ID AY701339; SV 1; linear; genomic RNA; STD; VRL; 3740 BP. XX AC AY701339; XX DT 25-DEC-2005 (Rel. 86, Created) DT 25-DEC-2005 (Rel. 86, Last updated, Version 1) XX DE Liao ning virus segment 1, complete sequence. XX KW . XX OS Liao ning virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Seadornavirus. XX RN [1] RP 1-3740 RX DOI; 10.1099/vir.0.81294-0. RX PUBMED; 16361432. RA Attoui H., Mohd Jaafar F., Belhouchet M., Tao S., Chen B., Liang G., RA Tesh R.B., de Micco P., de Lamballerie X.; RT "Liao ning virus, a new Chinese seadornavirus that replicates in RT transformed and embryonic mammalian cells"; RL J. Gen. Virol. 87(Pt 1):199-208(2006). XX RN [2] RP 1-3740 RA Attoui H., Mohd Jaafar F., De Micco P., De Lamballerie X.; RT ; RL Submitted (29-JUL-2004) to the INSDC. RL Virology, Faculte De Medecine, 27 Boulevard Jean Moulin, Marseille 13005, RL France XX DR MD5; 0210071f8c4bd7ecad3a33add708303c. XX FH Key Location/Qualifiers FH FT source 1..3740 FT /organism="Liao ning virus" FT /segment="1" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:246280" FT gene 15..3683 FT /gene="VP1" FT CDS 15..3683 FT /codon_start=1 FT /gene="VP1" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q2TPV0" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR026381" FT /db_xref="UniProtKB/TrEMBL:Q2TPV0" FT /protein_id="AAW29084.1" FT /translation="MDTMDYDGKFAEYMETEFLNYKAVVELQKSKLNKLFPGKRQILIV FT NDPTHEFDIHETGWLTDIYHRTPTQRLIWLGLLINRKLRPEDNLSLLTDPDLKALVEYS FT PAWYPFALRINQALNDGLNLNGNVEECSFDSRFINNIKFPRPENDFLGFKFIIEADTFV FT LLKDDLGIEKPDVIRCWLIDTIPEEVEISGETFKLREEMVRRVADEAPLYAFCDIVKYC FT LTEVDFTNIAIKQWLNYFVRKRDFFRFNGKDMVCSSSLIAHKRFEVALSHQRCSSKFSR FT LDEEGFECLTEGALYIMPDPIFRSHMLRSPFGDLNQHVFARTVGPSIVWSRSDIESTNF FT SLSIEPVPVDYSQNRFNYVDNENTKEVVESLRTMGMPKNARLLYNLQTAVINPTNMLKG FT KVNRMILAMCGYTGTHAATALVNQFKGTSDMGEAVTDSFAVRVADNMFDYINIGFAKDG FT IKDISATPDILFKGGTSSASSTNTFKSISGPVKYYSPFLTDEDVDDKTVFGTSGSKKLV FT LTRISHKLRSKNANIITNPENFLNFSADALDEVVNAGSRLVRGTRAKRIITPNYGSIYA FT NSLCTVLPAVRLLSNRPKNVLANTLEGIVGTTYTGALPHDVMAPFMCATTNDPSYFAAA FT FDFAQFDSSQYGRISDAHADGVRRFADKFTGDEVNDVKGRLDLMSLKSKFIIQSESYRR FT PLKYKSKGIVAEASGVKSGELTTQLRNTATNKGHTDEVLNRFNQLSRRKIRIKSENIIG FT DDKNIVFSLEDGRPLDSSTAKLLIEVARDVAQENHMELSAKRTVVGNCVTEHIKIFVAR FT GFIMQDVFLDSFASEKNSFRSMSYADRLNTIYDIFMTMLIRFAQAKPLMDLMINDMCLM FT DGLKSGRVTFIPTLGNLFAIGGPEMLVGAPEIRGMARFMHRFDSEYFSVMNDLYATLRD FT