ID   AY738105; SV 1; linear; genomic DNA; STD; VRL; 1285 BP.
XX
AC   AY738105;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Indian cassava mosaic virus from India coat protein (AV1) gene, partial
DE   cds; replication associated protein (AC3) and transactivator protein (AC2)
DE   genes, complete cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Indian cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1285
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of Indian cassava mosaic virus in cassava at
RT   Thrissur, Kerala, India";
RL   Unpublished.
XX
RN   [2]
RP   1-1285
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (31-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 51c5e13c21ba27ecb95d040f269867e6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1285
FT                   /organism="Indian cassava mosaic virus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Thrissur"
FT                   /note="begomovirus acronym: ICMV"
FT                   /db_xref="taxon:31600"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q534X8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q534X8"
FT                   /protein_id="AAW50917.1"
FT                   /translation="GKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNE
FT                   PSTATVKNMHRDRYQVLRKWSATVTGGQYASKEQALVRRFFRVNNYVVYNQQEAGKYEN
FT                   HTENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
FT   gene            complement(417..821)
FT                   /gene="AC3"
FT   CDS             complement(417..821)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q534X7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q534X7"
FT                   /protein_id="AAW50918.1"
FT                   /translation="MDSRTGELITAAQAMNGVSIWEVTNPLYFKIIQHDNRPFGLNMDI
FT                   ITIQIRFNHNLRKALGLHQCWMDFKVWTTLQPQTWRFLGVFKTQVLKYLDRLGIICINT
FT                   VVNAVEHVLYNVIAGTDSIEQSNLIKFNVY"
FT   gene            complement(562..969)
FT                   /gene="AC2"
FT   CDS             complement(562..969)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q534X6"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q534X6"
FT                   /protein_id="AAW50919.1"
FT                   /translation="MRPSSPSSSHYTQVPIKVTHRAAKRKAIRRKRVDLNCGCSYYVHI
FT                   NCHNHGFTHRGTHHCSSGDEWRLYLGGNKSPLFQDHSTRQPTVRIEHGHNNHPDTLQPQ
FT                   PEESVGTTSMLDGFQGLDDLTASDLAFLGGI"
FT   gene            complement(899..>1285)
FT                   /gene="AC1"
FT   CDS             complement(899..>1285)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q534X5"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q534X5"
FT                   /protein_id="AAW50920.1"
FT                   /translation="TGKTMWARALGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLK
FT                   HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNSALKAWAI
FT                   KNATFISLVEPLYSGANQGHPQSS"
XX
SQ   Sequence 1285 BP; 329 A; 254 C; 308 G; 394 T; 0 other;
     ggtaagatat ggatggatga aaatattaag accaagaatc atacgaacag tgtgatgttc        60
     tttcttgtaa gggatcgtag gcctgttgat aagccccagg attttggtga agtgtttaat       120
     atgttcgata atgaacctag tacagctacg gtgaagaaca tgcatcgtga tcgctatcaa       180
     gtcctcagga agtggagtgc cactgtcact ggtggtcagt atgcgagcaa ggaacaggct       240
     ttagttaggc gtttttttag agttaataat tatgttgtgt ataaccagca agaggctggc       300
     aagtatgaaa atcataccga gaatgcattg atgctgtaca tggcgtgtac tcatgcctct       360
     aaccctgtat acgctacgct gaagattaga atctacttct acgattcggt cagcaattaa       420
     taaacattaa attttattaa attagattgc tcaatactgt cagtcccagc gattacatta       480
     tataatacat gttctactgc gtttacaacc gtattaatac atataatccc taatctatcg       540
     aggtatttta atacttgggt cttaaatacc cccaagaaac gccaggtctg aggctgtaag       600
     gtcgtccaga ccttgaaatc catccagcat tgatgtagtc ccaacgcttt cctcaggttg       660
     tggttgaagc gtatctggat ggttattatg tccatgttca atccgaacgg tcggttgtcg       720
     tgttgaatga tcttgaaata gaggggattt gttacctccc agatagagac gccattcatc       780
     gcctgagctg cagtgatgag ttcccctgtg cgtgaatcca tggttgtggc agttgatgtg       840
     tacgtagtat gagcacccgc agttgagatc aactctttta cgccggatgg ccttacgctt       900
     agctgctctg tgggtgacct tgattggcac ctgagtatag tggctcgacg agggagatga       960
     aggtcgcatt cttgatagcc caggctttca atgcgctgtt tttttcttcg ttcaagaact      1020
     ctttatagct ggaattgggc cctggattgc agaggaagat agtgggaata cctcctttaa      1080
     tttgaactgg ctttccgtac ttggtgtttg attgccagtc tctctgggcc cccatgaatt      1140
     ctttgaagtg ctttaggtag tggggatcta cgtcatcaat gacgttgtac cacgcatcat      1200
     tgttgtagac cttgggactt aagtctagat gtccacatag ataattatgt ggacccaatg      1260
     cacgggccca catcgtttta ccggt                                            1285
//