ID   AY738103; SV 1; linear; genomic DNA; STD; VRL; 1282 BP.
XX
AC   AY738103;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Papaya leaf curl virus from India coat protein (AV1) gene, partial cds;
DE   replication associated protein (AC3) and transactivator protein (AC2)
DE   genes, complete cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Papaya leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of papaya leaf curl virus in tomato at
RT   Bhubaneswar, Orissa, India";
RL   Unpublished.
XX
RN   [2]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (31-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; e0b5fbb79382d4407c636ae7aadf25e0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1282
FT                   /organism="Papaya leaf curl virus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Bhubaneswar"
FT                   /note="begomovirus acronym: PaLCuV"
FT                   /db_xref="taxon:53260"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q534Y6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Y6"
FT                   /protein_id="AAW50909.1"
FT                   /translation="GKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNE
FT                   PSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYEN
FT                   HSENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(417..821)
FT                   /gene="AC3"
FT   CDS             complement(417..821)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q534Y5"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Y5"
FT                   /protein_id="AAW50910.1"
FT                   /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFTMKEDI
FT                   IKVQIQFNYNLRKALGMHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN
FT                   VIRSVDHVLWNVLQHIVYVEQSYSIKFNIY"
FT   gene            complement(562..966)
FT                   /gene="AC2"
FT   CDS             complement(562..966)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q534Y4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Y4"
FT                   /protein_id="AAW50911.1"
FT                   /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGNRRRRVDLPCGCSYFIALA
FT                   CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNGTPQPSIHNERRHNQSPNTVQLQP
FT                   EESVGDAQVFSSLPNLDDFTASDWSFLKGL"
FT   gene            complement(869..>1282)
FT                   /gene="AC1"
FT   CDS             complement(869..>1282)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q534Y3"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Y3"
FT                   /protein_id="AAW50912.1"
FT                   /translation="TGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLK
FT                   HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWTV
FT                   KNAIFVTLEGPLYSGSNQSAAQASQEGEQTSSR"
XX
SQ   Sequence 1282 BP; 359 A; 236 C; 278 G; 409 T; 0 other;
     gggaagatct ggatggatga aaatattaag accaagaacc acactaacag tgttatgttt        60
     tttttagtta gggatcgtag gcctgtggat aaaccacagg attttggaga ggtatttaac       120
     atgtttgata atgagcccag tacggctact gtgaagaatg ttcatcgtga taggtatcaa       180
     gttcttcgga aatggcatgc aactgttact ggtggacaat atgcgtcaaa ggaacaagcc       240
     ctcgtgaaga agtttgttag ggttaataat tatgttgtat ataaccagca agaagctggc       300
     aagtatgaga atcattctga gaatgcgtta atgttgtata tggcatgtac tcatgcctct       360
     aacccagtgt atgctacttt gaagatacgg atctatttct atgattccgt aacaaattaa       420
     taaatattaa attttattga atatgattgt tctacatata caatgtgttg taatacattc       480
     cataaaacat gatcaactga tctgattaca ttattaatac tgataactcc taaattattt       540
     aaatatttta aaacttgagt cttaaagacc cttaagaaac gaccagtctg aggctgtgaa       600
     gtcatccaga ttcggtagac tagaaaacac ttgtgcatcc ccaacgcttt cctcaggttg       660
     tagttgaact gtatttggac tttgattatg tcttctttca ttgtgaatgg acggttgtgg       720
     tgttccgtta tcttgaaata caggggattt tgaatctccc agataaacac gccattctct       780
     gcttgagctg cagtgatgag ttcccctgtg cgtgaatcca tgattgtgac aggctagtgc       840
     tatgaagtat gaacatccac aagggagatc aacgcgacga cgtctgttcc ccttcttggc       900
     tagcctgtgc tgcactttga ttggaacctg agtagagtgg gccttcgagg gtgacgaaga       960
     tcgcattctt tacagtccaa tttttcagtg cgctattttt ctcttcatcc aagaactctt      1020
     tatagcttga gttgggtcct ggattgcaga ggaagatagt gggaattcct cctttaattt      1080
     gaactggctt tccgtacttg gtatttgatt gccagtccct ttgggctccc atgaattctt      1140
     taaagtgctt taaataatgc ggatcgacgt catcgatgac gttgtaccag gcatcattat      1200
     tgtagacctt aggactaagg tctaagtgac cacacaggta attatgtgga cccaaagacc      1260
     tagcccacat tgtcttaccc gt                                               1282
//