ID AY615209; SV 1; linear; genomic RNA; STD; VRL; 2587 BP. XX AC AY615209; XX DT 28-JUN-2004 (Rel. 80, Created) DT 28-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Gremmeniella abietina mitochondrial RNA virus S2, complete genome. XX KW . XX OS Gremmeniella abietina mitochondrial RNA virus S2 OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2587 RX DOI; 10.1016/j.virusres.2004.12.005. RX PUBMED; 15845253. RA Tuomivirta T.T., Hantula J.; RT "Three unrelated viruses occur in a single isolate of Gremmeniella abietina RT var. abietina type A"; RL Virus Res. 110(1-2):31-39(2005). XX RN [2] RP 1-2587 RA Tuomivirta T.T., Hantula J.; RT ; RL Submitted (30-APR-2004) to the INSDC. RL Forest Pathology, Finnish Forest Reseach Institute, Vantaa Research Center, RL Jokiniemenkuja 1, P.O.B. 18, Vantaa FIN-010301, Finland XX DR MD5; 44e296d81fc3cd9b0f0bf8546241587c. XX FH Key Location/Qualifiers FH FT source 1..2587 FT /organism="Gremmeniella abietina mitochondrial RNA virus FT S2" FT /host="Gremmeniella abietina type A" FT /isolate="SurS4" FT /mol_type="genomic RNA" FT /db_xref="taxon:279538" FT CDS 269..2494 FT /codon_start=1 FT /transl_table=4 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6GYC2" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q6GYC2" FT /protein_id="AAT48883.1" FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFRCLTKHLKHHGVVST FT VKIFKQIRLHVTRYLCGSPLRTNSMMIGIDKDGWPKMINFLKPLANGTRSDKQLLLSIL FT FITRSFVEKDKSKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKN FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQN FT PLNDWENNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNG FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCHINKFKDYIILGDDIVIHNDKVA FT KKYIEIMGKLGVGLSDSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM FT NLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFAL FT NNTFGYSTYDHKRSFLISKEYSKDLPGPKIMQDLIXYVISTGLSNLTVESVNKSLKFVD FT TIIDNKSLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI FT LPIMKGSNRKILELQTIGKIYQNGIQEINNTDFEIFGSSQMIHPNESLGIQEGSSLNSF FT SSLSSSIDTNLVFIQNELNVIAKKNWMPPATEDSVADSYAAFAAMFN" XX SQ Sequence 2587 BP; 947 A; 400 C; 402 G; 837 T; 1 other; tggatatatg aagaattcga ccttcccacg cgtacgtgta aacagggcta atcacccggc 60 caagtataat tttcttggtc ccagttagca atactatgag agtattctag atttcttcga 120 gtgtcccttt tggttaattt ctgaaggctg gaaactccaa ccgttggaaa taccctgcaa 180 aagagctaag ttatagcatc gtagataact ataatcgctc ttgggccgca agtcggctat 240 gcggtacaac cgttaagact taattattat gaacaaaaat ttatttcaaa tagtaattaa 300 actattcgta atgatatttt tgaacacaga tgttaagctc ttcgtatctc tttattttag 360 atgtttaact aaacatttaa aacaccacgg ggtagtgagt acagtaaaaa tatttaaaca 420 aataagatta catgttactc gttacctttg tggatcacca ttgagaacaa actcaatgat 480 gatagggata gataaagatg gttgaccaaa aatgatcaat ttccttaaac cacttgctaa 540 tggtacaaga tcagataaac aattactttt atcaatcttg ttcattacaa gaagttttgt 600 ggaaaaagac aagagtaaac tagttcctga ctgaagtaca ataactcaac cccgaacaac 660 acaaaaggaa tatattattc cttctggatt tattaaggat tgagtgttga acaatcattt 720 aggaacttat aaaagtgagt ttgatgattc aaatcatttt gtatcagtta agagtagtcc 780 aactggacca tctacactga ctgcactatg aggactatga aatcatagtt atgaatcatt 840 taattgactt tttaagatta ctagtttatc tggtgttgat tatcttacaa aaatcatgaa 900 ctggacttga ttaaaagacc taggaaataa aaataataat aaatgatcta aacaattttt 960 aggatcttta tcattaattt atgacccaga atgtaaagtt aggattgtag ctatgttaga 1020 ttatacaaca cagctatttc tccgacctat acataatgac ttgtttaaac ttcttaagaa 1080 gttaccacaa gataggactt ttacccaaaa tccattaaat gattgagaaa ataatgaaca 1140 ctcattttga tcaatcgacc ttaccgctgc aactgataga tttccaatta gtttacaacg 1200 tcggttatta ctatatatat atagtgatcc cgaaattgca aattcttgac aaaatctatt 1260 agtacataga gaatacgctc gtaatgggtt gaatccaatt aaatattcag ttggacaacc 1320 tatgggggcg tattcgtcct gacctgcttt cacattatct catcatcttg tcgttcattg 1380 atgtgcacat ttgtgtcata tcaataaatt caaagattat ataattcttg gtgacgatat 1440 cgttatacat aatgataaag ttgctaaaaa atatatagaa ataatgggaa agttaggagt 1500 gggtctatca gatagtaaaa ctcacgtatc gaaagataca tatgaatttg ctaaaagatg 1560 aatccataaa ggacaagaaa tatcgccatt acctattaca ggaattgtta ataatataac 1620 aaatccctat atagtattaa tgaatttata cgatttcttt aaaatcaaaa gaaaccagta 1680 taacttctca ggtgatatac taactatgtt attaaaatta taccaaggct taaaaatcta 1740 taagggagat aaaagtaaaa aacattatta cttatctcta aatagattta aaaatcttga 1800 tatattttta tttgcgctaa ataatacttt tggatattca acatatgatc acaaaagatc 1860 atttttgatt tccaaagagt acagtaagga tttaccggga ccaaaaataa tgcaagattt 1920 aatatyttac gtaattagta ctggtttatc taatcttact gtggaaagtg tgaataaatc 1980 attgaagttt gtagatacca taatagataa taaaagtcta ttaaatatcg aagaccctaa 2040 tgatttgtca aaccttccat tatttaaagg ttttcaagca tatatctcta atcttcgaaa 2100 gactgttgaa gggtgaaata ataaatcgat ttcacttatc gaagcctcaa gaggattagt 2160 ccaaatggat atacttccaa ttatgaaagg ttctaatagg aaaattttag aacttcaaac 2220 aattggtaaa atatatcaaa atggaataca agaaataaat aatactgatt ttgaaatctt 2280 tggttcttcc caaatgatac acccaaacga aagtttaggt attcaagaag gaagttcatt 2340 gaattcattc tcatcattat catctagtat agatactaac ttggttttta tccagaatga 2400 gttaaatgtt atagctaaga agaactgaat gcctcctgca actgaagatt cagttgcgga 2460 ttcatatgca gcctttgcag ctatgttcaa ttaatatcat taccgaatac agttgcaaat 2520 ctagatactc aaaaactata ttgagtctag actccaactg gggttttaca cttatgtgta 2580 aaacacc 2587 //