ID   AY738096; SV 1; linear; genomic DNA; STD; VRL; 1288 BP.
XX
AC   AY738096;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Begomovirus sp. CR-2004-1 coat protein (AV1) gene, partial cds; replication
DE   associated protein (AC3) and transactivator protein (AC2) genes, complete
DE   cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Begomovirus sp. CR-2004-1
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of a begomovirus in Okra (Bhendi)at Karnal,
RT   India";
RL   Unpublished.
XX
RN   [2]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (13-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 2fb0214f32ffbda3a650095bccfa32e1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1288
FT                   /organism="Begomovirus sp. CR-2004-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Karnal"
FT                   /db_xref="taxon:307808"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q535B4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q535B4"
FT                   /protein_id="AAW50881.1"
FT                   /translation="GKIWMDENIKTKNHSNSVMFFLVRDRRPVDKPQDFGEVFNMFDNE
FT                   PSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYEN
FT                   HTENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(423..827)
FT                   /gene="AC3"
FT   CDS             complement(423..827)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q535B3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q535B3"
FT                   /protein_id="AAW50882.1"
FT                   /translation="MDSRTGERITAAQAKNGVYIWKGPNPLYFKILNHDNRPFTTNMDI
FT                   ITLRIHFNYNLRKALGIHKCFLTFRIWTALHPPTGLFLRVFKTQVLKYLNNLGVISINL
FT                   VIKAVEHVLYDVINQTMYVDQYSDIQFKLY"
FT   gene            complement(520..972)
FT                   /gene="AC2"
FT   CDS             complement(520..972)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q535B2"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q535B2"
FT                   /protein_id="AAW50883.1"
FT                   /translation="MRSSSPSNNHCTQVPIKVQHREAKRRHRRRRVDLECGCSYYLSIN
FT                   CHNHGFSHRGTHHCSSSKEWRLYLEGSQSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT                   TESSGNTQVFSNLPNLDGLTPSDWSFLKGIQNPSPQISQQSRCNLD"
FT   gene            complement(869..>1288)
FT                   /gene="AC1"
FT   CDS             complement(869..>1288)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q535B1"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q535B1"
FT                   /protein_id="AAW50884.1"
FT                   /translation="TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFPK
FT                   HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWAD
FT                   KNAIFITLEQPLYSGTNQSTAQGSEETPQEEESRS"
XX
SQ   Sequence 1288 BP; 343 A; 242 C; 306 G; 397 T; 0 other;
     gggaagatat ggatggacga gaacatcaag accaagaacc attcgaattc tgtgatgttt        60
     ttccttgttc gtgatcgacg accggtagat aaaccacaag attttggtga agtatttaat       120
     atgtttgata acgagcctag tacggcgacc gtgaagaaca tgcataggga ccggtaccag       180
     gtgttgagga aatggcatgc aaccgttact ggtggacaat atgcgagtaa ggagcaggct       240
     ttggtcaaga agttcgttag ggttaacaac tacgttgttt acaaccagca ggaagcagga       300
     aaatacgaga atcacaccga gaatgcattg atgctttaca tggcttgtac tcatgctagc       360
     aacccagtgt atgctactct taagattaga atatattttt atgactctgt aacgaactaa       420
     tattaataaa gtttaaattg tatatctgaa tattggtcta catacattgt ttgattaatt       480
     acatcgtaca atacatgttc aacggcttta ataactaaat taatcgagat tacacctaga       540
     ttgttgagat atttgaggac ttgggttttg aataccctta agaaaagacc agtcggaggg       600
     tgtaaggccg tccagattcg gaaggttaga aaacacttgt gtattcccag agctttccgt       660
     aggttgtagt tgaaatggat cctgagtgtt attatgtcca tgttcgtcgt gaatggacgg       720
     ttgtcgtggt tgaggatctt gaaatagagg ggattgggac ccttccagat atagacgcca       780
     ttctttgctt gagctgcagt gatgcgttcc cctgtgcgag aatccatggt tgtggcagtt       840
     aattgataga taataagaac acccgcattc aagatctact ctcctcctcc tgtggcgtct       900
     cttcgcttcc ctgtgctgta ctttgattgg tacctgagta cagtggttgt tcgagggtga       960
     tgaagatcgc attcttgtct gcccagttct ttagtgcgtt gtttttttcc tcgtccagga      1020
     attctttata actgctgttg ggaccaggat tgcagaggaa gattgttggt attccgcctt      1080
     taatttgaac tggcttcccg tacttggtat tagattgcca gtccctttgg gcccccatga      1140
     actctttaaa gtgcttgggg aagtgcggat caacgtcatc aatgacgtta taccaagcgt      1200
     cgttactgta tacctttgga cttagatcta aatgcccaca taaatagtta tgtgggccta      1260
     aagacctagc ccacatagtc tttcctgt                                         1288
//