ID AY702650; SV 1; circular; genomic DNA; STD; VRL; 2777 BP. XX AC AY702650; XX DT 04-SEP-2004 (Rel. 81, Created) DT 04-SEP-2004 (Rel. 81, Last updated, Version 1) XX DE Tomato yellow leaf curl Sardinia virus strain Murcia from Morocco, complete DE genome. XX KW . XX OS Tomato yellow leaf curl Sardinia virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2777 RA EL Mehrach K., Sedegui M., Arifi A., Hatimi A., Tahrouch S., Czosnek H., RA Nakhla M.K., Maxwell D.P.; RT "Sequence of a full-length clone of Tomato yellow leaf curl Sardinia virus RT from Morocco"; RL Unpublished. XX RN [2] RP 1-2777 RA EL Mehrach K., Sedegui M., Maxwell D.P., Nakhla M.K.; RT ; RL Submitted (30-JUL-2004) to the INSDC. RL Plant Pathology, University of Wisconsin, 1630 Linden Dr., Madison, WI RL 53706, USA XX DR MD5; 24ec5faf4c5e291ab159aa6172717627. DR EuropePMC; PMC2224568; 17977971. XX FH Key Location/Qualifiers FH FT source 1..2777 FT /organism="Tomato yellow leaf curl Sardinia virus" FT /strain="Murcia" FT /isolate="sample 28" FT /mol_type="genomic DNA" FT /country="Morocco:Agadir" FT /clone="pMTyM1" FT /note="collected in 2002" FT /db_xref="taxon:123735" FT gene 142..490 FT /gene="V2" FT CDS 142..489 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q66UW3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q66UW3" FT /protein_id="AAU08295.1" FT /translation="MWDPLLNEFPDSVHGLRCMLAIKYLQLVEETYEPNTLGHDLIRDL FT ISVIRARDYAEANRRYINFNARLEGSSKTELRQPVYQPCCCPHCPRHQASIMDLQAHVS FT KAADVQNVQKP" FT gene 302..1078 FT /gene="V1" FT CDS 302..1075 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q66UW1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q66UW1" FT /protein_id="AAU08296.1" FT /translation="MPKRTGDILISTPVSKVRRKLNFDSPYTSRAAAPTVQGIKRRSWT FT YRPMYRKPRMYRMYRSPDVPFGCEGPCKVQSYEQRDDVKHTGVVRCVSDVTRGSGITHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTRPMDFGQVFNMFDNE FT PSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQCLLKRFFKVNTHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1072..1476) FT /gene="C3" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein" FT /db_xref="GOA:Q8B6S7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8B6S7" FT /protein_id="AAU08297.1" FT /translation="MDLRTGEYITAHQATSGVYTFEITNPLYFTITRHNQQPFNSKYNL FT LTFQIRFNHNLRKALGIHKCFLNFRIWTTLQSPTGHFLRVFRFQVYKYLNNIGVISLNN FT VIRAVDYVLFDVFENTIDVIEQHEIKYNLY" FT gene complement(1217..1624) FT /gene="C2" FT CDS complement(1217..1624) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activation protein" FT /db_xref="GOA:Q66UV8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q66UV8" FT /protein_id="AAU08298.1" FT /translation="MQSSSPSTSHCSQIPIKIQHHIAKKRQVRRRRVDLDCGCSYYIHL FT DCINHGFTHRGVHHCASSNEWRLYLRDNKSPIFHDNQTQPTTIQQQIQLTNISNQVQPQ FT LEEGTGDSQMFSQLPHLDDLTVSDWSFFKSL" FT gene complement(1533..2612) FT /gene="C1" FT CDS complement(1533..2612) FT /codon_start=1 FT /gene="C1" FT /product="replication-association protein" FT /db_xref="GOA:Q66UV7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q66UV7" FT /protein_id="AAU08299.1" FT /translation="MAQPKRFQINAKHYFLTFPKCSLSKEEALERLLQLQTPTNKKYIK FT ICRELHEDGQPHLHMLIQFEGKFNCKNNRFFDLVSPTRSAHFHPNIQGAKSSSGVKSYI FT DKDGDVLEWGTFQIDGRSARGGQQTANDTYAKAINAGSKSEALDVIKELAPRDYILQFH FT NINSNLNMVFQVPPAPYVSPFLSSSFDQVPDELEHWVSENVMDAAARPWRPMSIVIEGD FT SRTGKTMWARSSGPHNYLCGHLDLSQKVYSNNAWYNVIDDVDPHYLKHFKEFMGSQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPQSSFKEYLDEEKNQTLKNWAIKNAIFITIHQPL FT FTNTNQDPTPHRQEETSEA" FT gene complement(2165..2455) FT /gene="C4" FT CDS complement(2165..2455) FT /codon_start=1 FT /gene="C4" FT /product="symptom expression protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q66UV6" FT /protein_id="AAU08300.1" FT /translation="MGNLISTCSFSSRVNSTAKITDSSIWYPQPDQHISIRTFRELNQA FT PASSPTSTRTEMFLNGVLSRSTDDLQGEDSRQPMTLTPRQLTQEVSRRLLM" XX SQ Sequence 2777 BP; 754 A; 505 C; 611 G; 907 T; 0 other; accggatggc cgcgctcccc gataaagtag tgggccctac gcagtaattt ttgtcgacca 60 atgaaaatgc agcctcaaag cttaaataat gtatttactt tgttataaac atggcttcta 120 agttttgaaa aaaccatcaa tatgtgggat cctttattaa atgaatttcc agattcagtt 180 catggtctcc gttgtatgct tgcaataaaa tatttgcagc tagttgaaga aacctatgaa 240 cccaatactc tgggtcacga tctaattagg gatctcattt ccgtcattcg tgctcgtgac 300 tatgccgaag cgaacaggcg atatattaat ttcaacgccc gtctcgaagg ttcgtcgaaa 360 actgaacttc gacagcccgt ataccagccg tgctgctgcc cccactgtcc aaggcatcaa 420 gcgtcgatca tggacttaca ggcccatgta tcgaaagccg cggatgtaca gaatgtacag 480 aagccctgat gtcccctttg gttgtgaagg tccttgtaaa gtccagtcgt atgagcagcg 540 tgacgatgtc aagcataccg gtgttgttcg ttgtgttagt gatgtaacta ggggttctgg 600 tattacacat agagtaggta aacggttttg tattaagtca atctatattt tagggaagat 660 ttggatggat gaaaatataa aaaaacaaaa tcatactaac caggtcatgt tctttttagt 720 acgagaccga aggccgtatg gaactagacc tatggatttt ggtcaagttt ttaacatgtt 780 tgataatgaa cctagtacgg ctactgtgaa gaacgattta agggataggt accaagtaat 840 gaggaagttc catgccacgg tggtaggtgg tccgtcaggg atgaaggagc agtgtctgtt 900 gaagaggttt tttaaagtta atacccatgt agtttataat catcaagagc aggcgaagta 960 tgaaaaccat actgagaatg cgttgttgtt gtatatggca tgtactcatg cttctaaccc 1020 agtgtatgct acgttgaaaa tacgtatcta tttttatgat gctgtaacaa attaataaag 1080 attgtatttt atttcatgtt gttcaattac atctattgtg ttctcaaata catcgaataa 1140 gacataatca actgctctaa taacattgtt taatgaaatt acacctatat tattcaaata 1200 cttatacact tgaaacctaa agactcttaa aaaatgacca gtcggagact gtaaggtcgt 1260 ccagatgcgg aagttgagaa aacatttgtg aatccccagt gccttcctca agttgtggtt 1320 gaacctgatt tgaaatgtta gtaagttgta tttgctgttg aatggttgtt ggttgtgtct 1380 ggttatcgtg aaatataggg gatttgttat ctcgaaggta taaacgccac tcgttgcttg 1440 atgcgcagtg atgtactccc ctgtgcgtaa atccatggtt tatgcagtct aaatgtatat 1500 agtacgaaca gccacagtcc agatctaccc ttctacgcct cacttgtctc ttcttggcga 1560 tgtggtgttg gatcttgatt ggtatttgtg aacaatggct ggtggatggt gatgaagatt 1620 gcatttttta tggcccaatt ttttaatgtt tgattttttt cttcgtcgag gtattcttta 1680 aatgatgatt gtgggcctgg attgcagagg aagatagtgg gtatgcctcc tttaatttga 1740 atgggcttcc catactttgt gttgctttgc cagtcccttt gggaccccat gaattcttta 1800 aagtgtttta aataatgcgg gtctacgtca tcaatgacgt tgtaccaagc attattgcta 1860 tatacttttt gactgaggtc aagatgtcca cacaaataat tatgtgggcc tgaggaacgg 1920 gcccacatag tctttcctgt ccggctgtca ccctcaatca ctatactcat cggcctccaa 1980 ggccgcgcag cggcatccat gacgttctcg gaaacccagt gttcaagttc atccggaact 2040 tgatcaaaag aagaagataa aaaaggagaa acatatggtg ccggaggcac ctgaaaaacc 2100 atatttaaat tactatttat attatgaaat tgtaaaatgt aatctctagg ggctaattct 2160 ttaattacat caagagcctc cgacttactt cctgcgttaa ttgccttggc gtaagtgtca 2220 ttggctgtct gctgtcctcc ccttgcagat cgtccgtcga tctggaaagt accccattca 2280 agaacatctc cgtccttgtc gatgtaggac ttgacgccgg agcttgattt agctccctga 2340 atgttcggat ggaaatgtgc tgatctggtt ggggatacca gatcgaagaa tctgttattt 2400 ttgcagttga atttaccctc gaactgaatg agcatgtgga gatgaggttg cccatcttcg 2460 tgtaattctc tgcaaatctt aatgtatttt ttatttgttg gtgtttgtag ttgaagtagt 2520 cgttctaggg cttcttcttt ggagagagaa cattttggga aagttagaaa ataatgtttt 2580 gcatttattt gaaaacgctt aggctgagcc atttggtcaa tgggtaccaa ttgacctcag 2640 attcatttta ttccatgtat tggtagattg gtagctctta tatacctggg tattaaatgg 2700 catgtatgtg aatatgttaa gttatttttt taatttattt taatttttgg aattttagcg 2760 gccatccgtt taatatt 2777 //