ID AY705380; SV 1; circular; genomic DNA; STD; VRL; 2751 BP. XX AC AY705380; XX DT 27-JUL-2005 (Rel. 84, Created) DT 27-JUL-2005 (Rel. 84, Last updated, Version 1) XX DE Cotton leaf curl Bangalore virus segment A, complete sequence. XX KW . XX OS Cotton leaf curl Bangalore virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2751 RX DOI; 10.1111/j.1365-3059.2005.01214.x. RX AGRICOLA; IND43736008. RA Chowda Reddy R.V., Muniyappa V., Colvin J., Seal S.; RT "A new begomovirus isolated from Gossypium barbadense in southern India"; RL Plant Pathol. 54(4):570-570(2005). XX RN [2] RP 1-2751 RA Chowda Reddy R.V., Muniyappa V., Colvin J., Seal S.; RT "Molecular characterization of a new species of cotton leaf curl virus from RT Bangalore, India"; RL Plant Pathol. 0:0(2005). XX RN [3] RP 1-2751 RA Chowda Reddy R.V., Muniyappa V., Colvin J., Seal S.; RT ; RL Submitted (03-AUG-2004) to the INSDC. RL Plant Animal and Human Health Group, Natural Resources Institute, RL University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, RL United Kingdom XX DR MD5; 58a451d0db89674ded096f609dc7eeaa. DR EuropePMC; PMC3485178; 23082767. DR EuropePMC; PMC3784899; 24426275. XX FH Key Location/Qualifiers FH FT source 1..2751 FT /organism="Cotton leaf curl Bangalore virus" FT /segment="A" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:307110" FT gene 131..478 FT /gene="AV2" FT CDS 131..478 FT /codon_start=1 FT /gene="AV2" FT /product="CP expression activator" FT /db_xref="GOA:Q49LM3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q49LM3" FT /protein_id="AAW28989.1" FT /translation="MWDPLLNEFPETEHGFRCVLAIKYLQQLSEEYSPDTLGYDLIRDL FT MSILRSRNYVEASCRYRHFYPRVEGASASELRQPLCNPCSCPHCPRHKISHVGEQAHEP FT QAQNVQDVQKP" FT gene 291..1061 FT /gene="AV1" FT CDS 291..1061 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q49LM2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q49LM2" FT /protein_id="AAW28990.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWA FT NRPMNRKPRMYRMYRSLDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGNYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1064..1468) FT /gene="AC3" FT CDS complement(1064..1468) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:Q49LM1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q49LM1" FT /protein_id="AAW28991.1" FT /translation="MDSRTGEPITAAQAWSGVYISEVPNPLYFKILSLPNRPFTNNMDI FT ITIRIQFNYNLRRALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISINS FT IIRAVDHVLYKKIENTMFVDQTSEIKFDLY" FT gene complement(1161..1613) FT /gene="AC2" FT CDS complement(1161..1613) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /db_xref="GOA:Q49LM0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q49LM0" FT /protein_id="AAW28992.1" FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSMEWRLYLGSSKSPIFQDPKPPQPAIHKQHGHNNDQNPIQLQP FT SESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNTGPQVPQQSRCNLN" FT gene complement(1510..2598) FT /gene="AC1" FT CDS complement(1510..2598) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q49LL9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q49LL9" FT /protein_id="AAW28993.1" FT /translation="MHPKRFLINSKNYFLTYPNCSLTKEEALSQLQNLQTPTNKKFIKI FT CRELHENGEPHIHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKDYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNANLDRIFQEPPAPYVSPFSFSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLEGPLY FT SGTNQSSAQGSEETQQEEESRS" FT gene complement(2142..2444) FT /gene="AC4" FT CDS complement(2142..2444) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /note="non-functional