Dbfetch
ID AY765257; SV 1; circular; genomic DNA; STD; VRL; 2725 BP. XX AC AY765257; XX DT 01-OCT-2005 (Rel. 85, Created) DT 28-OCT-2005 (Rel. 85, Last updated, Version 2) XX DE Cotton leaf curl Multan virus - [Ludhiana:04] segment DNA-A, complete DE sequence. XX KW . XX OS Cotton leaf curl Multan virus - [Ludhiana:04] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2725 RA Radhakrishnan G., Padmalatha K.V., Varma A., Malathi V.G.; RT "Complete nucleotide sequence of Cotton Leaf Curl Virus isolated from RT Ludhiana, Punjob, India (Ludhiana CLCuV-A)"; RL Unpublished. XX RN [2] RP 1-2725 RA Radhakrishnan G., Padmalatha K.V., Varma A., Malathi V.G.; RT ; RL Submitted (25-SEP-2004) to the INSDC. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute, RL Pusa Road, New Delhi, Delhi, India XX DR MD5; 0422bd771debaeb4090a46715fd547b3. XX FH Key Location/Qualifiers FH FT source 1..2725 FT /organism="Cotton leaf curl Multan virus - [Ludhiana:04]" FT /segment="DNA-A" FT /mol_type="genomic DNA" FT /country="India:Ludhiana, Punjob" FT /note="Ludhiana CLCuV-A" FT /db_xref="taxon:352886" FT gene 117..482 FT /gene="AV2" FT CDS 117..482 FT /codon_start=1 FT /gene="AV2" FT /product="movement/precoat protein" FT /db_xref="GOA:Q3L1A4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q3L1A4" FT /protein_id="AAX84762.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT EAQNVSDVQKSGCSKGM" FT gene 277..1047 FT /gene="AV1" FT CDS 277..1047 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q3L1A3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q3L1A3" FT /protein_id="AAX84763.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1050..1454) FT /gene="AC3" FT CDS complement(1050..1454) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q3L1A2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q3L1A2" FT /protein_id="AAX84766.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LSIRIQFNYNTRKALGLHKCFLTFRIWTTLHPQTGLFLRVFKTKVLKYLNNLGVISINL FT VIKAVEHVLYNLIQQTMYVDQYSDIKFKLY" FT gene complement(1147..1599) FT /gene="AC2" FT CDS complement(1147..1599) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:Q3L1A1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q3L1A1" FT /protein_id="AAX84765.1" FT /translation="MRSSSLSKDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGYTLDPDPVQLQH FT SESSGTAQVFSNLPNLDDLTPSDWSFLKGIQNQSPQISEQSRCNFN" FT gene complement(1496..2581) FT /gene="AC1" FT CDS complement(1496..2581) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:Q3L1A0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q3L1A0" FT /protein_id="AAX84764.1" FT /translation="MPRDLKTNAKNYFLTYPKCSLTKEETLSQLLNLHTPVNKKYIKIC FT RELHQNGEPHLHVLIQFEGKYQCTNKRFFDLVSPTRTAHFHPNIQGAKSSSDVKAYIDK FT DGDTLGWGEFQIDGRSARGGRQTANDAYAAALNAGNKSEALRVIKELAPKDFVLQFHNL FT NANLDRIFQEPPAPYISPFSSSSFDQVPEELEVWAIDNVVDPAARPLRPRSIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQS FT NTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEERNTALTNWAVKNAIFITLEGPLYS FT GTNQSTAQGSEETQQEEESRS" FT gene complement(2128..2430) FT /gene="AC4" FT CDS complement(2128..2430) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q3L199" FT /protein_id="AAX84767.1" FT /translation="MGNLIFTCSSSSRGSTNARIKDSSTWYPQPGQHISIRTFRELNQA FT QMSRPTSTRTGTLSGGESFRSMEDQQEEDDRQPTTLTPQHLTQAISQRLLESLRN" XX