ID AY701509; SV 1; linear; genomic RNA; STD; VRL; 3993 BP. XX AC AY701509; XX DT 23-NOV-2005 (Rel. 85, Created) DT 23-NOV-2005 (Rel. 85, Last updated, Version 1) XX DE Yunnan orbivirus segment 1, complete sequence. XX KW . XX OS Yunnan orbivirus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-3993 RX DOI; 10.1099/vir.0.81258-0. RX PUBMED; 16298988. RA Attoui H., Mohd Jaafar F., Belhouchet M., Aldrovandi N., Tao S., Chen B., RA Liang G., Tesh R.B., de Micco P., de Lamballerie X.; RT "Yunnan orbivirus, a new orbivirus species isolated from Culex RT tritaeniorhynchus mosquitoes in China"; RL J. Gen. Virol. 86(Pt 12):3409-3417(2005). XX RN [2] RP 1-3993 RA Attoui H., Mohd Jaafar F., Belhouchet M., De Micco P., De Lamballerie X.; RT ; RL Submitted (29-JUL-2004) to the INSDC. RL Virology, Faculte De Medecine, 27 Boulevard Jean Moulin, Marseille 13005, RL France XX DR MD5; b2102c735ef02f49d51b7025287f7fb7. XX FH Key Location/Qualifiers FH FT source 1..3993 FT /organism="Yunnan orbivirus" FT /segment="1" FT /isolate="YOV-77-2" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:306276" FT CDS 14..3961 FT /codon_start=1 FT /product="VP1" FT /note="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q2YH56" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:Q2YH56" FT /protein_id="AAW28767.1" FT /translation="MAVVVHRQKLTQNAAARILPGIHFNQNEGTTYYYKYSEMQKDKDK FT RTNVERKEVDDNEFNPHKSAKMLYSLPVLREMSWTQLTSSITLEEYSEDTFELLVETAV FT DSSKLDPEEEFLQNYKINSFLQPDGTYVRAFDFVMSRARDECQVYGDVALKHWVALLIE FT LSSTENFTPLGLQVIARFIQRFGEPFHQNTRDLSQVKDEVFIVTIALIFEMCITESFSE FT FNALFRTKEERITHYVFAKKTFQLYDIVRELFRLCIPYPKYINNKLRAVYSWFVKCWGV FT ASDEIIVLKSHGGDDRNSKQVDYIGFERFKNPYSTAIKRSKFFAESKRENIQKVQDMLD FT LVKERSSQNVQAPLIMHFLSNVYEESFNPTEISHVILASYMLSIQTLTGYGRAWIKNKG FT DDPEKMLKPDKNNFVTRLSDMTENFVMQAYREAEEHGYTIVPPESMYSALLRMAKNTSS FT GMSTSVEVPKTYGPKAEKQKTTIRIVSRQKALVLMQEGDKIYKRENMIRKFDSVESYQS FT KGQRDVPIKATRIIYSIHISVLAPQLLLTLPINEYFSQTGGSTRPNAREIGGKVIIGDL FT ESTGSRVIDASDTFRNTADQSIFTLALDYSEYDQHMTPDNFRLGMMNGMRRALSKYHSL FT RYEGMTVEELLEAGYGKGRLVGSFWNGRRHVKKMLLSEYQNLDEQDRVPTEDSPFRFSP FT PGVYLIRNLDLVRTEVKDEDEYVLVSPWDGSDLAKVSTHLSGENTTLVWNSVHNLAAGT FT IIQEELALKAPRLLTVESETYVGDDMLMYTNLNVIRGDAIDKIMETIFETIALFGHEAS FT PAKTTFLPFSAEKTQTHAKQGVYIGQDRMMFISSERKKDIEDVKSYMRANVNVFVTKCS FT RGFSAELAHIILCFKTIFVGYRKFKRTIMESGKLRSRHFDSAEDGYTLCALRHPLTLYL FT PVEWNGYGAHPSALNVVMTPEIFLDSLLMDSFRDELLPIMKICTSAMPSWNETQVDKRR FT LTTITKMSLFSKLARRPVSTVLQHPEARAKVQMLPLQGFGPTEISGTMMHSALLKEPKA FT RTLLSPNYELDFHETFNTWRKEALLKPQGIDLQISMQYCKIFEVVFESGRGSGITRQYF