ID AY654892; SV 1; linear; genomic DNA; STD; VRL; 8186 BP. XX AC AY654892; XX DT 19-JUL-2004 (Rel. 80, Created) DT 22-JAN-2005 (Rel. 82, Last updated, Version 2) XX DE Citrus psorosis virus segment RNA1, complete sequence. XX KW . XX OS Citrus psorosis virus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Milneviricetes; OC Serpentovirales; Aspiviridae; Ophiovirus. XX RN [1] RP 1-8186 RX DOI; 10.1007/s00705-004-0403-y. RX PUBMED; 15449144. RA Martin S., Lopez C., Garcia M.L., Naum-Ongania G., Grau O., Flores R., RA Moreno P., Guerri J.; RT "The complete nucleotide sequence of a Spanish isolate of Citrus psorosis RT virus: comparative analysis with other ophioviruses"; RL Arch. Virol. 150(1):167-176(2005). XX RN [2] RP 1-8186 RA Martin S., Lopez C., Garcia M.L., Naum-Ongania G., Grau O., Flores R., RA Moreno P., Guerri J.; RT ; RL Submitted (16-JUN-2004) to the INSDC. RL Proteccion Vegetal y Biotecnologia, Instituto Valenciano de Investigaciones RL Agrarias (IVIA), Ctra. Naquera-Moncada Km 4,5, Moncada, Valencia 46113, RL Spain XX DR MD5; cb484854b73a5bedeba34ea7c4eee6b7. XX FH Key Location/Qualifiers FH FT source 1..8186 FT /organism="Citrus psorosis virus" FT /segment="RNA1" FT /strain="P-121" FT /mol_type="genomic DNA" FT /db_xref="taxon:73561" FT gene complement(170..7420) FT /gene="RdRp" FT CDS complement(170..7420) FT /codon_start=1 FT /gene="RdRp" FT /product="280 kDa protein" FT /note="putative RdRp" FT /db_xref="GOA:Q6DN67" FT /db_xref="InterPro:IPR014023" FT /db_xref="UniProtKB/Swiss-Prot:Q6DN67" FT /protein_id="AAT72907.1" FT /translation="MEWSDEKASSKITLEDEIEIITSDIVASEDTIIELAKKEEEAKKA FT LEARKGYAEEYIKLIEEMKNYPSAYSILSGKKEEYIMLRTAQDHEKSLEPKKEKIKYTS FT MIKYWIKWDHLAYIGTYVDRPALISRLDSPYKTITNETIEDFLYREDYPEKFGVRAKID FT LFRLREFVGQEKWSSKIKQGNQKETEIWVSYLKETKNKSKKLETLLEYGKNMADEELLS FT NREKITGKMQKTYKEAWKIEPSEDTQTSLWFINLLEIIIFKIKMTYSQLLNRIESVSES FT MEREGRKIITKVNLDGSSTTTLVVNNAQTNEKIKTEIFISNTFHAIKYNGVILIGDNTL FT LKFVLSTEENELNMNIVKDYNFMKGEKSDNFFIDFMMRLKKVPQPLRTLIAATYETVCL FT MMADHKCSSSTLPIIDAVIELMKLDKKIGEELLSICMTSDGVXCIKASTLAKMNTYAEV FT NELEGLRKYIQRTNRNHDVSKESIERLRCMMRMKIITNYIKKFGVVPQMTCNSGLLEQE FT LNLMASGGSYNNHIIRNTSHYKDVKLGKMLQPGNEVNISSRVIDKACTKDEYDFSGNSV FT KELVYYITKNDLVDLIDEIEIGKVYEENKNQDRETKCFFRKDKELARMQKYKICRLIEK FT EKELKTEGRFYGVASFKLKIYISIIMEMIKRAMKLIPGQMMTMTEDERRTVMHRMSVML FT EEKDAYTLFLDYSGHNTSQRPENNLFILEEIADMYGFEENSIERKRLTQVVYLFNELEI FT