SQ Sequence 2725 BP; 685 A; 551 C; 656 G; 833 T; 0 other; accggatggc cgcgcgattt tttttgtggg cccccgattt atgagattgc tccctcaaag 60 ctaaataacg ctcccgcaca ctataagtac ttgcgcacta agtttcaaat tcaaacatgt 120 gggatccact attaaacgaa ttccctgata cggttcacgg gtttcggtgt atgctttctg 180 tgaaatattt gcaacttttg tcgcaggatt attcaccgga tacgcttggg tacgagttaa 240 tacgggattt aatttgtatt ttacgctccc gtaattatgt cgaagcgagc tgccgatatc 300 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag cccatacacc 360 agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac aggcatggac aaacaggcct 420 atgaacagga agcccagaat gtatcggatg tacagaagtc cggatgttcc aaggggatgt 480 gagggtccct gtaaggtaca gtcgtttgaa tctcgacacg atgttgtcca tattggtaag 540 gtaatgtgta tttctgatgt tacgcgtgga gtcggtttga cccatcgtat aggtaagcgt 600 ttttgtgtca agtcagttta tgttttaggt aagatatgga tggacgagaa catcaagacc 660 aagaaccata cgaattcggt gatgtttttc cttgttcgtg atcgacgacc gacagataaa 720 ccacaagatt ttggtgaagt atttaatatg tttgataacg agcccagtac ggccaccgtt 780 aagaacatgc atagggatcg gtaccaggtg ttgaggaaat ggcatgcaac cgttactggt 840 ggtcaatatg catcgaagga acaggcgttg gttaagaagt ttatcagggt taacaattat 900 gttgtttaca accagcagga ggcaggaaaa tacgagaatc acaccgagaa tgcattgatg 960 ctttatatgg cttgtaccca tgctagtaac ccagtttatg ctacgcttaa gattcggata 1020 tatttttatg actctgtaac gaattgatat taataaagtt tgaattttat atctgaatat 1080 tgatctacat acatagtttg ttggattaaa ttgtacaata catgttctac agctttaata 1140 actaaattaa ttgaaattac accgagattg ttcagatatt tgaggacttt ggttttgaat 1200 acccttaaga aaagaccagt ctgagggtgt aaggtcgtcc agattcggaa ggttagaaaa 1260 cacttgtgca gtcccagagc tttccgagtg ttgtagttga actggatccg gatcgagagt 1320 atatccatat tcgtcgtgaa tggacggttg acgtggctga tgatcttgaa atagagggga 1380 tttggaacct cccagatata tgcgccattc cctgcttgag ctgcagtgat gggttcccct 1440 gtgcgtgaat ccatggttgt ggcagttgat tgacagataa taagaacacc cgcattcaag 1500 atctactctc ctcctcctgt tgcgtctctt cgcttccctg tgctgtactt tgattggtac 1560 ctgagtacag gggtccttcg agagtgatga agatcgcatt ctttactgcc cagtttgtta 1620 gtgcggtgtt cctttcctcg tctaggaatt ctttataact gctgttggga ccaggattgc 1680 agaggaagat tgttggtatc ccgcctttaa tttgaactgg cttcccgtac tttgtgttgg 1740 attgccagtc cctttgggcc cccatgaact ctttaaagtg tttgaggaaa tgcgggtcga 1800 cgtcatcaat gacgttatac caggcgtcgt tactgtagac cttgggactc agatccagat 1860 gtccgcacaa atagttatgt ggtcccagtg atctagccca catcgtcttt cccgttcgac 1920 tatctccttc aattactata ctccgaggtc taaggggccg cgcagcggga tcgacaacgt 1980 tatcgatggc ccaaacttca agttcttctg gaacttgatc gaaagaagaa gaagaaaaag 2040 gagaaatata gggagctggt ggctcctgaa agattctgtc tagatttgca tttaaattat 2100 gaaattgtag tacaaaatct ttaggagcta gttccttaat gactctaaga gcctctgact 2160 tattgcctgc gttaagtgct gcggcgtaag cgtcgttggc tgtctgtcgt cctcctcttg 2220 ctgatcttcc atcgatctga aactctcccc acccgagagt gtccccgtcc ttgtcgatgt 2280 aggccttgac atctgagctt gatttagctc cctgaatgtt cggatggaaa tgtgctgtcc 2340 tggttgggga taccaggtcg aagaatcttt tattcgtgca ttggtacttc ccctcgaact 2400 ggatgagcac gtgaagatga ggttccccat tttggtgaag ctctctgcag atcttgatgt 2460 attttttgtt tactggtgta tgtaggttta gtaattggga gagggtttct tctttagtta 2520 gagagcattt gggataagtg aggaagtagt ttttggcgtt tgtttttaaa tcacgtggca 2580 ttttggcaat cggtgtacac tctaattcta tggcaatcgg tgtaacgggg tgcgatatat 2640 aggtgtaccc caaatggcat tatcgtaatt tgagaaatca tttcaaaatc ctcacgcttc 2700 aaaaagcggc catccgttta atatt 2725 //