Dbfetch
ID AY765256; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC AY765256; XX DT 01-OCT-2005 (Rel. 85, Created) DT 28-OCT-2005 (Rel. 85, Last updated, Version 2) XX DE Cotton leaf curl Multan virus - [Delhi:04] segment DNA-A, complete DE sequence. XX KW . XX OS Cotton leaf curl Multan virus - [Delhi:04] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RA Radhakrishnan G., Padmalatha K.V., Varma A., Malathi V.G.; RT "Complete nucleotide sequence of Cotton Leaf Curl Virus isolated from RT Delhi, India (Delhi-DNA-A)"; RL Unpublished. XX RN [2] RP 1-2738 RA Radhakrishnan G., Padmalatha K.V., Varma A., Malathi V.G.; RT ; RL Submitted (25-SEP-2004) to the INSDC. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute, RL Pusa Road, New Delhi, Delhi, India XX DR MD5; ebd3af38d9bf61d87027cfeff38f34e2. DR EuropePMC; PMC6451280; 30954067. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Cotton leaf curl Multan virus - [Delhi:04]" FT /segment="DNA-A" FT /mol_type="genomic DNA" FT /country="India:Delhi" FT /db_xref="taxon:352885" FT gene 130..486 FT /gene="AV2" FT CDS 130..486 FT /codon_start=1 FT /gene="AV2" FT /product="movement/precoat protein" FT /db_xref="GOA:Q3L1B0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q3L1B0" FT /protein_id="AAX84756.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT EAQDVQDVQKSRCS" FT gene 290..1060 FT /gene="AV1" FT CDS 290..1060 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q3L1A9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q3L1A9" FT /protein_id="AAX84757.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHLGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1147..1467) FT /gene="AC3" FT CDS complement(1147..1467) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q3L1A8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q3L1A8" FT /protein_id="AAX84761.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNYNTRKALGLRKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL FT VI" FT gene complement(1160..1612) FT /gene="AC2" FT CDS complement(1160..1612) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:Q3L1A7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q3L1A7" FT /protein_id="AAX84759.1" FT /translation="MRSSSLSKDPCTQVPIKVQHRKAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQLQH FT SESSGTAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISEQSRCNFN" FT gene complement(1509..2594) FT /gene="AC1" FT CDS complement(1509..2594) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:Q3L1A6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q3L1A6" FT /protein_id="AAX84758.1" FT /translation="MPRDLKTNAKNYFLTYPKCSLTKEETLSQLLNLHTPVNKKYIKIC FT RELHQNGEPHLHVLIQFEGKYQCTNKRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYIDK FT DGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGNKSEALRVIKELAPKDFILQFHNL FT NANLDRIFQEPPAPYISPFSSSSFDQVPEELEVWAIDNVVDPAARPLRPRSIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWRS FT NTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLEGPLYS FT GTNQSTAQESEETQQEEESRS" FT gene complement(2141..2443) FT /gene="AC4" FT CDS complement(2141..2443) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q3L1A5" FT /protein_id="AAX84760.1" FT /translation="MGNLIFTCSSSSKGSTNARIKDSSTWYPQPGQHISIRTFRELNQA FT QMSRPTSTRTGTLSSGESFRSMEDQQEEDNRQPTTLTPQHLTQAISQRLLESLRN" XX