LYEHLFSDMVVWSRRQKGAIEGWFGPLWGIQSQLMLDDMMVSMGIEKYIGTTYSDDSCG FT VFIKKNLDQEELNRMIEYIQSYSLKMGLLVKLSQTQITNGRCSMLKNHYYFDKPIDTSY FT KRIMSISPNSDILWGNDSERVSVIDSAYTSSVLRADDNYIQTVIRNFRIMIEIEKDVIR FT WALFYDLELDPRFINLRGSLSTLGKIYRKIVDEASELRELKEIENSMPNEDEIVTQFFL FT FHIKNRKLLKLTLALMYLPSTCYGHALTSMVDSFISGYSYSNVKRLSYVESLFNDKKDK FT VFIYSLVRLSENAISYVGEPFPMTGGRYDTKTILKDELKQLLKHKVQNNELKEMLNSFS FT EDKEHLFKAVLVHTFEKCFSHRIASKFYECSIFNYINELYAKINNSTTMSYLVGKKKMN FT KLWNKAWKVNHKIEYKFQGNIINEIKSDPSYFGLIMGRNKVDKRIVQNNEMKYFRMNFL FT NIEELPIIGKMSADNLTGQLRCIIKPMRVYSKIKGLRLPGPVRTAINITKFDRDLEIEG FT MFQNKLIFMAYELVRYVKWMIFDMEKYNKQDNTQAIKSLRKLTDITIGTFSNAKINDIE FT EAVVCPKGGRYFHRALSGGFNPKTGDLSSNMLSSRVEVTGLDRLTNETGGVDNNINLQL FT VITALKVQLALIGYTNNETISIGLDSDVKYFARDVTFMLDQIKSEKELECDLGLSHRFD FT SMTLDKLNEKRTLYHNFSHFVSVNEDIAGKFIDHKTILPSSKIEEISSFQSLNKYMQDM FT EILVPTQIPENIMKELVPNLNSYGSIDRYLEEFYKFYKGLNIIGNESFTKAVVRSIINK FT ELFDRKNIEGKDWLKEIELTGFSYGYRKSLLKIFIVSCCMVFRVEEPTGNTLKITIFED FT KTKINCLNNIKRIKNSEAHLHINDKRISDLINMAFPLVGYQLKDVFVAVREIMEEHNGK FT IIDGTKVIQYFNVENTSYASQLEEENCGRISYSNIVLKPSDLSDEKQFIASIKAFEMIA FT TLNCKPQHVSSPTKSDVYPSAKALLDYLINSNVVSVDDKIADIFAGRGDFHLIMDNMGI FT THTSISRNDGYNLINRIPGMKEIKANIDMTYSENYGQYLDHDVFILDISHFTGDPNNII FT RMIDDILAVGKKVIIRWNSIAPMCTKLLYNFVIKRHHKIDILMPTIESPGYIYLLFNGG FT FYEPKEILEGENSKKEKKTYNENIITSNMVLELNRIRKTSILNCSGIKVSDHTQELISD FT DKLISILEENESKSYISNDIEMRIEEGEKLEELLMVLNPSDKLLGLENIIRQEIRVEEA FT ERGAKSLKYFKRLIAETKPISGMKKIKLDKNFLKWMIRENKMKLENDKLIIVEGVKNGH FT CKEIKKTIDLIINDKNTSKMNQEAWTCVKAGINQFISVEGEETECDMKVILMMIQGSTE FT YKSRFFSYDRILRLAHMASDAIKTGTMAESILILSGLRSGVLSSLKKNKGKALRYDCLN FT IKLIMNRMLVLSEERNIIIQSSNLRLSEIVKDILLFRKIGQGDKRVKKSIRGKFKRGEK FT NNKHIISWFDEDEELELKCTELLEQREIEEEILKLREFDRLEDYLESQGINELFSAITD FT ELSKEGVRMEMTEEHLAQGIDEQANILSEGFKSFLGVQDEEVEKNRNMTVEEMRKLVDD FT DDDCEYLSDEE" FT gene complement(7529..8149) FT /gene="24K" FT CDS complement(7529..8149) FT /codon_start=1 FT /gene="24K" FT /product="24 kDa protein" FT /note="unknown function" FT /db_xref="UniProtKB/Swiss-Prot:Q6DN66" FT /protein_id="AAT72908.1" FT /translation="MAEYIEVRVENLHKWGLEINMERIEKLSKRLKSIVDEDCIMKTSR FT IIGIWMFMPEIVQESLKDSPLMTQKAWIIPHEKTYKTIYGKDGIQMAVTQNEEDLFKDS FT EFFMISRCDSVMLTKNNKTIILNKELLNCNMSEDMLFNMLSCQEQDITEELMKKMKTII FT SSNPKERLEDKTEEVFWNSTRILNWIQHNDNSRSNSSDNSFRE" XX SQ Sequence 8186 BP; 2140 A; 1651 C; 1041 G; 3350 T; 4 other; ggtatcctaa ttaggattat cgtcttgtta gacaattgat agcgcaatgc tttgaaagtg 60 ttccacaatc gtattaacca