ID   AY738100; SV 1; linear; genomic DNA; STD; VRL; 1282 BP.
XX
AC   AY738100;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Tomato leaf curl Karnataka virus from India coat protein (AV1) gene,
DE   partial cds; replication associated protein (AC3) and transactivator
DE   protein (AC2) genes, complete cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Tomato leaf curl Karnataka virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of tomato leaf curl Karnatka virus in tomato at
RT   Aurangabad, India";
RL   Unpublished.
XX
RN   [2]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (31-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 3e664417ce85d7ae186e8194633baa8a.
DR   EuropePMC; PMC3550763; 23637479.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1282
FT                   /organism="Tomato leaf curl Karnataka virus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Aurangabad"
FT                   /note="acronym: ToLCKV"
FT                   /db_xref="taxon:220932"
FT   gene            <1..421
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q534Z8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z8"
FT                   /protein_id="AAW50897.1"
FT                   /translation="GKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNE
FT                   PSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQTLVKKFVRVNNYVVYNQQEAGKYEN
FT                   HTENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
FT   gene            complement(417..821)
FT                   /gene="AC3"
FT   CDS             complement(417..821)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q534Z7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z7"
FT                   /protein_id="AAW50898.1"
FT                   /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFLMNQDI
FT                   ITVQVQFNHNLRKVLGIHKWFLVYGIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINN
FT                   VIRAVDHVLWNVLHHVVYVDQTYSIKFNIY"
FT   gene            complement(562..966)
FT                   /gene="AC2"
FT   CDS             complement(562..966)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q534Z6"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z6"
FT                   /protein_id="AAW50899.1"
FT                   /translation="MRPSSPSKAHSTQVPIKVKHRIAKKRTRRRRVDLPCGCSYFIALA
FT                   CHDHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDNRASQPAIPDEPRHNHRPSTVQSQP
FT                   EESAGDTQMVPSLRNLDDLTASDWSFLKGI"
FT   gene            complement(869..>1282)
FT                   /gene="AC1"
FT   CDS             complement(869..>1282)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q534Z5"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z5"
FT                   /protein_id="AAW50900.1"
FT                   /translation="TGKTMWARSLGTTYYLCGHLNLSQKVYSNDAWYNVIDDVDPHYLK
FT                   HFKEFMGAQRDWQSNIKYQKPVQIKGGIPTIFLCNPGPDSSYKEFLDEEKNSKLKNWAI
FT                   KNATFVTLEGPLYSGTNQSEAQDSQEEDQTSTS"
XX
SQ   Sequence 1282 BP; 342 A; 244 C; 291 G; 405 T; 0 other;
     gggaagatat ggatggatga gaacatcaag actaagaatc acacgaacag tgtcatgttt        60
     tttcttgttc gtgaccgtcg tcctactgat aagccacaag attttggaga ggtgttcaat       120
     atgtttgaca acgagcctag cactgctact gttaagaata tgcacagaga tcgttatcaa       180
     gtgttgagga agtggcatgc aactgtcacc ggtggacagt acgcttcaaa ggaacagaca       240
     ttagtgaaga agtttgttag ggtcaataat tatgttgttt ataaccagca agaagctggg       300
     aaatatgaga atcataccga gaatgcattg atgttgtata tggcgtgtac tcacgcctct       360
     aaccctgtgt atgctacttt gaagatacgg atctattttt atgattcagt atcgaattaa       420
     taaatattga attttattga atatgtttgg tctacatata caacgtggtg taatacattc       480
     cataatacat gatcaacggc tctaattaca ttattaatac tgataactcc taaattattt       540
     aaatacttaa gcacttgggt cttaaatacc cttaagaaac gaccagtcgg aggctgtgag       600
     gtcatccaga ttccgtagac taggaaccat ttgtgtatcc ccagcacttt cctcaggttg       660
     tgattgaact gtacttggac ggtgattatg tcttggttca tcaggaatgg ccggttgtga       720
     tgctctgtta tcttgaaata taggggattt tgaatctccc agataaacac gccattctct       780
     gcttgagctg cagtgatgag ttcccctgtg cgtgaatcca tggtcgtggc aggctaatgc       840
     tatgaagtaa gaacagccgc acggtagatc aactcgtcga cgtctggtcc tcttcttggc       900
     tatcctgtgc ttcactttga ttggtacctg agtagagtgg gccttcgagg gtgacgaagg       960
     tcgcattctt tatagcccag ttttttagtt tagaattctt ttcttcatcc aagaattctt      1020
     tatagctgga atcgggtcct ggattgcaga ggaagattgt gggaattccg cctttaattt      1080
     gaactggctt ctggtacttt atatttgatt gccagtccct ttgggccccc atgaattcct      1140
     taaagtgctt taggtagtgg gggtctacgt catcaattac gttataccag gcatcattac      1200
     tgtagacctt ttggctaagg tttagatgac cacacagata atatgtggtc ccaagtgatc      1260
     tggcccacat agtcttaccc gt                                               1282
//