ID AY745495; SV 1; linear; genomic RNA; STD; VRL; 2816 BP. XX AC AY745495; XX DT 12-OCT-2004 (Rel. 81, Created) DT 18-JUN-2005 (Rel. 84, Last updated, Version 2) XX DE Potato virus Y isolate N:O-Mb55 polyprotein gene, partial cds. XX KW . XX OS Potato virus Y OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2816 RX AGRICOLA; IND43697250. RA Nie X., Singh R.P., Singh M.; RT "Molecular and pathological characterization of N:O isolates of the Potato RT virus Y from Manitoba, Canada"; RL Can. J. Plant Pathol. 26(4):573-583(2004). XX RN [2] RP 1-2816 RA Nie X., Singh R.P., Singh M.; RT ; RL Submitted (09-SEP-2004) to the INSDC. RL Potato Research Centre, Agriculture and Agri-Food Canada, 850 Lincoln Road, RL P.O. Box 20280, Fredericton, NB E3B 4Z7, Canada XX DR MD5; f1bac6f02535057024519365ecd91a67. XX FH Key Location/Qualifiers FH FT source 1..2816 FT /organism="Potato virus Y" FT /isolate="N:O-Mb55" FT /mol_type="genomic RNA" FT /country="Canada" FT /db_xref="taxon:12216" FT 5'UTR 1..188 FT CDS 189..>2816 FT /codon_start=1 FT /product="polyprotein" FT /note="contains P1, HC/Pro, and P3" FT /db_xref="GOA:Q5XNR2" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q5XNR2" FT /protein_id="AAU95469.1" FT /translation="MATYTSTIQFGSIECKLPYSPAPFGLVAGKREVSTTTDPFASLEM FT QLSARLRRQEFATIRTSKNGTCMYRYKTDVQIARIQKKREEREREEYNFQMAASSVVSK FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG FT SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVCLQHLARTDKWT FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM FT VQFSSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTC FT AQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFN FT EVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKG FT DISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSA FT YENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCC FT TTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAML FT INISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHE FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTI FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPYLLILSILSPGILMAMYNNGIF FT ELAVRLWINEKQSIAMIASLLSALALRVSAAETLVAQRIIIDTAATDLLDATCDGFNLH FT LTYPT" XX SQ Sequence 2816 BP; 887 A; 553 C; 632 G; 744 T; 0 other; aattaaaaca actcaataca acataagaaa atcaacgcaa aaacactcac aaaagctttc 60 aactctattt caaacaattt gttaagtttc aatttcgatc ttcatcaaac aaactctttc 120 aatttcagtg taagctatcg taattcagta agttatttca aactctcgta aattgcagaa 180 gatcatccat ggcaacttac acatcaacaa tccagtttgg ttccattgaa tgcaaacttc 240 catactcacc cgctcctttt gggctagttg cggggaaacg agaagtttca accaccactg 300 accccttcgc aagtttggag atgcagctta gtgcgcgatt acgaaggcaa gagtttgcaa 360 ctattcgaac atccaagaat ggtacttgca tgtatcgata caagactgat gtccagattg 420 cgcgcattca aaagaagcgc gaggaaagag aaagagagga atataatttc caaatggctg 480 cgtcaagtgt tgtgtcgaag atcactattg ctggtggaga gccaccttca aaacttgaat 540 cacaagtgcg gaggggtgtc atccacacaa ctccaaggat gcgcacagca aaaacatatc 600 acacgccaaa gttgacagag ggacaaatga accaccttat caagcaggtg aagcaaatta 660 tgtcaaccaa aggagggtct gttcaactga ttagcaagaa aagtacccat gttcactata 720 aagaagtttt gggatcacat cgcgcagttg tttgcactgc acatatgaga ggtttacgaa 780 agagagtgga ctttcggtgc gataaatgga ccgttgtgtg tctacagcat ctcgccagga 840 cggacaagtg gactaaccaa gttcgtgcta ctgatctacg caagggcgat agtggagtta 900 tattgagtaa tactaatctc aaaggaaact ttgggagaag ctcggagggc ctattcatag 960 tgcgtgggtc gcacgaagga aaaatctatg atgcacgttc caaggttacc caaggggtta 1020 tggattcaat ggttcagttc tcaagcgctg aaagcttttg gaagggattg gatggcaatt 1080 gggcacaaat gagataccct acagatcata catgtgtggc aggcttacca gttgaagact 1140 gtggcagagt tgcagcgata atgacacaca gtattttacc gtgctataag ataacctgcc 1200 ctacctgtgc ccaacaatat gccaacttgc cagccagtga cttacttaag atattacaca 1260 agcacgcaag tgatggttta aatcgattgg gggcagacaa agaccgcttt gtgcatgtca 1320 aaaagttctt gacaatctta gagcacttaa ctgaaccggt tgatctgagt ctagaaattt 1380 tcaatgaagt attcaagtct ataggggaga agcaacaatc acctttcaaa aacctgaata 1440 ttctgaataa tttctttttg aaaggaaagg aaaatacagc tcgtgaatgg caggtggctc 1500 aattaagctt acttgaattg gcaagattcc aaaagaacag aacggataat atcaagaaag 1560 gagacatctc gttctttagg aataaactat ctgccaaagc aaattggaac ttgtatcttt 1620 catgtgataa ccagctggat aagaatgcaa acttcctgtg gggacagagg gaatatcatg 1680 ctaagcgatt tttctcgaac tatttcgagg aaattgatcc agcgaagggc tattcagcat 1740 acgaaaatcg tttgcatccg aatgggacaa gaaaacttgc aattggaaac ctaattgtac 1800 cacttgatct ggctgagttt aggcggaaga tgaaaggtga ttataaaaga cagccagggg 1860 tgagtaagaa gtgcacgagc tcgaaggatg gaaactacgt gtatccctgt tgttgcacta 1920 cacttgatga tggctcagct gttgaatcaa cattttaccc gccaactaag aagcacctcg 1980 taataggcaa tagtggcgat caaaagtatg ttgacttacc aaaagggaat tctgagatgt 2040 tatatattgc caggcaaggc ttctgttaca ttaacatttt cctcgcgatg ttaattaaca 2100 ttagtgagga agatgcaaag gatttcacta agaaggttcg tgacatgtgt gtgccaaagc 2160 ttggaacctg gccaaccatg atggatctgg ctacaacttg tgctcaaatg aaaatatttt 2220 accctgatgt tcatgatgca gaactgccta gaatactagt cgatcacgaa acgcagacat 2280 gccatgtggt tgactcgttt ggctcacaaa caactgggta tcatattttg aaagcatcta 2340 gcgtgtccca acttatttta tttgctaatg atgagttgga gtctgacatt aagcactata 2400 gagttggtgg tgttcctaat gcatgccctg aacttgggtc cacaatatca cctttcagag 2460 aaggaggagt tataatgtct gagtcggcag cgctgaaact gcttttgaag ggaattttta 2520 gacctaaggt gatgagacag ttgctgttag atgagcctta cctgttgatt ctatcaatat 2580 tatcccctgg catactgatg gctatgtaca ataatgggat ttttgaactt gcggtaaggt 2640 tgtggattaa tgagaaacaa tccatagcta tgatagcatc gctactatca gctttagccc 2700 tacgagtgtc agcggcagaa acacttgtcg cacagaggat tataattgat actgcagcta 2760 cagatctcct tgatgctacg tgcgatgggt tcaacctaca tctaacgtac cccact 2816 //