tttttattat ctaaaatcta atatattaaa atactcttac 120 tgatattatc tgcaaacaaa gtatttaact ctatccttga tgatatttct tactcttcat 180 cagacagata ttcgcagtca tcatcatcat caaccaattt tctcatttct tccactgtca 240 tatttctgtt tttctccact tcttcatctt gaacccccag gaaacttttg aagccttcag 300 acaatatgtt tgcttgttca tcaattccct gagcaagatg ttcttctgtc atttccatcc 360 tgacaccttc cttagataat tcatctgtta ttgcagagaa cagttcattt ataccttgac 420 tttccaaata atcttctagt ctgtcgaact ctcgcaattt taatatttcc tcttctattt 480 ctctttgctc caggagttca gtacacttta actctaattc ttcatcctca tcaaaccatg 540 agattatatg cttgttattt ttttcacctc ttttgaattt tcctctgatt gactttttta 600 ctcttttatc cccttgtcct atttttctga atagaagaat atcttttact atctcagaca 660 atctgaggtt gcttgattgt attatgatgt tcctttcttc tgataacacc agcatcctgt 720 tcattatcaa tttaatgttc aggcagtcat atcttaatgc ttttcccttg tttttcttta 780 atgatgatag gacacctgat cttagtccac ttaatatcaa tatgctttca gccattgttc 840 ctgtctttat tgcatctgat gccatgtgtg ctagtctgag tatcctatca tatgaaaaaa 900 atcttgactt atactctgtg cttccctgta tcatcattaa tattactttc atatcacatt 960 cagtttcttc cccctcaaca gatataaatt gattaattcc tgccttgacg caagtccatg 1020 cttcctgatt cattttgcta gtgttcttgt cattaattat cagatctatg gttttcttga 1080 tttccttgca atgaccattc tttacacctt ctactatgat caatttatca ttttctaatt 1140 tcattttatt ttctcttatc atccacttta agaaattctt gtccaatttt atcttcttca 1200 ttcctgagat tggctttgtt tctgctatta atcttttgaa atacttcaaa ctttttgctc 1260 ctctctcagc ttcctctact cttatttctt gtcttatgat gttttctaag cccaataact 1320 tatcactcgg atttaacacc atgagtaatt cctccaactt ttctccttct tcaatcctca 1380 tttctatatc atttgatata tatgatttgc tctcattttc ctccaaaata cttatcaatt 1440 tatcatcact tatcagctcc tgtgtatgat cagacacttt gattcctgag caattcaaaa 1500 ttgatgtctt tcttattcta tttagctcaa gcaccatgtt tgatgttatg atattctcat 1560 tatatgtttt cttttctttc ttgctgttct ccccttccaa aatttccttt ggttcataga 1620 aaccaccatt aaataacaaa tatatataac caggtgattc tattgtcggc atcaaaatat 1680 ctattttatg gtgtcttttt atcacaaaat tgtataatag ttttgtgcac atgggggcta 1740 tggagttcca tcttatgata actttttttc ccacagccaa tatatcatcg atcatcctta 1800 ttatgttatt tgggtctcca gtgaagtgtg atatatcaag gataaaaacg tcatgatcca 1860 agtattgtcc ataattttca ctataggtca tgtctatgtt agctttaatt tctttcatgc 1920 caggaatacg gttaattaaa ttgtaaccat catttcttga tatagatgta tgagttattc 1980 ccatgttgtc cattattaaa tgaaaatctc ctcttcctgc aaagatgtcc gcaattttat 2040 catccacact gaccacattg ctatttatta ggtaatctag gagtgccttt gcacttgggt 2100 aaacatctga ctttgtaggt