ID AY727904; SV 1; circular; genomic DNA; STD; VRL; 2691 BP. XX AC AY727904; XX DT 21-SEP-2004 (Rel. 81, Created) DT 27-APR-2025 (Rel. 144, Last updated, Version 3) XX DE Corchorus yellow vein virus isolate Hoa Binh segment DNA B, complete DE sequence. XX KW . XX OS Corchorus yellow vein virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2691 RX PUBMED; 16528050. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Corchorus yellow vein virus, a New World geminivirus from the Old World"; RL J. Gen. Virol. 87(PT 4):997-1003(2006). XX RN [2] RP 1-2691 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-AUG-2004) to the INSDC. RL Science Research Centre, Faculty of Science, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; 561d92bb83f91d2dd6b28e8a50c929f3. XX FH Key Location/Qualifiers FH FT source 1..2691 FT /organism="Corchorus yellow vein virus" FT /segment="DNA B" FT /host="Corchorus capsularis (Jute mallow)" FT /isolate="Hoa Binh" FT /mol_type="genomic DNA" FT /geo_loc_name="Viet Nam" FT /note="submitted name=Corchorus yellow vein virus - [Hoa FT Binh]" FT /db_xref="taxon:333361" FT gene 423..1184 FT /gene="BV1" FT CDS 423..1184 FT /codon_start=1 FT /gene="BV1" FT /product="NSP protein" FT /note="nuclear shuttle protein" FT /protein_id="AAU29408.1" FT /translation="MYTMRYRHGAPLSVRRPIYRRTYVRRFPVRRPPVRRQLSFSNKPA FT DDKMTKQRLHENQYGTQYAISNNTSIPSFVTYPRLGGPSPNRSRDYMKLNRLRYKGTVT FT INNTQPDVTMSGETKIEGVFTMAIVMDRKPHVGPSGSLPKFEELFGANTFSHGSLDIAA FT HLKDRYYVRHVCKRVISMEKDSTILNLTGSMSLSSSRFTCWASFKDLNVDSCNGAYSNV FT AKNAILVYYCWMSDEPSRASTFVSFDLDYLG" FT gene complement(1246..2124) FT /gene="BC1" FT CDS complement(1246..2124) FT /codon_start=1 FT /gene="BC1" FT /product="MP protein" FT /note="movement protein" FT /protein_id="AAU29409.1" FT /translation="MESQLAQAPSSFNYIESHRDEYRLTHDLTEIVLQFPSTAEQWGAT FT VRRRCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASYTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQGTHFAKFKGKLKMSTAKHSVDVIFRSPTVKILS FT KQFTGKDIDFSHVDYGKVERKLVKCESSSRLGLHSAIELRPGESWATRSCIGPDTMETE FT SEVHNRNHPYRELNRLSTSMLDPGDSASMIGASRAESNITLTRAQLQELVSSTVEHCIN FT RNCTPHQAKPL" XX SQ Sequence 2691 BP; 728 A; 562 C; 603 G; 798 T; 0 other; accgtgcagc agcccccgct tttgccgtac gctatagccg ttgcgattat gcaacgtggc 60 ggtattagat accgcccatt gtaggttctg caatacacgc gcgggaaaca tgaaaaaagt 120 aaggaaaaga cgcgcgtcaa tgaaattaaa attggactat acctgacata gttggacacg 180 tggtccattc cttttagttg ctgtacgtct attaacgact gtaatggata accttaacga 240 cgaaggaccc acccattcat tggctatgaa cctatttgat atgacaatac caagtataaa 300 aggactatat ctctttacgt tttcatttga atttgaattg catttcattt ctattagttt 360 tgttaactat attaattgtt ttattctaat atagtctttg acagactcct caacatctaa 420 gcatgtatac