ID AY742221; SV 1; circular; genomic DNA; STD; VRL; 2549 BP. XX AC AY742221; AF335425; XX DT 13-OCT-2004 (Rel. 81, Created) DT 08-JUL-2005 (Rel. 84, Last updated, Version 3) XX DE Cotton leaf crumple virus - [California] segment DNA-B, complete sequence. XX KW . XX OS Cotton leaf crumple virus - [California] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2549 RA Seo Y.-S., Zhou Y.C., Turini T.A., Cook C.G., Gilbertson R.L., RA Natwick E.T.; RT "Host Plant Resistance and Etiology of the Whitefly-Transmitted Cotton Leaf RT Crumple Disease in the Imperial Valley of California"; RL Unpublished. XX RN [2] RP 1-2549 RA Henry D.M., Seo Y.-S., Gilbertson R.L., Guzman P.; RT ; RL Submitted (10-JAN-2001) to the INSDC. RL Plant Pathology, University of California Davis, One Shields Avenue, Davis, RL CA 95616, USA XX RN [3] RC Sequence update by submitter RP 1-2549 RA Zhou Y.C., Seo Y.-S., Gilbertson R.L.; RT ; RL Submitted (03-SEP-2004) to the INSDC. RL Plant Pathology, University of California Davis, One Shields Avenue, Davis, RL CA 95616, USA XX DR MD5; 000c987eac4c07ebfc8f762606df6522. XX CC On Oct 13, 2004 this sequence version replaced gi:12744929. XX FH Key Location/Qualifiers FH FT source 1..2549 FT /organism="Cotton leaf crumple virus - [California]" FT /segment="DNA-B" FT /mol_type="genomic DNA" FT /clone_lib="USA: California" FT /db_xref="taxon:335399" FT gene 466..1236 FT /gene="BV1" FT CDS 466..1236 FT /codon_start=1 FT /gene="BV1" FT /product="BV1" FT /db_xref="GOA:Q99AU0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q99AU0" FT /protein_id="AAK06854.2" FT /translation="MYSFKSRRGSNYIQARVNSRTPLFKRHSTGKRYGGRRLQPLNVKR FT EDEPRMSTQRIHENQYGSEFTMAHNTAISTYISYPNLGKTEPNRTRSYIKLKRLRFKGT FT VKIERVPTDVAMDGSIPNTEGVFSLIIVVDRKPHLTASGCLHTFDELFGAIIHSHGTLS FT IVPALKDRYYIRHVTKRVLSVEKDNVMVDIEGSIALSNRRFNCWASFKDLDLDSCKGVY FT DNINKNALLVYYSWVSDTVSKASTYVSYDLDYIG" FT gene complement(1273..2154) FT /gene="BC1" FT CDS complement(1273..2154) FT /codon_start=1 FT /gene="BC1" FT /product="BC1" FT /db_xref="GOA:Q99AT9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q99AT9" FT /protein_id="AAK06853.2" FT /translation="MDSQLANPPNAFNYIESQRDEYQLSHDLTEIVLQFPSTAAQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQSSWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVQQRTHFAKFKGKLKLSTAKHSVDIPFKAPTVKILS FT KQFSAKDVDFSHVDYGKWERKLIRSASMNRFGLPGPIEIRPGESWATRSTIGPVNEDAD FT AQSNNEETPYRELHRLGSTVLDPGDSASIVGAHRAESNITMSMAQLNELVRTTVQECIK FT SSCNAPQPKIFK" FT misc_feature 2410..2439 FT /note="common region" XX SQ Sequence 2549 BP; 725 A; 512 C; 548 G; 764 T; 0 other; ctgatggccg cgcgaaggcc tggtgtgcct tttcagccgt tagatttggt gccgtacctt 60 ttcgcgttcc catcttgccc ctggagtccc gagctattta cgaccccctg ccaccgagtc 120 cctttcgtgg agcgctcttc gtccaacacg tgtcccaact tttgcgcatt tttgactacc 180 