gatgaaacat gttgtggttt acaattcagt gttgcaatca 2160 tttcaaaagc ttttatagac gctataaatt gtttttcatc acttaagtca cttggtttta 2220 acacaatatt agagtaagaa atgcgcccac aattttcttc ttctaattga ctcgcatagg 2280 atgtgttctc aacattgaaa tattgtatta cctttgttcc atcgattatt tttccattgt 2340 gctcttccat tatttccctc accgccacaa atacatcttt caattggtaa ccaacaagtg 2400 gaaatgccat gtttatcaaa tcacttattc ttttgtcatt tatatgtaag tgtgcttctg 2460 aattttttat tctttttata ttgtttaaac aattaatttt tgtcttgtcc tcaaatattg 2520 tgattttcaa tgtattccct gtgggttctt caactctaaa taccatacaa catgatacta 2580 taaatatctt taataatgat ttcctatagc cgtaagaaaa cccagttaat tctatttctt 2640 ttagccaatc ttttccttca atgttttttc tatcaaacaa ttccttattt ataatggatc 2700 tcaccacggc ttttgtaaaa ctttcattcc caattatgtt cagtccttta taaaatttat 2760 aaaattcttc tagatatctg tctattgaac catatgagtt caaattcggg actagttcct 2820 tcattatgtt ttctggtatt tgtgtgggaa ccaaaatctc catatcttgc atatacttgt 2880 tcagtgattg gaatgagctt atctcttcta ttttagatga tggcaatatt gttttgtgat 2940 ctatgaactt gcctgctatg tcttcattaa ctgacacaaa gtgtgaaaaa ttgtgataca 3000 acgtcctttt ttcattcaat ttgtcaagtg tcattgagtc aaatctatgt gacaatccta 3060 aatcacattc tagttctttt tcgctcttga tttgatcaag catgaatgtc acatctctgg 3120 caaaatattt tacatcacta tctaatccta tcgaaattgt ttcattatta gtgtacccta 3180 ttaaagctaa ctgcaccttc aatgctgtta ttactaattg taagttaata ttgttatcca 3240 cccctcctgt ttcgtttgtt agtctgtcaa gccccgtcac ttccactctt gaacttaaca 3300 tgttggatga taagtctcct gtttttgggt tgaagcctcc tgataacgct ctgtgaaaat 3360 accttcctcc ctttgggcag acgacggctt cttcgatatc attaattttt gcattagaaa 3420 atgttcctat tgttatgtca gtcaatttcc ttaaggattt tatagcttga gtattatctt 3480 gtttgttata tttttccata tcaaatatca tccattttac gtatcttaca agttcatatg 3540 ccataaaaat tagtttgttt tgaaacattc cttctatttc taaatctctg tcaaattttg 3600 ttatgtttat cgcagtcctg acaggcccag gcaatcttag cccttttatc tttgagtaaa 3660 ctctcatcgg tttaattatg catctcaatt gtccggttaa attatcagca ctcatctttc 3720 ctattatggg aagctcctca atgttcagaa aattcattct gaagtacttc atttcattgt 3780 tctgtacaat ccttttatca actttatttc tccccattat taatccaaaa tagcttggat 3840 cgctttttat ttcattaatt atgtttcctt ggaatttata ctctattttg tggttaactt 3900 tccatgcctt attccacaat ttattcattt tcttttttcc tacaaggtag ctcattgttg 3960 ttgagttatt aatttttgcg taaagttcat ttatgtaatt aaatattgag cattcataaa 4020 acttagaagc aatcctgtgt gaaaagcatt tctcaaacgt atgaactaag acagctttaa 4080 acaggtgttc tttgtcttca gaaaatgagt ttaacatttc tttcaattca ttattttgaa 4140 