tatgcggtat agacatggag ctcctctctc tgtacgacga ccaatttata 480 gacggactta tgtccgtcgg ttcccggtta gacgtcctcc cgtccgacgt cagctctcgt 540 tttccaacaa acccgctgat gataagatga ccaaacagcg tctccatgag aatcaatatg 600 gcacacagta tgccatatcc aacaacactt ctatcccgtc ttttgtgaca tacccacgcc 660 taggtggacc ttctcccaat aggtccaggg attacatgaa gctgaaccgt ctgcggtaca 720 agggtaccgt taccataaac aacacccagc ccgatgttac aatgtctgga gaaaccaaga 780 tagagggtgt attcacaatg gcgattgtga tggaccggaa accacatgtt ggcccatctg 840 gttcgcttcc caagtttgag gagctttttg gtgcaaatac cttcagtcat ggcagtcttg 900 acattgcggc ccatttgaag gaccggtact atgtgcgtca cgtttgtaaa cgggttatat 960 ctatggagaa ggactctacc attttgaact tgactgggtc catgagttta tcttcatcac 1020 gattcacgtg ttgggcctcg ttcaaggatt tgaatgttga tagttgtaat ggggcgtaca 1080 gtaacgtcgc caagaacgcc atacttgtat attattgttg gatgtcggac gaaccgtcac 1140 gtgcatccac gtttgtatcg tttgatttgg attacttggg ttaataaaat tgaattttgt 1200 agttataata gtagagtaac aatttaatat aattaatagt tttatttata atggtttcgc 1260 ctgatggggc gtacaattac gattaataca atgttcgacc gtgctactga ctagttcctg 1320 caactgggct ctagtaagtg ttatgttgga ctcagcccgg gaagcaccga tcattgaggc 1380 ggagtcccct ggatccagca tacttgtgct gagtctgttg agttcacgat acgggtggtt 1440 cctgttgtgc acctcggatt ctgtctccat ggtatcaggc ccaatacagc tacgcgtggc 1500 ccatgattca ccaggcctta attctattgc cgagtgcagg cccagtcgac tggaggactc 1560 gcacttcacc agcttcctct cgaccttgcc gtagtccaca tgggaaaagt cgatatcttt 1620 gccggtgaac tgcttggaga gtatctttac cgtcggggaa cggaatatga catcaacaga 1680 gtgctttgct gtcgacatct tcagtttgcc cttgaatttt gcgaaatggg tcccctgatg 1740 tacattggta tcagataccc tgtagtacag cttccatggg atgggatctt tcagagagaa 1800 gaaagaggcg gagaaatagt gcagatctat gttgcacctt atgggaaagg tgtacgacgc 1860 ctgtaaggac tcgttatccg tcatgcgctt gtcgtgaatc tccactatga cggaccctgt 1920 ggcgttaatc ggtacctgtt gtcggtactc tatgacgcag tggtcgatct tcatgcatcg 1980 acgcctgaca gtcgcacccc actgttccgc cgtagacgga aactgtagaa caatctctgt 2040 taggtcatga gtcagacgat attcgtccct atgtgattct atgtaattaa aagaactagg 2100 agcttgagct aattgtgatt ccatttaaga aaattaggtc gcgcagcgag acaggactaa 2160 ctagatgggt tattaccaaa ctgggtgata aaataagaaa gagatttgcg ataaactatt 2220 tacagagata acagtgtatc cagtaactgg ggaaagagat gaaggtatga tgtcttcctg 2280 gaacgatgga actggttata tagaccaata tagtacggat aatatgttta atctgaaaag 2340 atgtattgtt cataataatt agaaacatga agggtattta tcactaataa cacatattat 2400 gtatcttaaa tatgtttaac tgttataacg cttcttttta ataaatgttt taagtgaaac 2460 gacacaacag cttgcgtttt atatcggtac acaccaaagt ctctgtgtac cgatatatcg 2520 gtacacaata tatactagtg gcctctataa tgctactaag gcgtgcagtt ccacctaggc 2580 gtgggaagaa gggtatttag tgtcttttca ctatttgttt gtaaagggtt tgatatccgc 2640 ataagggtat ttgtgtaact taccacaccg ctgctgcacg cctttaatat t 2691 //