGYLNNLGVISL FT NDVINAVDYVLYDVFNNTLSVSESHIIKFNLY" FT gene complement(1194..1601) FT /gene="AC2" FT CDS complement(1194..1601) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q5RZ89" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5RZ89" FT /protein_id="AAV54508.1" FT /translation="MQPSSPSRSHCTQVPIKVQHRAAKKKVIRRRRIDLTCGCTYYLSI FT NCHDHGFTHRGTHHCSSSKEWRVYLDGSKSPIFQDNRLRGEPISPAIQHSPLPDTVQPQ FT PEESIGDTPMLPQLSGFDSLTSSDLAFLANI" FT gene complement(1501..2670) FT /gene="AC1" FT CDS complement(1501..2670) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:Q5RZ88" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5RZ88" FT /protein_id="AAV54509.1" FT /translation="MPFGDTYILSPVSNSFRKFACLQLTKSMAPPKRFKIQARNYFLTY FT PHCSLTKEEALSQLKNIETPTNKKFIKICRELHEDGSPHLHVLVQFEGKFVCTNNRFFD FT LVSPTRSAHFHPNIQGAKSSSDVKSYMEKDGDTIDWGEFQIDGRSARGGCQNANDACAE FT VLNAGSKEAALSIIREKLPKDYIFQFHNLNSNLDRIFTPPLEVYISPFSSSSFDQVPEE FT LECWVSENVMGAAARPWRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNE FT AWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKE FT YLDEERNSALKAWALKNATFVTLEEPLYSGTNQSATPCSEEESNSQTED" FT gene complement(2175..2432) FT /gene="AC4" FT CDS complement(2175..2432) FT /codon_start=1 FT /gene="AC4" FT /product="transcriptional regulator protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5RZ87" FT /protein_id="AAV54510.1" FT /translation="MGALISMCSCSSKENSSARITDSSIWYPQPGQHISIRTYRELNPA FT PTSSPIWRRMETPSTGENSRSTEEVLEEVARTLTTHVQRC" XX SQ Sequence 2739 BP; 738 A; 549 C; 631 G; 821 T; 0 other; accggatggc cgccgatttt tttaaagtgg gccctcgacg aatgataatg cgcgctcatc 60 gcttatttag cttgtggccc cgctatataa gacttacgaa gtaagtttcg ggttaaaaat 120 gtgggaccct ttagtgaacg agtttcctga aactgttcac ggttttaggt gtatgcttgc 180 cgtaaaatac ttgcaggcca tagaaaatac gtattctccg gatacgaagg gtgccgaatt 240 tatacgtagg ttgatcgtaa ttctcaggtg ccgtaattat gacgaagcga cctgccgata 300 tcgtcatctc tacgccgagg tcgaaagtac gccgtcgtct gaatttcgac agcccatatg 360 cgagccgtgt agttgcccct tctgtcctcg tcacaagcaa aaagagctct tgggcaagca 420 ggccaatgta caggaagccc agaatgtaca ggatgtacag aagccctgat gtgcccaggg 480 ggtgtgaagg cccatgtaaa gtccaatcat ttgagaaacg acatgatgtt agccatactg 540 gtactgggct ttgtgtttct gatgttacta gaggtactgg gcttactcat cgtactggta 600 agagattttg cattaagtcc gtttacatac tgggtaagat atggatggat gaaaatatca 660 agaccaagaa ccatacgaac accgtattgt tctggcttgt tagagatagg aggcccgtta 720 ctacgccata tgggtttgct aaagcattta acatgtatga taatgagcca tctactgcga 780 ctatcaagaa tgaccttcga gacagattac aagttttgca taagtttgga gttacggtta 840 ctggtggaca gtatgcgtct aaggaacaag ctatggtgaa gaaattctgg aagatcaata 900 atcatgtcac gtacaatcat caagagaagg ctgcttatga gaatcacact gagaatgctt 960 taattttgta tatggcatgt actcatgcct ctaatcccgt gtatgctact ctcaaaatca 1020 gaatctattt ttatgattct gttaataatt aataaagatt gaattttatt atatgactct 1080 cggaaactga gagagtgttg ttgaatacat cgtacaatac ataatctact gcattaatta 1140 catcattaag agaaatgaca cctaaattat ttaaataacc taatacatgt ctactaaata 1200 ttcgcaagaa acgccaagtc ggagctcgta agggagtcaa aacccgaaag ttgaggaagc 1260 attggtgtat ctccaatgct ttcctcaggt tgtggttgaa ccgtatctgg aagtggactg 1320 tgttgtatgg ccggagaaat gggttctcct cgtagtctat tatcttgaaa tataggggat 1380 ttggaaccgt ccaaataaac gcgccattcc ttgcttgagc tgcagtgatg ggttcccctg 1440 tgcgtgaatc cgtggtcatg gcagttgatt gagaggtagt aggtgcaccc gcacgtcagg 1500 tcaatcctcc gtctgcgaat tactttcttc ttcgctgcac ggtgttgcac tttgattggt 1560 acctgagtac agtggctcct cgagggtgac gaaggttgca ttctttagag cccaggcttt 1620 taatgcgctg ttccgctctt cgtctaggta ctctttatat gatgatgttg ggcctggatt 1680 gcagaggaag attgttggga tgcctccttt aatttgaatt ggcttcccgt actttgtgtt 1740 gctttgccag tccctttggg cccccatgaa ttctttaaag tgctttagat agtgggggtc 1800 tacatcatca atgacgttgt accatgcctc gttactgtac accttggggc tcaagtcaag 1860 gtgaccacac aaataattat gtggacccaa agacctagcc cacatggtct tgccggtcct 1920 actatcaccc tcaattacaa tactattggg tctccaaggc cgcgcagcgg cacccatgac 1980 attttcggac acccagcact caagttcttc gggaacttga tcaaaagaag aagaagaaaa 2040 aggagaaata taaacctcca atggaggtgt aaaaatccta tctaaattac tatttaaatt 2100 atgaaattga aaaatataat cttttgggag tttctccctt attattgata aggccgcctc 2160 tttagaacct gcatttaaca cctctgcaca tgcgtcgtta gcgttctggc aacctcctct 2220 agcacttctt ccgtcgatct ggaattctcc ccagtcgatg gtgtctccat ccttctccat 2280 ataggacttg acgtcggagc tggatttagc tccctgtatg ttcggatgga aatgtgctga 2340 cctggttggg gataccagat cgaagaatct gttattcgtg cagacgaatt ttccttcgaa 2400 ctgcacgagc acatggagat gagggctccc atcttcgtgt agttctctgc agatcttgat 2460 gaatttttta tttgtgggtg tttcgatatt ttttaattgg gaaagtgctt cttctttggt 2520 taaagaacaa tgggggtatg taaggaaata atttctggct tgtattttaa aacgttttgg 2580 aggagccatt gacttggtca attggagaca agcaaacttg cggaatgaat tggagacagg 2640 agacaatata taggtgtctc caaatggcat attcgtaatt tagaatttca atttgaattt 2700 caaatttaaa attggtaaag ggccatccgc tctaatatt 2739 //