tgtcgcgcac ttgaattaaa gttgcccttt tatttccttc caattatttt gcggctgagt 240 agtctagata attgtgacaa cttagtgggc aagttgttgt gaggacccta tccgtctggg 300 aaaataattg ggttttcacg tgtaccaatg ggaaataata tgtatagcct atttaatttt 360 ctaaattaaa tagttttagt aattcctata taatagcgtc tactagtctg ggtaaaattc 420 gtataggaaa aaatatttat tattttttaa tttaacctgt tgaatatgta cagtttcaag 480 agtagacgtg gatcaaatta cattcaagca cgtgtaaact cacgcacccc attattcaaa 540 cgacattcca ctggtaagcg ttatggaggt agacgactac agccactgaa tgtgaaaaga 600 gaagatgaac ccagaatgtc gacccaacgc atacacgaga atcaatatgg gtcggaattt 660 acaatggccc acaacacagc catttcgacc tatatctcct atcctaatct gggcaagact 720 gaacccaatc gaaccaggtc gtacatcaag ttgaaacgac tgcgtttcaa gggcacggtc 780 aagattgaac gagttcctac tgacgtggct atggatggtt cgattcccaa cacggaggga 840 gtgttctcat tgatcatagt cgttgaccga aaacctcatt tgactgcatc tggttgccta 900 catacgtttg atgaactatt tggtgcgatt atccacagcc atggaaccct gtctatagtt 960 cccgcgttga aggatcgtta ctacataagg catgtaacta aacgggtact gtccgtcgag 1020 aaagataacg tcatggtgga tattgaagga tccattgctc tctctaatag gcgttttaat 1080 tgttgggcca gttttaaaga tcttgatttg gattcatgta agggtgttta tgataacata 1140 aacaagaatg ccctgttagt atattactca tgggtatcgg atactgtgtc taaagcatcc 1200 acttatgtat cgtatgacct tgattatatt ggataatcaa taataacagg aaaatttgaa 1260 taagaaaaaa tattatttaa atatttttgg ttgaggagca ttacaactac tcttgataca 1320 ttcttggacc gttgtcctaa ccagttcgtt taattgggcc atagacatgg taatgttgga 1380 ctcagcccta tgtgccccta ctattgatgc cgagtcacct ggatccagta cagtggaccc 1440 taacctgtgc aactctctgt aaggtgtctc ttcgttattg gactgtgcgt ccgcatcttc 1500 gttaacgggc ccgatggtac tcctggtcgc ccacgactcc ccaggcctta tttctattgg 1560 gcctggaagc ccaaatctgt tcatggatgc ggacctaatt agtttccttt cccatttacc 1620 ataatctacg tgtgagaaat caacgtcttt agcagagaac tgtttggaaa ggatctttac 1680 cgttggcgcc ttgaacggaa tatcgacgga atgtttggcg gtcgataatt tcagcttccc 1740 tttgaatttt gcgaagtggg tacgctgttg aacattcgta tcagaaactc tgtaatagag 1800 tttccaaggg attgggtctt tgagagagaa gaaggaagct gaaaaatagt ggagatctat 1860 gttacacctg atcggaaaag tccacgacga ttgtaatgat tcattatcag tcatcctctt 1920 gtcatgaatc tccactatca ctgatccggt cgcgttaatt ggcacctgct gcctgtattc 1980 gatgacgcaa tgatcgatct tcatgcaact gcgactgagc ctcgccgtta attgagccgc 2040 cgttgacgga aactgcagaa cgatctcagt taggtcatgg gaaagctgat attcatccct 2100 ttgagactct atataattaa aagcgtttgg gggattagct aattgagaat ccatatagag 2160 aaatatggcc gcgcagcgac gccggctgaa gaatatgaac aaggaacaag atgaacaagg 2220 aagaagatga acaggcaata atttaattaa ttattgttaa taagcataaa ttatgaaaat 2280 aattttgatg gtaatgaaag tattataaat aatatttaag agaaaatatt gttaaggaaa 2340 aatctggtta tgtttatttg ttaaggtata tgggttttta tagaaaccca ggagcatcta 2400 tagtaagaaa cccaggactc aaaaaatgcc tctcaacttc tctcatatgt tgtggagtct 2460 ggagtcccat ttataccata gaaagcattg ggggtatagc atggtaattt cacatcggac 2520 tccataccgc ggccatctat ataatatta 2549 //