ID AY730036; SV 2; circular; genomic DNA; STD; VRL; 2643 BP. XX AC AY730036; XX DT 22-SEP-2004 (Rel. 81, Created) DT 26-JUL-2005 (Rel. 84, Last updated, Version 4) XX DE Indian cassava mosaic virus isolate Mah-2 segment DNA B, complete sequence. XX KW . XX OS Indian cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2643 RX DOI; 10.1007/s00705-005-0520-2. RX PUBMED; 15824887. RA Rothenstein D., Briddon R.W., Haible D., Stanley J., Frischmuth T., RA Jeske H.; RT "Biolistic infection of cassava using cloned components of Indian cassava RT mosaic virus"; RL Arch. Virol. 150(8):1669-1675(2005). XX RN [2] RP 1-2643 RA Rothenstein D.; RT ; RL Submitted (15-AUG-2004) to the INSDC. RL Molekularbiologie und Virologie der Pflanzen, University of Stuttgart RL Biologisches Institut, Pfaffenwaldring 57, Stuttgart 70550, Germany XX RN [3] RC Sequence update by submitter RP 1-2643 RA Rothenstein D.; RT ; RL Submitted (02-MAR-2005) to the INSDC. RL Molekularbiologie und Virologie der Pflanzen, University of Stuttgart RL Biologisches Institut, Pfaffenwaldring 57, Stuttgart 70550, Germany XX DR MD5; 0326e14f30965b13cc9cce1ad36b6358. DR EuropePMC; PMC1079959; 15784145. XX CC On Mar 2, 2005 this sequence version replaced gi:52219384. XX FH Key Location/Qualifiers FH FT source 1..2643 FT /organism="Indian cassava mosaic virus" FT /segment="DNA B" FT /lab_host="Nicotiana tabacum" FT /isolate="Mah-2; Maharastra-2" FT /mol_type="genomic DNA" FT /country="India:Maharashtra" FT /db_xref="taxon:31600" FT CDS 280..1062 FT /codon_start=1 FT /product="BV1 protein" FT /db_xref="GOA:Q643X4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q643X4" FT /protein_id="AAU29489.2" FT /translation="MRRGAYTPRSTPFSRDRRSYNAGKGRSFRSYRRRGPVRPLARRKL FT FGDDHARAFTYKTLSEDQFGPDFTMYNNNYKSSYISMPAKTRAVSDNRGGDYIKLVNIS FT FTGTVCIKNSQMESDGSPMLGLHGLFTCVLVRDKTPRIYSAAEPVIPFPQLFGSINASY FT ADLSIQDPYKDRFTVIRQVSYPVNTDKGYHMCRFKGSRCFVGRYPIWTSFKDDGGSVDS FT SGLYSNTYKNAILVYYVWLSDVSSQLEMYCKYVTRYIG" FT CDS complement(1071..1931) FT /codon_start=1 FT /product="BC1 protein" FT /db_xref="GOA:Q643X3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q643X3" FT /protein_id="AAU29490.2" FT /translation="MENNSSNAAYLRSERVEYELTNDSTDVKLSFPSLLDNKISLLKGH FT CCKIDHIVLEYRNQVPINATGHVIIEIHDQRLHDGDSKQAEFTIPVQCNCNLHYYSSSF FT FSMKDINPWRVMYRVVDTNVINGVHFCRIQGKLKLSTAKQSNDIQFRSPKIEILSKAFT FT ERDIDFWSVGRKAQQRKLVQGPSLIGSRSMRYAPCSIGPNESWAVRSAVGLNEPWAVKS FT EAGPSIERPYSQLNRLNPDALDPGKSVSQVGSDHFTREDLHDIISKTVDMCLNTSMQSH FT VSKNV" XX SQ Sequence 2643 BP; 684 A; 518 C; 615 G; 826 T; 0 other; accggatggc cgcgcccccc tctttatggt ggcccccccc acgtggagat gtcccccact 60 cagaacgctc gctcaaagct tgggatgcca cgtatgtgtt atttgtactt cgtctcgaag 120 ttatgagtga gggccctatg tgtggatatc taaccgtata ttgtgcgaat ggattaaacg 180 tggcaagatc atgccgttta ttgggaacta tattattatc ctgttgtcta tatatatggg 240 tatgtcgtgt