or symptom development protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q49LL8" FT /protein_id="AAW28994.1" FT /translation="MGNLIFTCSSSSKGSTSAKIRDSSTWYPQPGQHISIRTFRELNQA FT QMSRTTSTRTETLSSGESFRSMEDQQEEDNRQPTTLTPQRLTREVSQRLLESLRN" XX SQ Sequence 2751 BP; 695 A; 572 C; 642 G; 842 T; 0 other; accggatggc cgcgcgattt ttttgtgggt cccgccacta acacttgtct gccaatcaca 60 tggcgcgctc aaagcttaaa taatttcccg cttattataa gtacttcgtc cctaagtttc 120 tgtttgaaaa atgtgggatc cactgttaaa cgagttcccc gagacggaac acgggtttcg 180 ttgcgtgctt gctatcaaat atcttcaaca attgtctgaa gaatactccc ctgatacgct 240 aggttacgat ttaatccgcg atttaatgtc aattttgcgt tctaggaatt atgtcgaagc 300 gtcctgccga tatcgtcatt tctacccccg cgtcgaaggt gcgtcggcgt ctgaacttcg 360 acagccctta tgcaacccgt gcagttgtcc ccactgtccg cgtcacaaaa tctcgcatgt 420 gggcgaacag gcccatgaac cgcaagccca gaatgtacag gatgtacaga agccttgatg 480 ttccaagagg ctgtgagggt ccatgtaagg tccagtcgtt tgagtctaga cacgatgtag 540 tccatatagg taaggtcatg tgcattagtg atgttacacg tggtactggg ttaacccata 600 gagttggtaa gcgtttttgt gtgaagtctg tctatgtttt gggcaagata tggatggatg 660 agaacatcaa gaccaagaat cacacgaaca gtgtcatttt ttttcttgtt cgtgaccgtc 720 gtcctgttga caagccacaa gattttggag aggtgttcaa tatgtttgac aacgagccta 780 gtactgctac ggtgaagaat atgcatagag atcgttatca ggtgctgagg aagtggcatg 840 caactgttac tggtggacag tacgcctcaa aggaacaggc attagttaag aagtttgtta 900 gggttaataa ttatgttgtt tataaccagc aagaggctgg gaactatgag aatcattctg 960 agaatgcttt gatgttgtat atggcatgta cccatgcctc aaatcctgta tacgctacgc 1020 ttaagatccg tatttatttc tatgattccg taaccaattg atattaataa agatcgaatt 1080 ttatttctga agtttggtct acaaacatgg tgttttctat tttcttgtac aatacatgat 1140 caactgctct aataattgaa ttaattgaga ttacacctag attgttgagg tacttgagga 1200 cctgtgtttt gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc 1260 ggaaggtcag aaaacacttg tgcactccca gagctctccg aaggttgtaa ttgaattgga 1320 ttctgatcgt tattatgtcc atgttgtttg tgaatggccg gttggggagg cttaggatct 1380 tgaaatatag gggatttgga acttccgaga tatagacgcc actccatgct tgagctgcag 1440 tgatgggttc ccctgtgcgt gaatccatgg ttgtggcagt tgatagacaa ataataagaa 1500 cacccgcatt caagatctac tctcctcctc ctgttgcgtc tcttcgcttc cctgtgctga 1560 actttgattg gtacctgagt acaatggtcc ttcaagggtg atgaagatcg cattctttac 1620 tgcccagttc tttagtgctg tgttcttttc ctcgtcgaga aattctttat aactgctgtt 1680 gggacctgga ttgcagagga agattgtcgg tatcccgcct ttaatttgaa ctggcttccc 1740 gtactttgtg ttggattgcc agtccctttg ggcccccatg aactccttaa agtgcttgag 1800 gaaatgcgga tcgacgtcat caatgacgtt ataccaggcg tcgttattgt agaccttggg 1860 actcaggtcc agatgtccgc ataaatagtt atgtggtccc agtgatctgg cccacatcgt 1920 cttccccgtt cgactatctc cctcaattac tatacttcga ggtctaaggg gccgcgcagc 1980 ggcatcgaca acgttatcga tggcccaaac ttcaagttct tctggaactt gatcaaaaga 2040 agaaaaagaa aaaggagaaa cataaggagc tggtggctcc tgaaagatcc tgtctagatt 2100 tgcatttaaa ttatgaaatt gtagtacaaa atctttagga gctagttcct taatgactct 2160 aagagcctct gacttacttc ccgcgttaag cgctgcggcg taagcgtcgt tggctgtctg 2220 ttgtcctcct cttgctgatc ttccatcgat ctgaaactct ccccactcga gagtgtctcc 2280 gtccttgtcg atgtagtcct tgacatctga gcttgattta gctccctgaa tgttcggatg 2340 gaaatgtgct gacctggttg gggataccag gtcgaagaat ctctgatttt ggcacttgta 2400 cttcccttcg aactggatga gcacgtgaat atgaggttcc ccattttcat ggagctctct 2460 gcagatcttg atgaattttt tatttgtagg agtttgtagg ttttgaagtt gggaaagtgc 2520 ttcttctttt gtaagagagc aatttggata agtgaggaaa taatttttgg aattaataag 2580 aaaacgtttc ggatgcatgt tgaccaaata gaggacccga ttgaccagct cttacaactc 2640 tcccctgtat attgggtctc aatatatagt gagacccaaa tggcattgtc gtaattttgg 2700 aatgaaaatc aaaatcctca cgctccaaaa agcggccatc cgtataatat t 2751 //