ctttatgttt taggagttgt tttaactcgt ccttcaaaat tgtcttagtg tcatatcttc 4200 ctccagtcat tgggaatggt tctcccacat aactaattgc attttcactc aatctcacta 4260 gtgaatatat aaacactttg tcttttttgt cattgaatag actctcaaca tatgacaatc 4320 ttttcacatt agagtatgaa taacccgata taaaactatc aaccatagaa gtcaaagcat 4380 gcccgtagca cgttgaaggt aaatacatca gagccagtgt caacttcaac agcttcctgt 4440 tttttatgtg aaacagaaag aattgagtca ctatttcatc ctcatttggc attgagtttt 4500 ctatttcttt tagttccctc aattcagaag cttcatccac gatttttcta tatatttttc 4560 ccaatgtgct aagggaacct cttaaattaa taaacctcgg gtccaattcc aagtcataga 4620 ataatgccca ccggatgaca tctttttcaa tttctatcat tatcctaaag ttccttatca 4680 cagtttgtat ataattgtca tctgccctca atacactaga agtatatgca ctgtctatta 4740 cagatactct ctcagaatca tttccccaca aaatgtcaga attaggtgaa atggacatta 4800 tccttttgta tgaggtgtct attggtttgt cgaaataata atgatttttt aacatggaac 4860 atcttccatt agttatttgt gtttgtgata atttaactaa caaccccatt tttaatgagt 4920 aactttgaat atactctatc atccgattta gttcttcttg gtccagattc ttttttatga 4980 ataccccaca tgagtcatca gagtatgtgg ttcctatata tttttctatt cccatcgaca 5040 ccatcatgtc atctaacatt aattgcgatt gtatgcccca caatggccca aaccatccct 5100 ctattgctcc cttttgcctc cttgaccata ccaccatgtc tgagaataag tgctcataca 5160 agatttcgag ttcattgaat aaataaacaa cttgagtaag tcttttcctc tctattgagt 5220 tttcttcaaa accatacata tctgctattt cttccagtat gaacaagtta ttctcaggcc 5280 tttgcgatgt attatgacct gagtagtcta agaagagtgt gtatgcatct ttctcttcta 5340 gcattacaga catcctatgc atcactgtcc ttctctcatc ttctgtcatt gtcatcattt 5400 gaccaggtat caatttcatt gcccttttta tcatttccat aatgatggaa atgtaaattt 5460 taagcttgaa actagcaact ccataaaatc ttccttctgt cttcaattct ttttcctttt 5520 ctattaatcg acatatttta tatttctgca ttcttgctag ctctttgtct tttctaaaaa 5580 aacactttgt ttcacgatct tggtttttat tctcttcata tactttccct atctcaattt 5640 catctatcaa gtccactaag tcattttttg ttatataata aacaagttct tttactgaat 5700 ttcctgaaaa atcatattca tcttttgtac aagctttgtc tatgactctg gatgatatgt 5760 taacttcgtt tcctggttgc aacatctttc ccaatttcac atctttgtaa tgtgaagtgt 5820 tccttatgat gtggttatta taacttcccc cagatgccat taaattcagt tcctgttcta 5880 gcaaccctga attacatgtc atttgcggta ctacaccaaa ctttttaata tagtttgtta 5940 ttatcttcat tctcatcata catcttaacc tctctattga ttcctttgac acatcatgat 6000 tcctgtttgt tctttggata tattttctta gaccctctag ctcattgacc tcagcatatg 6060 tgttcatctt ggctaatgtt gaggctttta tacaagycac tccgtcagat gtcatacata 6120 tagataaaag ttcttctcct atttttttat ccaatttcat taattctata