ID   AY629310; SV 1; linear; genomic RNA; STD; VRL; 1143 BP.
XX
AC   AY629310;
XX
DT   08-JUN-2004 (Rel. 80, Created)
DT   19-JUL-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus isolate UT6.2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1143
RA   Gemechu A.L., Chiemsombat P., See-Tou W., Larprom A.;
RT   "Cloning and sequence analysis of coat protein gene of SCMV in Thailand";
RL   Thesis (2004), Kasetsart University, Kampeang Saen Campus, Nakhom, Pathom,
RL   Thailand
XX
RN   [2]
RP   1-1143
RA   Gemechu A.L., Chiemsombat P., Attathom S., Larprom A., See Tou W.,
RA   Rienwarakorn K.;
RT   ;
RL   Submitted (19-MAY-2004) to the INSDC.
RL   Plant Pathology, Kasetsart University, Malai Man Rd., Kamphaeng Saen,
RL   Nakorn Pathom 73140, Thailand
XX
DR   MD5; 531bcb06f16672663fe4095a1ecbd2f9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1143
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="sugarcane"
FT                   /isolate="UT6.2"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand:U-Thong district, Supanburi province"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..1143
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="partial NIb polymerase and complete coat protein"
FT                   /db_xref="GOA:Q6IT39"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q6IT39"
FT                   /protein_id="AAT40421.1"
FT                   /translation="FYAWLLEMQPFANLAKEGMAPYIAETALRNLYLGTGIKEEEIEKY
FT                   FRQFVKDLPGYVEDYNEEVIHQSGQADAGRQGGSGAQGGTPPAGSGGTGPGTQGNGGQT
FT                   GFQGSGGQQGSGGGTGQVAAGNNGGGQTGGSNGTAGQRDKDVDAGSAGKISVPKLKAMS
FT                   KKMRLPKAKGKDVLHLDFLLTYKPQQQDISNTRATKEEFDRWYDAIKKEYEIDDSQMTV
FT                   VMSGLMFWCIENGCSPNINGNWTMMDGDEQRVFPLKPVIENASPTFRQVMHHFSDAAEA
FT                   YIEYRNSTERYMPRYGLQRNLTDYSLARYAFDFYEMTSRTPARAKEAHMQMKAAAVRGS
FT                   NTRLFGLDGNVGETQENTERHTAGDVSRNMHSLLGVQQHH"
XX
SQ   Sequence 1143 BP; 366 A; 238 C; 303 G; 236 T; 0 other;
     ttttatgcgt ggcttcttga aatgcaaccc ttcgcgaacc tggcaaaaga aggcatggcg        60
     ccatacatag cagaaacagc actccgcaac ctctaccttg gaacaggcat caaagaagaa       120
     gaaattgaaa aatattttag acagtttgtc aaggatcttc ctggatacgt agaagattac       180
     aatgaagaag ttattcatca atctggtcaa gctgacgcag ggagacaggg tggtagcggc       240
     gctcaaggag gcacaccacc agcaggaagt ggaggcactg gacctggcac tcaaggcaat       300
     gggggtcaga cgggatttca aggaagtggt ggtcaacaag ggtccggtgg gggcactggt       360
     caagtagcag ctggaaacaa cggcggaggt cagacaggag gctctaatgg gacagctggt       420
     cagagagata aggacgttga cgcaggctcg gctggaaaga tatccgtacc aaagcttaaa       480
     gccatgtcaa agaaaatgcg cttgccaaag gcaaaaggaa aagacgtctt gcatttggac       540
     tttttgttga catacaaacc acaacagcag gacatatcga acacaagagc aactaaggaa       600
     gagtttgata gatggtacga cgccataaag aaggagtatg agatcgatga ttcacaaatg       660
     acagtcgtca tgagtggtct gatgttctgg tgcatcgaaa atggttgctc accaaacata       720
     aacggaaatt ggacgatgat ggatggggat gaacaaagag ttttcccact aaaaccagtt       780
     attgaaaacg catctccaac ttttcgacaa gttatgcatc atttcagtga tgcagctgaa       840
     gcgtatatag aatacagaaa ttctactgag cgatacatgc caagatacgg acttcagcga       900
     aatctcaccg actatagctt agcgcggtat gcttttgatt tctatgaaat gacttcacgc       960
     acaccagcta gagctaagga agcccacatg cagatgaaag ccgcagcagt tcgtggctca      1020
     aacacacgac tgttcggctt ggacggaaat gtcggcgaga ctcaggagaa tacagagaga      1080
     cacacagctg gcgacgttag tcgcaatatg cactctctgt tgggagtgca gcagcaccac      1140
     tag                                                                    1143
//