FT PDLNLSPEFKNQKLVIGNRKSNRKRISYVDQIDSILRSDVIMRGFITSNHILAVLEEIG FT IGHSAEDYALIFSMMNLDEKVCEKLGNYIARDKIKFDAQKLNKGGACGDEFSMSLDVCT FT QQMIDDFLVFPHELTQTERDAVNLYASQLIMLRASKGISTAKIHFRATEEHKRQVQRVR FT MGSKALKRRQYRSLCANLRSLSGTIIEQQFL" XX SQ Sequence 3993 BP; 1345 A; 673 C; 878 G; 1097 T; 0 other; gttaaatact tccatggctg ttgtggtaca tagacagaaa ctcactcaaa atgctgctgc 60 tcgaattcta cctggaatac atttcaacca gaatgaaggg acgacttact actacaaata 120 ttccgaaatg caaaaagata aagacaaacg aacaaacgtc gaaagaaaag aagtggatga 180 taatgaattc aaccctcaca aaagtgcgaa aatgttgtat tcattgcccg tattaagaga 240 aatgagttgg acacaattaa catcctcaat tacattggaa gaatattctg aggacacttt 300 tgaattgtta gttgaaacgg ctgttgattc aagtaaactg gatccagaag aagaatttct 360 acagaactat aaaataaaca gctttctaca accagatggg acatatgtgc gagcttttga 420 ttttgtcatg tcacgtgctc gggatgaatg tcaggtatat ggcgatgtag cgttaaagca 480 ctgggtggca cttttaatag aactctcaag cactgaaaac tttacgcctt tgggattgca 540 ggttatagct agattcattc aaagattcgg cgagccgttt catcagaata ctagggattt 600 atcacaggtt aaagacgaag tatttattgt aactatagct ctaatttttg aaatgtgtat 660 tactgaatca ttctctgaat ttaatgcgtt atttaggact aaagaagaaa ggattactca 720 ttatgtattt gcaaagaaaa cttttcaact ttacgatatc gttcgtgaac tattcagatt 780 atgcatacca tatccaaaat atataaataa taaattaaga gcggtttatt catggtttgt 840 gaaatgttgg ggcgtggcat cggatgaaat tatcgtatta aagtcgcatg gaggagatga 900 cagaaacagt aaacaggttg attacattgg atttgaaaga tttaagaatc cgtattctac 960 cgctattaag agatcgaaat tcttcgctga aagtaaaaga gaaaatatcc aaaaggtaca 1020 agatatgctg gatctagtaa aggagagatc gagccagaac gtacaagctc cacttattat 1080 gcatttctta agtaatgtct atgaagaatc ttttaatcct acggaaatat cacacgtcat 1140 cctggcttct tacatgctat caatacagac attaactggc tatggacgtg cttggataaa 1200 gaacaaaggc gacgatcctg agaaaatgtt gaaaccggat aagaataatt ttgtaacccg 1260 tttatctgat atgacagaaa attttgttat gcaagcttat cgtgaagcag aggaacatgg 1320 ttatacgatc gtaccgcctg aatcaatgta tagtgccctg ctacgtatgg caaaaaatac 1380 atcatcagga atgtcaacaa gtgttgaagt cccaaaaact tatggtccaa aagctgagaa 1440 acagaaaact acaataagaa ttgtttcgag acaaaaagcg ctagtgttga tgcaagaggg 1500 agataaaata tataaacgtg agaatatgat taggaaattt gacagtgtag aaagttatca 1560 atcaaaagga caacgtgatg taccaataaa agctactaga attatatatt caatccacat 1620 ctcggtattg gctccacaac tcttattaac gctaccaatt aatgagtatt tttcacagac 1680 gggaggatca acaagaccga atgcgagaga aattggtggc aaggtaatca ttggggattt 1740 agagtcaaca gggtcaagag taattgatgc ttcagataca tttagaaata cggctgacca 1800 aagtatattt acgttagctt tagactattc ggaatatgat caacatatga ccccagataa 1860 ttttcgatta ggtatgatga