ID   AY738098; SV 1; linear; genomic DNA; STD; VRL; 1288 BP.
XX
AC   AY738098;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Begomovirus sp. CR-2004-3 coat protein (AV1) gene, partial cds; replication
DE   associated protein (AC3) and transactivator protein (AC2) genes, complete
DE   cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Begomovirus sp. CR-2004-3
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of a begomovirus in Malvastrum at Panipat,
RT   India";
RL   Unpublished.
XX
RN   [2]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (13-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 55a32a9343a9a170c1a0755d5b425cee.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1288
FT                   /organism="Begomovirus sp. CR-2004-3"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Panipat"
FT                   /db_xref="taxon:307810"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q535A6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A6"
FT                   /protein_id="AAW50889.1"
FT                   /translation="GKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVSNMFDNE
FT                   PSTATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYEN
FT                   HSENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(423..827)
FT                   /gene="AC3"
FT   CDS             complement(423..827)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q535A5"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A5"
FT                   /protein_id="AAW50890.1"
FT                   /translation="MDSRTGEPITAAQAWSGAYTGSFQIPLYFKILSHDNRPFTMNMDS
FT                   IKIRIQFNYNLRRARGVHKCFLTYRIWTTLRPPTGLFLRVFKTQVLKYLNNLGVISINS
FT                   IIMAVEHVLYNRIEQTMYVEQSSEIKFDLY"
FT   gene            complement(520..972)
FT                   /gene="AC2"
FT   CDS             complement(520..972)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q535A4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A4"
FT                   /protein_id="AAW50891.1"
FT                   /translation="MRFSSPSKDHCTPVPIKVQHREAKRVHRRRRVDLECGWSYFLSIN
FT                   CFNHGFTHRGTHHCSSSMEWRLYWELPNPPLFQDPQPRQPAIHDEHGQYKDQNPIQLQP
FT                   SESSGSAQMFSYLPNLDDLTPSDWSFLKGIQDPSPQVSQQSGCNLN"
FT   gene            complement(869..>1288)
FT                   /gene="AC1"
FT   CDS             complement(869..>1288)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q535A3"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A3"
FT                   /protein_id="AAW50892.1"
FT                   /translation="TGKTMWARSLGQHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLK
FT                   HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWAL
FT                   KNAIFVTLEGPLYSGSNQSTAQGSQEGTQEEESRS"
XX
SQ   Sequence 1288 BP; 341 A; 258 C; 299 G; 390 T; 0 other;
     ggtaagattt ggatggatga aaacataaag tccaaaaatc acactaacaa tgtgatgttc        60
     ttcttggtcc gtgatcgacg gcctgtggat aagcctcagg attttggaga ggtctccaac       120
     atgtttgaca acgagcccag caccgctact gtcaagaatg ttcatcgaga tcgctaccaa       180
     gtgttgagga aatggtatgc aacagtaacg ggtggtcaat atggagctaa ggaacaggca       240
     ttggtcaaga agtttgtccg agttaacaat tatgttgttt acaatcagca agaggcaggg       300
     aagtatgaga atcattctga gaatgccctt atgttgtata tggcatgtac ccatgcctct       360
     aatccagttt acgctactct taaaattagg atttacttct acgattctgt aaccaattga       420
     tattaataaa gatcgaattt tatttctgaa gattgctcta catacatagt ttgttctatt       480
     ctattgtaca atacatgttc tacagccata ataattgaat taattgagat tacacccaga       540
     ttgttgagat acttgaggac ttgggtcttg aataccctta agaaaagacc agtcggaggg       600
     cgtaaggtcg tccagattcg gtaggtaaga aaacatttgt gcactccccg agctctccga       660
     aggttgtagt tgaattggat tctgatcttt atactgtcca tgttcatcgt gaatggccgg       720
     ttgtcgtggc tgaggatctt gaaatagagg gggatttgga agctcccagt ataggcgcca       780
     ctccatgctt gagctgcagt gatgggttcc cctgtgcgtg aatccatggt tgaagcagtt       840
     tatagataga aaataagacc acccgcattc aagatcgact ctcctcctcc tgtgtaccct       900
     cttggcttcc ctgtgctgta ctttgattgg aaccggagta cagtggtcct tcgagggtga       960
     cgaaaatcgc atttttgaga gcccaattct ttaatgcggt gttcttgtcc tcgtcgagga      1020
     attctttata actgctgttg ggaccaggat tgcataggaa gattgtcggt atgccgcctt      1080
     taatttgaac tggcttaccg tacttggtat ttgattgcca gtccctttgg gcccccatga      1140
     actctttaaa gtgcttgagg aagtgcggat ctacgtcatc aatgacgtta taccatgcgt      1200
     cgttactata gacttttggg cttagatcca aatgcccaca taagtaatta tgttggccta      1260
     atgacctagc ccacatagtt ttacccgt                                         1288
//