acagcgtcaa 6180 ttataggaag agttgatgat gagcatttat ggtcagccat cattaagcaa acagtctcat 6240 aggttgccgc aattaatgtt cttaatggtt gagggacttt ctttaatctc atcatgaaat 6300 ctatgaagaa attatcgctt ttttcgccct tcatgaaatt atagtccttg actatattca 6360 tgttcaattc attttcttca gttgacaata caaattttag tagtgtatta tctcctatca 6420 atatgacacc attgtatttg atagcatgra aggtgttgct tatgaaaatc tcagttttta 6480 ttttytcgtt cgtttgtgca ttattcacaa ccaacgtggt tgtgctgcta ccgtccagat 6540 tcactttggt tattattttt cttccttctc tctccattga ttcactcaca ctttcaatcc 6600 tgttcagcag ctgagaataa gtcatcttta tcttaaatat tattatttcc aacaaattaa 6660 taaaccataa tgatgtttgt gtatcttctg atggttcaat tttccaagcc tctttatagg 6720 tcttttgcat ctttcccgtt attttctctc tattagataa cagctcttca tcagccatat 6780 tttttccata ttctaataat gtttctaatt tcttgctttt atttttcgtt tctttcagat 6840 atgacaccca gatttccgtt tctttttgat tcccttgttt tatcttcgag ctccacttct 6900 cttgtccaac aaattccctc aatctaaaca gatcaatttt ggccctcaca ccaaattttt 6960 caggataatc ttctctgtac aggaaatctt ctatcgtctc attggttatt gttttgtatg 7020 gtgaatccaa ccttgatatt agtgctggcc tatcaacata tgttccaatg tacgctaaat 7080 gatcccactt aatccagtat ttgatcatgc tagtgtattt tattttttct ttttttggtt 7140 ctaagctctt ctcgtgatct tgagcagtgc gcagcattat atattcttct ttctttcctg 7200 ataagatact atatgcagag gggtagttct tcatttcctc tatcaatttt atgtattctt 7260 ctgcataacc cttccttgct tccagagctt tttttgcttc ttcttctttt tttgctagtt 7320 ctattatagt gtcttctgaa gcaacaatat cacttgttat tatctctatc tcatcttcta 7380 atgtaatctt acttgatgcc ttttcatcgc tccaytccat gtttatctct tccgtatcaa 7440 actttagctg tttttgttgg gtcacacttt tttgttttaa ttaaagcgat aatcactcaa 7500 ttgatgtcaa aatgatctag attgcttttc attcacgaaa agaattgtct gaagaattgg 7560 atcttgaatt atcattgtgc tgaatccaat ttaatattct tgttgagttc caaaatactt 7620 cttctgtttt gtcttctagc ctttcttttg gatttgaact tattattgtt ttcatctttt 7680 tcattagctc ctcagttata tcttgttcct ggcaagataa catgttaaac aacatatcct 7740 cagacatgtt acagtttagt agctctttat ttaagataat tgttttgttg ttttttgtta 7800 acatcacact gtcacaccta gatatcatga agaattctga gtccttgaat agatcttctt 7860 cattttgtgt taccgccatc tgtattccgt cttttccata tattgtttta tatgtcttct 7920 catgtggaat tatccatgct ttttgtgtca ttaaaggaga atctttcagt gattcttgaa 7980 cgatttcagg cataaacatc caaattccaa ttattcttga tgttttcatt atgcaatctt 8040 catccacaat acttttaagt cttttggaca atttctcaat tcgttccata tttatttcca 8100 atccccattt gtgtaagttt tcgactctca cttctatgta ttcagccatg tttcagctag 8160 atcacttttt cttgaaaaaa agtatc 8186 //