ID AY713380; SV 1; linear; genomic RNA; STD; VRL; 2591 BP. XX AC AY713380; XX DT 18-JAN-2005 (Rel. 82, Created) DT 22-APR-2009 (Rel. 100, Last updated, Version 3) XX DE Apricot pseudo-chlorotic leaf spot virus isolate ARPox1 216 kDa protein DE (ORF1) gene, partial cds; and 51 kDa protein (ORF2) and 22 kDa protein DE (ORF3) genes, complete cds. XX KW . XX OS Apricot pseudo-chlorotic leaf spot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-2591 RX DOI; 10.1094/PHYTO-95-0420. RX PUBMED; 18943045. RA Liberti D., Marais A., Svanella-Dumas L., Dulucq M.J., Alioto D., RA Ragozzino A., Rodoni B., Candresse T.; RT "Characterization of Apricot pseudo-chlorotic leaf spot virus, A Novel RT Trichovirus Isolated from Stone Fruit Trees"; RL Phytopathology 95(4):420-426(2005). XX RN [2] RP 1-2591 RA Liberti D., Marais A., Svanella-Dumas L., Ragozzino A., Candresse T.; RT ; RL Submitted (09-AUG-2004) to the INSDC. RL IBVM, UMR GD2P, Virology Laboratory, INRA, BP81, 71 avenue Edouard RL Bourlaux, Villenave d'Ornon 33883, France XX DR MD5; e3f329415572fa0c6fd537fa366e0783. XX FH Key Location/Qualifiers FH FT source 1..2591 FT /organism="Apricot pseudo-chlorotic leaf spot virus" FT /host="Prunus armeniaca" FT /lab_host="Prunus persica GF305" FT /isolate="ARPox1" FT /mol_type="genomic RNA" FT /country="Italy" FT /db_xref="taxon:307677" FT gene <1..886 FT /gene="ORF1" FT CDS <1..886 FT /codon_start=2 FT /gene="ORF1" FT /product="216 kDa protein" FT /note="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:Q5IJA0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q5IJA0" FT /protein_id="AAW55584.1" FT /translation="KFSPWCRYTEKILSSCLPDNFYVHQGKNFSELEKFAKKFSNGSTC FT VESDYTAFDVSQDHTILAFEVEFLRHVGWDEKIIESYIKMKCTLGCRLGGFAIMRFTGE FT FSTFLFNTLANMAFTFCRYQVPIGTPICFAGDDMCALRDIKEIPNHEHILEKLSLKAKV FT NRTKVPMFCGWRLCSDGLIKEPCLIYERLQVAIENNRLMEVIDSYFLEFSFAYKLGERL FT YSYLEIEQLNYHQVLTRFFIKNKHLLRGESKSNISELIWLSDEDGDAGEGTQVKDRRRG FT YSNRWSEKLQNLF" FT gene 798..2171 FT /gene="ORF2" FT CDS 798..2171 FT /codon_start=1 FT /gene="ORF2" FT /product="51 kDa protein" FT /note="putative movement protein" FT /db_xref="GOA:Q5IJ99" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q5IJ99" FT /protein_id="AAW55585.1" FT /translation="MAMLVRGHKSRIAEGDIPIAGVKSSRIYSDVSPFRRATDLMIHWN FT EFVFKIMPEDIKDSGFRLASIPVVPMTEINQILKKRETTNYVHWGALSISIDALFKKNA FT GVTGQCYVFDKRWTTFDQALLQKFEFNLDKGFATMITSPNFSVALDDPGLTDSICVAVV FT FENLNFKKDNYPISVRVGNMCRFFDSFLSCVKNKDDSNLKLDSSNVENLGLDDFGFDGE FT TEVNELFKYVQAVPTSALHTREFEMPRGFLGLMGKKKVKSFEFSSKSAQERRRRRSQNP FT SRRYNDANWGKNFADVRSTASEDELDTDFGEKERERKGKGIKAGSAYSEGELIDNISSR FT EFLFAQQDKKPQNVSSTESSQQSGCPAEGISGSRGKTPAWKDRGNSGTDTSVNIRKHRN FT SRNLRADRVSKRDGGGEGVGGLHAAAELQPENSGQPDQNVQDILYGWKHQWDDLQAIM" FT gene 1855..2436 FT /gene="ORF3" FT CDS 1855..2436 FT /codon_start=1 FT /gene="ORF3" FT /product="22 kDa protein" FT /note="putative coat protein" FT /db_xref="GOA:Q5IJ98" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q5IJ98" FT /protein_id="AAW55586.1" FT /translation="MSALLNLRNKVDAQLRAFLAQEGRPLHGKTGVTVELILQSIFANI FT AIQGTSEQTEFLNEMVEVKESEDSTLLQSYNLRTVVNLIKMFKTSFTDGNINGMTFRQL FT CEAFAPEARDGLVRLKYMGVFTNLYGTMPEIGGKHPELMFDFNKGLNMLIMDQKRRTLI FT