NSGGKKFIDDLTNSATDDLVNQFWINHFKRKNNYDVSLDTRIANKRQLQNLIPENCKVR FT LLKMVLDTVKEPVIQIMNDTMSLVNIIQRGKLTKYSKPKYHYVSWFIRSYNGVKYISPY FT LAADDGVKNVHTIVGLAERNTSIPESVEPINRLLRKYPHMHPSYIGGMDILSVLSEVDS FT GMWRDCLLALDFREDIIQPLLVLVDNVMFRYLHERNVTSTSLYDNTSRTYDVSDSNLNK FT LVHVAPSNSNKQSLGWRFEGMKVVLYMARYGHMVSVSHEPLVVDGDTVNSSYITAL" XX SQ Sequence 3740 BP; 1122 A; 671 C; 837 G; 1110 T; 0 other; gttatttttt gcttatggac acaatggatt acgatggcaa gttcgcagaa tatatggaaa 60 ctgaatttct aaattacaaa gctgttgttg aattacagaa atccaaacta aataaattat 120 ttccaggaaa acgacaaatc ttgattgtaa acgatccaac acatgagttc gacatccacg 180 aaacaggctg gttaactgac atctatcaca gaacaccaac gcagaggtta atatggcttg 240 gtctgctcat caatcgaaaa ctacgtcctg aggacaatct atcactgttg acagatccag 300 atcttaaagc tttggtcgag tactcaccag catggtatcc gtttgccttg cgaataaatc 360 aagctttgaa tgatggtcta aatctgaacg gtaatgttga ggagtgttct tttgacagta 420 ggttcatcaa taacatcaag tttcccagac ctgagaatga ctttctaggt ttcaagttta 480 taattgaagc cgacaccttt gtattattga aagacgatct tgggattgag aaacctgacg 540 ttataagatg ttggctgatt gatactatac cagaagaggt tgagattagt ggtgagacat 600 tcaagttaag ggaagagatg gtgaggcggg tcgcagacga ggctcccttg tatgcgtttt 660 gtgatatagt aaagtactgt cttactgagg ttgatttcac aaacattgca atcaagcagt 720 ggttgaatta cttcgtacga aagcgtgatt tcttccggtt caatggtaaa gatatggtct 780 gttccagttc gctcatagct cataaacggt tcgaggtggc ccttagtcat caacgatgta 840 gctcgaagtt ctcaaggtta gatgaagagg gatttgaatg tctcactgaa ggtgctctct 900 atatcatgcc ggatccaata tttcggtcac acatgttgag gtcaccattt ggtgatctta 960 atcagcacgt atttgctaga actgtgggtc ctagtatagt atggagccgt tctgacattg 1020 aatcaactaa cttcagtctg agtatagaac ctgttccagt cgactattcc caaaataggt 1080 ttaattatgt tgataacgaa aacacgaaag aagtcgttga gagcttacgc acaatgggaa 1140 tgcccaagaa cgctcgttta ttgtacaatc tacagaccgc cgtcatcaac ccaactaata 1200 tgttgaaggg taaggtcaac cgtatgatat tagctatgtg tggatacaca ggtactcatg 1260 ctgctactgc tttagtcaac cagtttaaag gtacttcgga catgggtgaa gctgttactg 1320 acagttttgc cgttagagtg gctgataata tgttcgatta cataaacata ggatttgcaa 1380 aggatggtat caaggacata tcagctactc cggacatact gttcaaagga ggaacttctt 1440 cagctagtag tactaacacg tttaagagta tatctggccc ggtaaagtat tactcaccct 1500 tcttgacgga tgaagacgtt gatgataaga cagtttttgg tacgagtggt tctaagaagt 1560 tggttctgac gaggatatca cacaagttac ggagtaagaa cgccaatata ataactaacc 1620 ctgagaattt tctaaacttc agtgctgacg cattggatga ggttgtgaat gcaggctctc 1680 gattagttag aggaactagg gctaaacgta taatcactcc taattatggt tcgatatatg 