atggaatgcg tagagcttta tcaaaatatc atagtttaag 1920 atatgaaggt atgaccgttg aagaattgtt agaagctggg tacggaaaag gacgattagt 1980 cggttctttc tggaatggac gaagacatgt aaagaaaatg ctgttgagtg aataccagaa 2040 tttagatgag caggacagag taccaacgga agattcacct ttcagatttt cgccacctgg 2100 cgtgtactta attcgaaatc ttgatttagt gagaactgaa gtaaaagatg aggacgagta 2160 cgtcctagtt tcaccatggg atggcagtga cctagctaaa gtatcgaccc atttatcggg 2220 tgaaaacact acgctcgtct ggaactctgt gcataatctt gcagcaggta caatcataca 2280 agaggaattg gctttgaaag ccccgagatt attaactgtc gaatctgaaa cgtatgtggg 2340 cgatgacatg ttgatgtata caaacctaaa tgtgatacgc ggagatgcta tagacaagat 2400 tatggaaacc atttttgaaa ctattgcttt attcgggcat gaagcttccc cggctaagac 2460 aacctttttg ccattctccg ctgaaaaaac gcagacacac gccaagcaag gagtgtatat 2520 tggtcaagat cgtatgatgt tcatctcgtc ggaaagaaag aaagatattg aagatgtgaa 2580 aagctacatg cgggcgaatg taaatgtgtt cgtgacaaaa tgcagccgtg gtttcagtgc 2640 tgaattggct cacataatcc tttgctttaa aactattttc gtaggctacc ggaaattcaa 2700 gagaactatt atggagagtg gaaagttacg atctcgacat ttcgatagtg ctgaggatgg 2760 atatacattg tgtgctttac gacaccccct aacactatat ttgccagtgg aatggaacgg 2820 ttatggggca catccaagcg ctttaaacgt agttatgacg cctgaaatat ttctagattc 2880 cctacttatg gattcattca gggacgagct gttgccaatc atgaagatat gcacaagtgc 2940 aatgcccagc tggaatgaga cgcaggtaga caaaagaagg ttaaccacca taacgaaaat 3000 gtccttgttc tcgaagttgg cgcgacgtcc ggtctctact gtattgcaac atccagaggc 3060 gcgagcgaag gttcaaatgc tgccactaca aggttttggt ccaaccgaga tatctgggac 3120 gatgatgcat tcagcactat tgaaggaacc taaagcacga actttattga gtcccaatta 3180 cgagttagat tttcatgaga ctttcaacac atggagaaaa gaggcactgc tgaaaccaca 3240 aggaattgat ctacaaattt cgatgcagta ttgcaaaatc ttcgaagttg tttttgagag 3300 cggaagaggc tccggtataa cgcggcaata cttcccagat ttaaacttat cacctgaatt 3360 caaaaatcag aagttggtaa ttggaaacag aaaaagtaat agaaagagaa tttcatatgt 3420 tgatcaaatt gattcaatct tgcggagtga tgtaatcatg cgaggtttca taacttcgaa 3480 tcatatactt gcagtattag aggagattgg aattggacat tctgcagagg actatgctct 3540 cattttttca atgatgaact tagacgaaaa ggtgtgtgag aagctcggga attatattgc 3600 acgagataaa atcaaattcg atgctcagaa acttaataaa ggaggtgcat gtggggacga 3660 attttcgatg tctctagatg tgtgtaccca acagatgatt gatgattttc tcgtgtttcc 3720 acatgaatta acgcagactg aacgagatgc agtaaattta tatgcatcac aattgattat 3780 gttacgtgcg tcaaaaggta tatcgacagc taagatccac tttagggcta cagaggaaca 3840 caagcgacaa gtacagcgtg taaggatggg atcgaaagcg ttgaaaagac ggcagtatcg 3900 gagtttatgt gccaatttgc gatcgttatc aggaacgatt atcgagcagc agtttctgtg 3960 aattcactgt cgtcaaagcg gagtataaag tac 3993 //