ttcggagatc tgcacatggt ggtttcagga tgagaagagg tgcctatacc 300 ccccgttcta ctccattttc tcgtgaccgg agatcgtata atgccggtaa gggtagatca 360 tttcgttctt accgtcgtcg tggacctgtt cgtccattag ctcgtcggaa actgtttggt 420 gatgaccatg cacgtgcatt cacgtataag accttatcgg aggatcaatt tggaccggac 480 tttaccatgt ataataataa ttataagtca tcgtatatat ctatgcctgc caaaacacgt 540 gccgttagcg ataacagggg aggtgattat atcaaacttg taaatatatc atttacaggt 600 acagtgtgta ttaaaaacag tcagatggag tctgacggaa gcccaatgtt gggcctgcat 660 gggctgttta cttgtgtatt ggtccgggat aagacccctc gtatatattc tgccgctgag 720 cctgtgatac ctttcccaca gttgtttggg tccataaacg cgagctatgc ggatttgtct 780 atacaagacc catataagga tcggttcaca gttatccgtc aggtgtctta tccagttaat 840 acggataagg gttatcatat gtgtcgtttc aaaggcagtc gttgttttgt tggtagatac 900 cctatctgga ctagttttaa agatgatggt ggcagtgtag attcatcggg attatatagt 960 aatacgtata aaaatgccat acttgtatat tatgtatggc ttagcgacgt atcgtcacaa 1020 ttggaaatgt attgtaaata tgtaactcga tatattggtt aataaaaatg ttatacattt 1080 ttggatacat ggctctgcat actcgtattt aaacacatat ctactgtctt gctgatgatg 1140 tcgtgtaagt cctctcgtgt gaagtggtcc gatcctactt gtgatactga ctttcctggg 1200 tccaatgcgt ctgggttgag ccggtttagt tggctgtaag gcctttcaat tgatggccca 1260 gcctcgctct taacggccca tggctcgtta agcccaaccg cgcttctaac ggcccatgat 1320 tcatttgggc ctatggaaca tggagcatat ctcatggatc tggatcctat tagacttggg 1380 ccttggacca gtttcctctg ctgggctttc cgacccactg accagaaatc aatgtccctc 1440 tcagtgaagg ccttgctcag tatctcgatt ttgggagatc ggaactgtat gtcattagac 1500 tgctttgcag ttgacagctt gagttttccc tgtatacggc agaagtggac cccgttgatg 1560 acgttggtgt ctacgaccct gtacataact ctccatgggt ttatgtcctt catggagaag 1620 aacgatgaag aatagtagtg aaggttgcag ttgcattgga cgggaatagt aaattctgcc 1680 tgttttgagt ctccgtcatg cagtctttgg tcgtgaattt caatgatgac atgccctgtg 1740 gcgttaatgg gtacctggtt tctatactct aggacgatgt ggtctatttt gcagcagtga 1800 cctttgagga gcgatatttt gttatccaga agagatggaa agctcaactt gacgtctgtt 1860 gagtcattgg ttaactcata ttcaactctt tcggaacgaa gatacgctgc attgctacta 1920 ttattctcca ttggccccgc aggggaaatg cttaaaatta agcccagtgc agaagatgtg 1980 cataaagcaa agcccaaagc ttaataaata gctaaaggca tatatattat attattgatg 2040 aaaggttaca agagcatcca cgtggcagtg gattaaatac atgaaaagct atacaatata 2100 tttaaaaaaa gttgtgacga cgtcatcttc aacgaatgga accggaaacc ctaatccatc 2160 tctgaggact ctggttaagc cctctagtag tatgtcacat gtttccggtg tcatgtggta 2220 gtaatttttg agtttgtaac cccaatcttc cattttgaag gccatatgta tggctctatc 2280 tatttctggt aacagatcca tatcttgttc ttcgaagtgg aggtaatatg aatttgaacc 2340 agtcgcgatg gaaggttgat gtctgctagt agttttgaat tcgacccaga tcgaattctt 2400 cataatgcga ctggatagtc gcacacattt cttgctgtgt tgcaagaagg aatagttagt 2460 ttgggaagac ataggaagaa tgagaatgat gttgggttta agtgggattt ctctctcctc 2520 aatcggtact cagatagttt agcccctata ttaggtactc aatatataca tgagtaccaa 2580 atggcataga tgtaaataat gggaatataa tttgaattca aaagcggcca tccgtataat 2640 att 2643 //