TNMHRRLMQTEHAKSENEAKISAVSTDLCV" FT 3'UTR 2434..2591 XX SQ Sequence 2591 BP; 817 A; 457 C; 618 G; 699 T; 0 other; gaagttcagc ccatggtgca gatacacaga gaaaatactc tccagttgtc tgccggacaa 60 tttttatgtt catcaaggga aaaacttctc tgagctggag aaatttgcaa agaaattctc 120 aaacggatcc acatgtgtgg aatccgacta cacagctttt gatgtttcac aggatcacac 180 aatattggca tttgaagttg agtttctaag gcatgtgggc tgggatgaga aaatcattga 240 gagttacatc aaaatgaaat gcacattagg atgcaggctg gggggatttg ccataatgag 300 attcactgga gagttttcga ctttcctatt caacactctt gctaatatgg cgttcacctt 360 ttgcaggtat caagttccaa ttgggactcc aatatgcttt gctggggatg acatgtgtgc 420 tttaagggac atcaaagaaa ttccaaacca tgagcacata ctggagaaac taagccttaa 480 agccaaggtt aacagaacca aagttccaat gttttgtggc tggcgattgt gttcagatgg 540 cttgattaaa gaaccatgtc tgatatatga gaggcttcaa gtggcaattg aaaacaacag 600 actgatggag gtcatagact cctactttct ggaattttca ttcgcctaca aattagggga 660 gaggctttat tcatatcttg aaattgaaca gttgaattat catcaggtgc tgacaaggtt 720 tttcatcaaa aacaaacatc tgttgagggg ggagtccaaa tcaaacatat ctgaactaat 780 ttggctttct gacgaggatg gcgatgctgg tgaggggaca caagtcaagg atcgcagaag 840 gggatattcc aatcgctgga gtgaaaagct ccagaatcta ttctgacgtg agtcccttta 900 gaagggcgac tgatctaatg atccactgga atgaatttgt gtttaagatc atgcccgaag 960 acatcaagga ctcaggtttc agactcgctt ccataccagt tgttccaatg actgaaatta 1020 atcagatact gaagaagaga gaaacgacca attatgtgca ttggggagct ttgtctatct 1080 caatcgacgc tttgttcaag aagaacgctg gggtgactgg ccagtgttat gtgtttgaca 1140 aaagatggac aacattcgat caagctctgc tgcaaaagtt tgaattcaat ttggataaag 1200 gttttgctac aatgataaca tcgccgaatt tctctgttgc tttggatgat cctggtttga 1260 ctgattcaat ttgcgtggct gtggtgtttg aaaatctgaa tttcaaaaaa gataattatc 1320 caataagtgt tagagtcggt aacatgtgca ggtttttcga cagtttcttg agctgtgtga 1380 aaaacaagga cgattcaaat ctgaaacttg actcatccaa tgtggagaat ctaggacttg 1440 acgactttgg atttgatgga gaaactgaag ttaatgaact ttttaaatac gttcaggctg 1500 tgcccacatc tgccctccac acaagagaat tcgaaatgcc aagagggttt ttgggtctga 1560 tgggtaaaaa gaaagtcaag agctttgagt tttcatccaa atcagcacag gaaagaagaa 1620 gaagaagatc tcagaatcca agtagacggt ataatgatgc caattggggc aaaaattttg 1680 ctgatgttag gtctacagcc agtgaggatg aattagatac tgattttgga gaaaaggaga 1740 gagaaagaaa aggcaaaggg atcaaagctg gatcagctta ctcagaaggg gagctcatcg 1800 ataatatatc ttcaagagaa tttctctttg ctcaacaaga taagaaaccg cagaatgtca 1860 gctctactga atcttcgcaa caaagtggat gcccagctga gggcatttct ggctcaagag 1920 ggaagacccc tgcatggaaa gacaggggta acagtggaac tgatacttca gtcaatattc 1980 gcaaacatcg caattcaagg aacctcagag cagacagagt ttctaaacga gatggtggag 2040 gtgaaggagt cggaggactc cacgctgctg cagagctaca acctgagaac agtggtcaac 2100 ctgatcaaaa tgttcaagac atcctttacg gatggaaaca tcaatgggat gaccttcagg 2160 caattatgtg aggcatttgc tcctgaagca agagacggcc ttgttaggct taaatatatg 2220 ggagttttca ccaatcttta tggaaccatg cctgaaattg gtggtaagca tcctgagctt 2280 atgtttgatt ttaataaagg gttaaatatg ctgataatgg atcagaagag gcgaactcta 2340 atcaccaata tgcatagacg tttgatgcag actgagcatg caaaaagtga gaatgaggca 2400 aagatctcgg ctgtctcgac tgatctctgt gtgtagaagg atcactcgtg tgtggtcgtg 2460 aacaaactct ggaacctgcg agagagtata aagaatcgca gtcaataaaa ggagttattg 2520 gacctaacca atattggagt gtttacatct taaatgaaat agcctataga cttttaaata 2580 ttttcctatc c 2591 //