1740 ctaattctct gtgcaccgtt ctacccgctg ttcgactctt aagtaataga ccgaagaacg 1800 ttctagctaa tactctcgaa ggtatagttg gtactactta tactggtgcc ctaccacatg 1860 acgtcatggc cccattcatg tgcgctacta ctaatgaccc gagttacttc gctgcggctt 1920 ttgattttgc ccaattcgat tctagtcagt atggtcgtat ttcagacgcc cacgctgatg 1980 gagtacgacg tttcgccgat aaattcacag gtgacgaggt aaatgatgtt aaagggcggt 2040 tagaccttat gtcgttaaag agcaagttca taattcagtc cgagtcgtac cgtagaccac 2100 tgaagtataa gtctaaaggg atcgtggctg aagcttcagg ggtcaaatcg ggtgagttaa 2160 ctacccaatt acgtaacaca gctacgaata aaggtcatac agacgaagta ttgaatagat 2220 ttaatcaatt aagtagacgt aagataagaa tcaaatctga gaatataatc ggtgacgata 2280 agaatattgt attctcactc gaggatggtc gacctttaga ttcaagtact gctaaattat 2340 taattgaagt agctcgtgat gtagctcaag agaaccacat ggaattgtca gctaaaagga 2400 ctgtagttgg aaactgtgtc actgaacaca ttaagatatt tgttgctcga gggttcatta 2460 tgcaagacgt cttcctagat agtttcgctt cggaaaagaa tagcttcagg tcaatgtctt 2520 acgctgatcg tctcaatacg atttatgaca tattcatgac gatgttaatc cgcttcgcac 2580 aggccaaacc gttaatggac ttgatgatta atgacatgtg tttgatggat ggacttaagt 2640 caggtagggt tacattcatt ccaactctgg gaaatctgtt tgctataggt gggcctgaga 2700 tgttggttgg agctccagaa ataagaggca tggccaggtt tatgcataga tttgatagtg 2760 agtattttag cgtaatgaat gatctatatg ctacacttcg agataattct ggtggtaaga 2820 agttcattga tgatttgacc aattcagcca ctgatgatct ggtcaaccag ttctggataa 2880 accactttaa gaggaagaac aactatgatg ttagtcttga tactcgtata gctaataaac 2940 gtcaactgca gaatctaatc cccgagaatt gtaaggtacg actgcttaaa atggttctgg 3000 atacggttaa agaacctgta atacaaataa tgaacgatac tatgtctctg gttaacataa 3060 tacaaagagg taagttgact aagtattcca agccaaagta tcattatgta agttggttca 3120 tacggtcgta caatggtgtt aaatatatat caccttattt agccgctgac gatggagtta 3180 agaacgtaca taccatcgtg ggtttagctg aaaggaatac atcaataccg gaatctgtag 3240 aaccgattaa taggttgtta cgtaagtatc ctcatatgca tccgagctat attggtggca 3300 tggacattct tagtgttttg agtgaagtgg attcaggtat gtggagggat tgtctcttgg 3360 ctcttgactt tagagaagat atcattcaac cgttattggt actggttgac aacgtgatgt 3420 tcaggtatct gcatgaacgt aatgtcacat caacctctct gtatgataat acctcaagga 3480 cttatgacgt atctgactct aacttaaata agttggttca cgtagcaccg agtaatagta 3540 ataaacagtc tcttggatgg agatttgaag gaatgaaagt cgttttatac atggcaagat 3600 atggacatat ggttagtgtg tctcacgagc cactcgtggt tgacggagat actgtaaact 3660 cgtcttatat aacagctcta taaaattgca attttatcat tcgacaatgc tgtcgtgtgt 3720 cgtcgcaaga aagctctgac 3740 //