ID   AY738097; SV 1; linear; genomic DNA; STD; VRL; 1288 BP.
XX
AC   AY738097;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Begomovirus sp. CR-2004-2 coat protein (AV1) gene, partial cds; replication
DE   associated protein (AC3) and transactivator protein (AC2) genes, complete
DE   cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Begomovirus sp. CR-2004-2
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of a begomovirus in Malvastrum at Belgaum,
RT   India";
RL   Unpublished.
XX
RN   [2]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (13-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 6b094c1c3af70e9f235e6026a29e2fed.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1288
FT                   /organism="Begomovirus sp. CR-2004-2"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Belgaum"
FT                   /db_xref="taxon:307809"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q535B0"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q535B0"
FT                   /protein_id="AAW50885.1"
FT                   /translation="GKIWMDENIKTKNHTNTVLFWIVRDRRPSGTPNDFQQVFNVYDNE
FT                   PSTATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYEN
FT                   HTENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT   gene            complement(423..827)
FT                   /gene="AC3"
FT   CDS             complement(423..827)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q535A9"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A9"
FT                   /protein_id="AAW50886.1"
FT                   /translation="MDLRTGEPITAAQAWSGAYIWDVPNPLYFKILSHHNRPFTSNMDI
FT                   ITIRIQFNYNLRRALRVHKCFLTFRVWTTLHPQTGLFLRVFKTQVLKYLNNLGVISLNS
FT                   IIRAVDHVLYNKIEQTMYVDQSSEIKFDLY"
FT   gene            complement(520..972)
FT                   /gene="AC2"
FT   CDS             complement(520..972)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q535A8"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A8"
FT                   /protein_id="AAW50887.1"
FT                   /translation="MRSSSPSKDHCTQVPIKVQHREAKRHNRRRRVDLECGCSYYLSIN
FT                   CHNHGFTHRGTHHCSSSMEWRLYLGRSKSPIFQDPKPPQPAIHEQHGHNNDQNPIQLQP
FT                   SESSASAQMFSDLPSLDDLTPSDWSFLKGIQDTSPQVSQQSGCNLT"
FT   gene            complement(869..>1288)
FT                   /gene="AC1"
FT   CDS             complement(869..>1288)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q535A7"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q535A7"
FT                   /protein_id="AAW50888.1"
FT                   /translation="TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLK
FT                   HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNIALKNWAV
FT                   KNAIFVTLEGPLYSGTNQSTTQGSQEAQQEEESRS"
XX
SQ   Sequence 1288 BP; 338 A; 249 C; 297 G; 404 T; 0 other;
     gggaaaattt ggatggacga gaacatcaag accaagaatc atactaatac tgttctgttt        60
     tggatcgtga gagataggcg tccatcagga actccgaacg attttcagca agtgttcaat       120
     gtttatgaca acgagccctc tacggctact gtgaagaacg accagcgtga tcgttttcag       180
     gtgttaagga ggttccaagc aacagtcaca ggtggtcaat atgctgctaa ggaacaggct       240
     ataattagga aattctatcg tgttaacaat tatgtggttt ataatcatca ggaagctggg       300
     aagtatgaga atcacactga gaatgcttta ttgttgtata tggcatgtac tcatgcctct       360
     aatcctgtgt atgctacttt gaaagttaga agctacttct acgattctgt aaccaattga       420
     tattaataaa gatcgaattt tatttctgaa gattgatcta catacatagt ttgttctatt       480
     ttattgtaca atacatgatc tacagctcta ataattgaat taagtgagat tacacccaga       540
     ttgttgagat acttgaggac ttgtgtcttg aataccctta agaaaagacc agtctgaggg       600
     tgtaaggtcg tccagactcg gaaggtcaga aaacatttgt gcactcgcag agctctccga       660
     aggttgtaat tgaattggat tctgatcgtt attatgtcca tgttgctcgt gaatggccgg       720
     ttgtggtggc ttaggatctt gaaatatagg ggatttggaa cgtcccaaat ataggcgcca       780
     ctccatgctt gagctgcagt gatgggttcc cctgtgcgta aatccatggt tgtggcagtt       840
     gatagacaaa taataagaac acccgcattc aagatcgact ctcctcctcc tgttgtgcct       900
     cttggcttcc ctgtgttgta ctttgattgg tacctgagta caatggtcct tcgagggtga       960
     cgaagatcgc attctttact gcccagtttt ttaatgcgat gttcttttcc tcgtctagat      1020
     attctttata actgctgttg ggacctggat tgcagaggaa gattgtcggt atcccgcctt      1080
     taatttgaac tggtttaccg tacttagtat tggactgcca gtccctttgg gcccccatga      1140
     actctttaaa gtgcttgagg aagtgcggat cgacgtcatc aatgacgtta taccatgcgt      1200
     cgttgctgta gacctttggg cttagatcta ggtgaccaca taaatagtta tgtgggccta      1260
     atgacctagc ccacatcgtt ttacccgt                                         1288
//