Dbfetch

Dbfetch

ID   AY682696; SV 1; linear; genomic RNA; STD; VRL; 674 BP.
XX
AC   AY682696;
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DT   03-AUG-2004 (Rel. 80, Created)
DT   22-JUN-2005 (Rel. 84, Last updated, Version 2)
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DE   Beet necrotic yellow vein virus isolate West Stow 13K transport protein
DE   gene, complete cds; and 15K transport protein gene, partial cds.
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KW   .
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OS   Beet necrotic yellow vein virus
OC   Viruses; Riboviria; Benyviridae; Benyvirus.
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RN   [1]
RP   1-674
RX   DOI; 10.1016/j.jviromet.2004.10.008.
RX   PUBMED; 15664049.
RA   Ratti C., Clover G.R., Autonell C.R., Harju V.A., Henry C.M.;
RT   "A multiplex RT-PCR assay capable of distinguishing beet necrotic yellow
RT   vein virus types A and B";
RL   J. Virol. Methods 124(1-2):41-47(2005).
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RN   [2]
RP   1-674
RA   Ratti C., Clover G.R.G.;
RT   ;
RL   Submitted (09-JUL-2004) to the INSDC.
RL   Department of Agroenvironmental Sciences and Technology, University of
RL   Bologna, Viale Fanin, 44, Bologna, Bo 40126, Italy
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DR   MD5; 468e2e9fa3cd82633eb4b479abd2b2a1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..674
FT                   /organism="Beet necrotic yellow vein virus"
FT                   /map="TGB region"
FT                   /segment="RNA2"
FT                   /isolate="West Stow"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /db_xref="taxon:31721"
FT   CDS             2..358
FT                   /codon_start=1
FT                   /product="13K transport protein"
FT                   /db_xref="GOA:Q6B4L4"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q6B4L4"
FT                   /protein_id="AAT81573.1"
FT                   /translation="MSREITARPNKNVPIVVGVCVVAFFVLLAFMQQKHKTHSGGDYGV
FT                   PTFSNGGKYRDGTRSADFNSNNHRAYGCGGSGGSVSSRVGQQLVVLAIVSVVIVSLLQR
FT                   LRSPPEHICNGACG"
FT   CDS             342..>674
FT                   /codon_start=1
FT                   /product="15K transport protein"
FT                   /db_xref="GOA:Q6B4K1"
FT                   /db_xref="InterPro:IPR010470"
FT                   /db_xref="UniProtKB/TrEMBL:Q6B4K1"
FT                   /protein_id="AAT81574.1"
FT                   /translation="MVLVVKVDLSNIVLYIVAGCVVVSMLYSPFFSNDVKASSYAGAVF
FT                   KGSGCIMDRNSFAQFGGCDIPKHVAESITKVATKEHDADIMVKRGDVTVRVVTLTETIF
FT                   IILSRLF"
XX
SQ   Sequence 674 BP; 173 A; 109 C; 172 G; 220 T; 0 other;
     aatgtctagg gaaataaccg ctcgacccaa taagaatgtg cctattgttg ttggtgtttg        60
     tgttgtggct ttctttgtat tgctggcgtt catgcagcaa aaacataaga cacattctgg       120
     gggcgattac ggagttccaa cattttctaa cggtggtaaa tatagagacg gtacaaggtc       180
     agctgatttt aatagtaata atcatcgtgc ttacgggtgc ggtgggtctg ggggtagcgt       240
     tagtagtcga gtcgggcagc aacttgttgt gttagctatt gtgtctgtgg taatagtatc       300
     actattacaa cgattaagat ctccaccaga acatatttgt aatggtgctt gtggttaaag       360
     tagatttatc caatattgtg ttgtatatag ttgccggttg tgttgttgtt agcatgttgt       420
     actcaccatt tttcagcaac gatgttaaag cgtccagcta tgcgggagca gtttttaaag       480
     ggagtggctg tatcatggac aggaattcgt ttgctcaatt tgggggttgc gatattccaa       540
     agcatgtagc cgagtccatc actaaggttg ctaccaaaga gcacgatgct gatataatgg       600
     taaaaagagg tgacgtgacc gttcgtgttg tgactctcac cgaaactatt ttcataatat       660
     tatctagatt gttt                                                         674
//