ID   AY738099; SV 1; linear; genomic DNA; STD; VRL; 1282 BP.
XX
AC   AY738099;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Begomovirus sp. CR-2004-4 coat protein (AV1) gene, partial cds; replication
DE   associated protein (AC3) and transactivator protein (AC2) genes, complete
DE   cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Begomovirus sp. CR-2004-4
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of a begomovirus in Ageratum conyzoides at
RT   Bangalore, India";
RL   Unpublished.
XX
RN   [2]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (13-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 06a9b71828da3a615fb71068861eac74.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1282
FT                   /organism="Begomovirus sp. CR-2004-4"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Bangalore"
FT                   /db_xref="taxon:307811"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q535A2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A2"
FT                   /protein_id="AAW50893.1"
FT                   /translation="GKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNE
FT                   PSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVKVNNYVVYNQQEAGKYEN
FT                   HSENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(417..821)
FT                   /gene="AC3"
FT   CDS             complement(417..821)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q535A1"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A1"
FT                   /protein_id="AAW50894.1"
FT                   /translation="MDSRTGGYITAAQAENGVYIWEIQNPLYFKITEHHNRPFPMNQDI
FT                   MKIQIQFNYNLRKALGIHKCFLTFRIWMTSQPQTGRFLRVFRTQVLKYLNNVGVISINN
FT                   VIRAVDHVLWNLLQHIVYVEQSSSIKFNIY"
FT   gene            complement(562..966)
FT                   /gene="AC2"
FT   CDS             complement(562..966)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q535A0"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A0"
FT                   /protein_id="AAW50895.1"
FT                   /translation="MRPSSPSKSHSTQVPIKVQHRIAKKNNRRRRVDLPCGCSYFIALA
FT                   CHNHGFSHRGVHHCSSSREWRVYLGDTKSPLFQDNGAPQPPISNESRYHENPNPVQLQP
FT                   EESVGNSQMLSDLPDLDDFTASDWSFLKSI"
FT   gene            complement(869..>1282)
FT                   /gene="AC1"
FT   CDS             complement(869..>1282)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q534Z9"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z9"
FT                   /protein_id="AAW50896.1"
FT                   /translation="TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLK
FT                   HFKEFMGAQSDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALKNWAL
FT                   KNATFVTLEEPLYSSTHQSPTQDSEEEQQTTES"
XX
SQ   Sequence 1282 BP; 337 A; 240 C; 295 G; 410 T; 0 other;
     ggtaagatat ggatggatga gaatatcaag accaagaatc acacgaacag tgtcatgttt        60
     tttcttgttc gtgatcgaag acctgttgat aagcctcaag attttggaga ggtgttcaat       120
     atgtttgata atgagcctag cactgctact gttaagaata tgcacagaga tcgttatcag       180
     gtgttgagga agtggcacgc aactgtcact ggtggtcagt atgcatcgaa ggagcaggcg       240
     ttagttaaaa aatttgttaa agttaataat tatgttgtgt ataaccagca agaggctggg       300
     aagtatgaga atcattctga aaatgcatta atgttgtata tggcgtgcac gcacgcctct       360
     aatcctgtgt atgctacgtt gaagatacgg atctattttt atgattcggt cacaaattaa       420
     taaatattga attttattga tgatgattgt tctacgtata caatgtgttg caatagattc       480
     cataatacat gatccactgc tctaattaca ttgttaatac taataactcc cacattattt       540
     aagtacttga gtacttgtgt cctaaatact cttaagaaac gaccagtctg aggctgtgaa       600
     gtcatccaga tccggaaggt cagaaagcat ttgtgaattc ccaacgcttt cctcaggttg       660
     taattgaact ggatttggat tttcatgata tcttgattca ttggaaatgg gcggttgtgg       720
     tgctccgtta tcttgaaata aaggggattt tgtatctccc agatatacac gccattctct       780
     gcttgagctg cagtgatgta cccccctgtg cgagaatcca tggttatgac aggcgagggc       840
     tatgaagtat gagcagccgc acggtagatc aactctccgt cgtctgttgt tcttcttcgc       900
     tatcctgtgt tggactttga tgggtacttg agtagagtgg ctcttcgagg gtgacgaagg       960
     tcgcattctt cagagcccag tttttaagcg cactgttttt ctcttcttcc agatactctt      1020
     tataacttga attgggtcct ggattgcata ggaagatagt gggaattccg cctttaattt      1080
     gaacaggttt cccgtacttg gtgttgcttt gccagtcact ttgggccccc atgaactctt      1140
     taaagtgctt tagatagtgc ggatcgacgt catcaatgac gttataccag gcatcattac      1200
     tgtacacctt tggacttagg tcgagatggc cgcacaaata attgtgtggt cctaatgacc      1260
     tggcccacat agtcttccca gt                                               1282
//