SQ Sequence 2738 BP; 698 A; 537 C; 654 G; 849 T; 0 other; accggatggc tgcgcgattt tttgtgggcc ttaccattaa cacttgtcgg ccaatcatat 60 gactccctca aagctaaata acgctcccgc acactataag tacttgcgca ctaagtttca 120 aattcaaaca tgtgggatcc actattaaac gaattccctg atacggttca cgggtttcgg 180 tgtatgcttt ctgtgaaata tttgcaactt ttgtcgcagg attattcacc ggatacgctt 240 gggtacgagt taatacggga tttaatttgt attttgcgct cccgtaatta tgtcgaagcg 300 agctgccgat atcgtcattt ctacgcccgc gtcgaaagta cgccggcgtc tgaacttcgg 360 cagcccatac accagccgtg ctgctgcccc cattgtccgc gtcacaaaac aacaggcatg 420 gacaaacagg cctatgaaca ggaagcccag gatgtacagg atgtacagaa gtccagatgt 480 tcctagagga tgtgaaggtc catgtaaggt tcagtcgttt gagtccagac atgatattca 540 gcatttaggt aaagtaatgt gtgttagtga tgttactcgt ggtactgggc tgacccatag 600 agttggtaag agattttgtg tcaagtctgt ttatgtgttg ggtaagatat ggatggatga 660 gaacattaag acgaagaatc acacgaatag tgtgatgttt ttcttggtta gagatcgtag 720 acctgttgat aaacctcaag attttggaga ggtatttaat atgtttgata atgagcccag 780 tacggcgact gtgaagaatg ttcatcgtga taggtatcaa gttctgcgta aatggtatgc 840 aactgtcacc ggtggacaat acgcttcaaa ggaacaggct ttggtcaaga agtttgtcag 900 agttaacaat tatgttgttt acaatcaaca ggaagcagga aaatacgaga atcatacgga 960 aaatgcgtta atgctttata tggcttgtac tcacgctagc aaccctgttt atgctacgtt 1020 gaagattagg atatattttt atgactctgt aacgaattga tattaataaa gtttgaattt 1080 tatttctgaa tattgatcta catacatagt ttgttggatt acattgtaca atacatgttc 1140 tacagcttaa ataactaaat taattgaaat tacaccgaga ttgttcagat atttgaggac 1200 ttgggttttg aataccctta agaaaagacc agtctgaggg tgtaaggtcg tccagattcg 1260 gaaggttaga aaacacttgc gcagtcccag agctttccga gtgttgtagt tgaactggat 1320 cctgatcgtg agtatatcca tattcgtcgt gaatggacgg ttgacgtggc tgatgatctt 1380 gaaatagagg ggatttggaa cctcccagat atatgcgcca ttccctgctt gagctgcagt 1440 gatgggttcc cctgtgcgtg aatccatggt tgtggcagtt gattgacaga taataagaac 1500 acccgcattc aagatctact ctcctcctcc tgttgcgtct cttcgctttc ctgtgctgta 1560 ctttgattgg tacctgagta caggggtcct tcgagagtga tgaagatcgc attctttact 1620 gcccagtttt ttagtgcggt gttcttttcc tcgtctagga attctttata actgctgttg 1680 ggaccaggat tgcagaggaa gattgttggt atcccgcctt taatttgaac tggcttcccg 1740 tactttgtgt tggatcgcca gtccctttgg gcccccatga actctttaaa gtgtttgagg 1800 aaatgcgggt cgacgtcatc aatgacgtta taccaggcgt cgttactgta gaccttggga 1860 ctcagatcca gatgtccgca caaatagtta tgtggtccca gtgatctagc ccacatcgtc 1920 tttcccgttc gactatctcc ttcaattact atactccgag gtctaagggg ccgcgcagcg 1980 ggatcgacaa cgttatcgat ggcccaaact tcaagttctt ctggaacttg atcgaaagaa 2040 gaagaagaaa aaggagaaat atagggagcc ggtggctcct gaaagattct gtctagattt 2100 gcatttaaat tatgaaattg tagtataaaa tctttaggag ctagttcctt aatgactcta 2160 agagcctctg acttattgcc tgcgttaagt gctgcggcgt aagcgtcgtt ggctgtctgt 2220 tgtcctcctc ttgctgatct tccatcgatc tgaaactctc cccactcgag agtgtccccg 2280 tccttgtcga tgtaggcctt gacatctgag cttgatttag ctccctgaat gttcggatgg 2340 aaatgtgctg acctggttgg ggataccagg tcgaagaatc ttttattcgt gcattggtac 2400 ttcccttcga actggatgag cacgtgaaga tgaggttccc cattttggtg aagctctctg 2460 cagatcttga tgtatttttt gtttactggt gtatgtaggt ttagtaattg ggagagggtt 2520 tcttctttag ttagagagca tttgggataa gtgaggaagt agtttttggc gtttgttttt 2580 aaatcacgtg gcattttggc aatcggtgta cactctaatt ctatggcaat cggtgtaacg 2640 gggtgcaata tataggtgta ccccaaatgg cattatcgta atttgagaaa tcatttcaaa 2700 atcctcacgc tccaaaaagc ggccatccgt ttaatatt 2738 //