ID   AY615211; SV 1; linear; genomic RNA; STD; VRL; 1781 BP.
XX
AC   AY615211;
XX
DT   28-JUN-2004 (Rel. 80, Created)
DT   28-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Gremmeniella abietina RNA virus MS2 unnamed segment, complete sequence.
XX
KW   .
XX
OS   Gremmeniella abietina RNA virus MS2
OC   Viruses; Riboviria; Partitiviridae; Gammapartitivirus.
XX
RN   [1]
RP   1-1781
RX   DOI; 10.1016/j.virusres.2004.12.005.
RX   PUBMED; 15845253.
RA   Tuomivirta T.T., Hantula J.;
RT   "Three unrelated viruses occur in a single isolate of Gremmeniella abietina
RT   var. abietina type A";
RL   Virus Res. 110(1-2):31-39(2005).
XX
RN   [2]
RP   1-1781
RA   Tuomivirta T.T., Hantula J.;
RT   ;
RL   Submitted (30-APR-2004) to the INSDC.
RL   Forest Pathology, Finnish Forest Reseach Institute, Vantaa Research Center,
RL   Jokiniemenkuja 1, P.O.B. 18, Vantaa FIN-010301, Finland
XX
DR   MD5; 44b6f8238f44b7c34378cd00d6051817.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1781
FT                   /organism="Gremmeniella abietina RNA virus MS2"
FT                   /host="Gremmeniella abietina type A"
FT                   /isolate="SurS4"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /note="unnamed segment"
FT                   /db_xref="taxon:279540"
FT   CDS             63..1682
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:Q6GYB9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6GYB9"
FT                   /protein_id="AAT48886.1"
FT                   /translation="MSEVDNTDPTLQDVAFVESSGLDTTHLRSSEKTAGASYSVISSNF
FT                   NSPGLTEIARYGGYSVYSGNQNTDPWVRATLKNFSRETYERIYGFTRQPEGVMGMYSSL
FT                   LKFSDGKCKFDRLNRVQRKAMIGAIAKAKKAFRLPYKSEPLDWHQVGAHFRRDTAAGVS
FT                   FMGKKKGEVMEEIYHEARWLGHRLKQNGKARFDPRQMRFPPALAGQRGGMSERDAPKTR
FT                   LVWVYPAEMLVVEGQYAPVMYRAFMDQPDTPMLNGASSQRLYTEWLVGRREGETLYGLD
FT                   FSSFDTKVPSWLIRVAFDILRQNIEWETWQGEKVSKRDRQKWRNVWDGMVWYFINTPIL
FT                   NPDGRMFRKRRGVPSGSWWTQMVDSVVNYILVEYLTECQGVEARGLRVLGDDSAFRSPV
FT                   EFSLEQAQSDCEPTGMILKPEKCEKTEDPSDFKLLGTTYRECHPHRDTNEWFKLALYPE
FT                   SRVGNLEVSLSRLVGLWIGGAMWDKEFCSYMDYFQSSYPCPTEGWFSKDQRRWLSIVYG
FT                   GKAPRGWGDKKSLFWRSIFYTF"
XX
SQ   Sequence 1781 BP; 429 A; 408 C; 476 G; 468 T; 0 other;
     cgcaaaatat acgatatttt tattcacgtt tgcgtgattt tcgcctcctt catttcagtg        60
     tcatgtccga agttgacaac actgatccaa ctttacaaga tgtagccttt gttgagtcca       120
     gtggtctgga cacaacacac cttcggtcat cggagaaaac cgctggtgca agctactctg       180
     tgataagtag caacttcaac tctcctggtc taactgaaat cgcgcgctac ggcggttaca       240
     gtgtatactc agggaatcag aacactgatc cttgggttag ggccacactc aaaaactttt       300
     ctcgtgaaac ttacgagcga atctatggat tcaccagaca gcccgaaggt gtcatgggaa       360
     tgtatagctc actgttaaag ttcagtgatg gcaagtgcaa gtttgatcgt ctcaaccgtg       420
     ttcaacggaa ggcgatgatt ggcgcaattg cgaaagcaaa gaaggcgttt cgtcttccat       480
     ataaatccga gcctttggat tggcaccaag taggtgctca cttccgccgt gatacggcgg       540
     caggtgtttc tttcatgggg aagaagaaag gtgaggtgat ggaagagatt taccatgaag       600
     ccaggtggtt aggtcaccgg ctcaaacaaa atggcaaagc tcgtttcgac ccgaggcaga       660
     tgcggttccc gcctgctttg gccggccaac gtggcggcat gtccgaaagg gacgcgccga       720
     agacacgttt ggtgtgggtt tatccggcag agatgctggt agttgaaggt cagtacgctc       780
     ctgtgatgta cagggcgttc atggaccaac cagatactcc gatgctcaac ggagccagct       840
     cacagcgctt gtataccgag tggctggttg gcagacgcga aggcgagact ctctatggtc       900
     tcgacttttc gagcttcgac accaaggtac cttcttggtt aatccgcgtg gcatttgata       960
     ttcttcgtca gaatattgag tgggaaacgt ggcaaggaga gaaggtgtct aaacgtgatc      1020
     gccaaaagtg gcgtaacgtt tgggatggta tggtttggta cttcatcaac acgcctatct      1080
     taaatcctga cggccgcatg tttcgcaaga gacgtggcgt gccttctggg tcgtggtgga      1140
     cccagatggt cgactcagtt gtgaattaca tcttagtcga ataccttaca gagtgtcagg      1200
     gtgtcgaagc acgtggatta cgcgtgcttg gcgacgacag tgctttccgt tcaccggtcg      1260
     agttcagcct cgaacaagca caatctgact gtgagccaac gggtatgata ctcaagcctg      1320
     agaagtgcga gaaaacagag gatccctctg acttcaaatt gcttggtacg acataccgtg      1380
     agtgccatcc tcatcgtgat acgaatgagt ggttcaagct cgctctgtac cctgagtctc      1440
     gagttggtaa tctcgaggtc tcattgtcaa ggctcgtcgg cctatggatc ggcggggcca      1500
     tgtgggataa ggagttctgc tcctacatgg attactttca gtcttcctat ccgtgtccaa      1560
     cggaaggatg gttctctaag gatcaacgta gatggctgag catcgtctac ggaggcaagg      1620
     ctccaagggg atggggtgat aagaagtcac tcttctggcg ctccatcttc tatacttttt      1680
     aatgcgttta tcgttttctc cgactctctc gtcgttaact agaaccattc tgtttatcag      1740
     atggttgtga aacaggttca acctgtgact attaacaatc a                          1781
//