ID   AY704660; SV 1; linear; genomic DNA; STD; VRL; 1288 BP.
XX
AC   AY704660;
XX
DT   01-AUG-2005 (Rel. 84, Created)
DT   01-AUG-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Cotton leaf curl Multan virus coat protein (AV1) gene, partial cds;
DE   replication enhancer protein (AC3) and transcriptional activator protein
DE   (AC2) genes, complete cds; and replication protein (AC1) gene, partial cds.
XX
KW   .
XX
OS   Cotton leaf curl Multan virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1288
RA   Rajeshwari R., Chowda Reddy R.V., Maruthi M.N., Colvin J., Muniyappa V.;
RT   "Molecular characterization of a begomovirus infecting Hibiscus in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1288
RA   Chowda Reddy R.V., Colvin J., Seal S., Muniyappa V.;
RT   ;
RL   Submitted (30-JUL-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 978c1f977f9008b221c6b4658c26746a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1288
FT                   /organism="Cotton leaf curl Multan virus"
FT                   /segment="DNA-A"
FT                   /host="hibiscus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Bangalore, Karnataka"
FT                   /db_xref="taxon:223252"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q49LQ6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q49LQ6"
FT                   /protein_id="AAW22860.1"
FT                   /translation="GKIWMDENIKTRSHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNE
FT                   PSTATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYEN
FT                   HTENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(423..827)
FT                   /gene="AC3"
FT   CDS             complement(423..827)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:Q49LQ5"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q49LQ5"
FT                   /protein_id="AAW22861.1"
FT                   /translation="MDSRTEEPITAAQATNGVYIWEVPNPLYFKILSHDNRPFTTNMDI
FT                   LTIRIHFNYNTRKALGLHKCFLTFRIWTTLQPQTGLFLRVFKTQVLKYLNNLGVISINL
FT                   VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY"
FT   gene            complement(520..972)
FT                   /gene="AC2"
FT   CDS             complement(520..972)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:Q49LQ4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q49LQ4"
FT                   /protein_id="AAW22862.1"
FT                   /translation="MRSSSHLKDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN
FT                   CHNHGFTHRGTHHCSSSNEWRLYLGGSKSPLFQDPQPRQPSIHDEHGHTHDQDPFQLQH
FT                   SESSGTAQVFSNLPNLDDLTASDWSFLKGIQNPSPQISQQSRCNFN"
FT   gene            complement(869..>1288)
FT                   /gene="AC1"
FT   CDS             complement(869..>1288)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication protein"
FT                   /db_xref="GOA:Q49LQ3"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q49LQ3"
FT                   /protein_id="AAW22863.1"
FT                   /translation="TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLK
FT                   HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAV
FT                   KNAIFITLEGPLYSGTNQSTAQGSEEAQQEEESRS"
XX
SQ   Sequence 1288 BP; 336 A; 236 C; 307 G; 409 T; 0 other;
     ggtaagatat ggatggatga aaatataaag accaggagtc acacgaattc ggtcatgttc        60
     tttttagttc gcgatcgacg acctgttgac aaacctcagg attttggtga ggtatttaat       120
     atgtttgaca acgaacccag tacagcgact gtgaagaata gtcataggga tcgttatcag       180
     gtgttgagga aatggcatgc aaccgttacg ggtggtcaat atgcgagtaa ggaacaggct       240
     ttggtcaaga agtttgttag agttaacaat tatgttgttt acaatcaaca ggaagcagga       300
     aaatacgaga atcatacgga aaatgcgtta atgctttata tggcttgtac ccacgctagc       360
     aaccctgttt atgctacgtt gaagattagg atatattttt atgactctgt aacgaattga       420
     tattaataaa gtttgaattt tatttctgaa tattgatcta catacatagt ttgttggatt       480
     acattataca atacatgttc tacagcttta ataactaaat taattgaaat tacacctaga       540
     ttgttgagat atttgaggac ttgggttttg aataccctta agaaaagacc agtctgaggc       600
     tgtaaggtcg tccagattcg gaaggttaga aaacacttgt gcagtcccag agctttccga       660
     gtgttgtagt tgaaatggat cctgatcgtg agtatgtcca tgttcgtcgt gaatggacgg       720
     ttgtcgtggc tgaggatctt gaaatagagg ggatttggaa cctcccagat atagacgcca       780
     ttcgttgctt gagctgcagt gatgggttcc tctgtgcgtg aatccatggt tgtggcagtt       840
     gattgacaga taataagaac acccgcattc aagatctact ctcctcctcc tgttgcgcct       900
     cttcgcttcc ctgtgctgta ctttgattgg tacctgagta caggggtcct tcaagtgtga       960
     tgaagatcgc attctttact gcccagtttt ttagtgcggt gttcttttcc tcgtctagga      1020
     attctttata actgctgttg ggaccaggat tgcagaggaa gattgttggt atcccgcctt      1080
     taatttgaac tggcttcccg tattttgtgt tggattgcca gtccctttgg gcccccatga      1140
     actctttaaa gtgtttgagg aaatgcggat cgacgtcatc aatgacgttg taccaggcgt      1200
     cgttactgta tactttggga ctcaggtcca gatgtccgca caaatagtta tgtggtccca      1260
     atgacctagc ccacatcgtc tttcctgt                                         1288
//