ID AY563023; SV 1; linear; genomic RNA; STD; VRL; 8289 BP. XX AC AY563023; XX DT 01-SEP-2004 (Rel. 81, Created) DT 28-OCT-2021 (Rel. 144, Last updated, Version 3) XX DE Anativirus A1 isolate TW90A, complete genome. XX KW . XX OS anativirus A1 OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Picornavirales; Picornaviridae; Anativirus; Anativirus A. XX RN [1] RX DOI; 10.1016/j.virusres.2007.06.023. RX PUBMED; 17686542. RA Tseng C.H., Tsai H.J.; RT "Sequence analysis of a duck picornavirus isolate indicates that it RT together with porcine enterovirus type 8 and simian picornavirus type 2 RT should be assigned to a new picornavirus genus"; RL Virus Res. 129(2):104-114(2007). XX RN [2] RP 1-8289 RA Tsai H.J., Tseng C.H.; RT ; RL Submitted (01-MAR-2004) to the INSDC. RL Graduate Institute of Veterinary, National Taiwan University, No. 1, Sec. RL 4, Roosevelt Road, Taipei 106, Taiwan XX DR MD5; 5809634bc3eade7c2698afa2a4709cc3. DR EuropePMC; PMC1900287; 17392358. DR EuropePMC; PMC4376133; 25726971. DR EuropePMC; PMC4615790; 26158858. XX FH Key Location/Qualifiers FH FT source 1..8289 FT /organism="anativirus A1" FT /isolate="TW90A" FT /mol_type="genomic RNA" FT /db_xref="taxon:2870363" FT 5'UTR 1..425 FT CDS 426..7991 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q672R3" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR036203" FT /db_xref="UniProtKB/TrEMBL:Q672R3" FT /protein_id="AAT67220.1" FT /translation="MASSTSFSCYKNNVTKNECTSFHAPVEMMPRCMQHSAVNHYYCAR FT HYGKRPNVCCACESIMCGRDVSWAFIKKQARENFYKAYCSEKMKRVPEEVQFQGRLPDC FT DVTDCLHRVCDHHEGRAKIGDLKTCCFCSRYGEFSDPYDWMVANRRYEWVACNGRQFPV FT SQHPACIPDGKVHMRCPLHAGRKSACCTCEHLKMESAIRKTGNTEVKCAEKQGLKSPGS FT NEPVNVLVGKFHCTDMKYIAPYQIRLHCCDTGDHGICGKHFNNTICCRCLKHLNSTSKW FT DTNQHCCADHEVTKTERRMQIFKTPHCKVVPYMKVVDEEKEMSSSEPMESNWTCVGKYQ FT QSYDFVKQKVSVTKDVDVPDTTREDLFRYGEAIDFPCYFTGRRKSCGPQWKCYHPPGSK FT RLHWYCSGHYDERPRRYACCACWDDSANVNKDTVKEMWYAFKRNKIACAEKQGQVQSNQ FT TGNSPNVTPVNATNGSQVTTINYYGAQYAQAYNPSSQTMDPSQFTEPMVSLTSAATGIP FT MLQNPSAEECGYSDRMMQLTAGNSTLITQEAAAGAVIAYGRWPGDTDYSGAAVDLPTRP FT GPSCDRWYTEDTFYWSKTGLNTTSGGEATGHVVCGGLPGVLIKQGVFGQNCAFHYLWRG FT GFAVHVQCNASKFHQGMLMVVAIPELEMKNMKPEYFYRWNNYQENPGTTEQAFVPTQLN FT VFPHQYINLRTNNSATLVLPYVNLCPQSCPVIHSPWVIAIAVMVPLDYSTGATTEVPIT FT VSICPMESEFGGLRNATILQGVPTFQVPGSQQFMTTLRNDGFPVMPDFEKTHSFNLPGR FT VRNLLEVAQIPTLVTGLKEGTEGWHRPWLVNIEQSMNSGAQIFQMDMSLMSVNFESTYL FT GQLARMYAQYRGDVIITLTFCGTAMTTGKILIAYTPPGANPPADRTEAMLGTHVVWDIG FT LQSSVTMAIPFISTVQARYTGVEESTLSYCGYITAWLQTKLVHPAGVPTTSPIVVYASA FT SNNFTFKCPIDSAYFQGLGDQITSQVEGLMNSIGGALQLPSTTPGVPQISAPPPSNNEG FT LTITEGGSGNLTAIETGVAQTSAADVQMATRVTKATFSAQDTDVEFFFSRYMLIGSVGS FT RQGTQDFAKFDMSFEAIKGASRAIRTKFQMFTYMRFDLDVVLEPLEEIPYQVMYCPTGS FT VVPANSIDNWNTTCNAVITQRPGKNVSFRVPFTSPGNFFATAYNGYNTFDLTGGYAQPP FT NGKLGTVCIRKMKTTQDTFSFLVYVRPVNIEVFCPRPIVTYNTQVAVTRSKYRIVSVPE FT ESPEASRMHTTVFAHKQGPVTFQGLGDWLKNLVSSGGEAFSDGLTRGITSALDDYNAKS FT SEVTPRTAKWVKTILKWLTRIISSMVIAVRSGGDPGIMAALGVSLGIDILTTDPFDYMK FT QMILANFGWAHKQGPSDWLKDFNAAINAVKGLDWIATKIQEFIKWLAGVESEVKEKSEK FT LQNVLDAIPLYISEWDDYEKAKFKYREQSVLDLAEKILESKRVLLEMQKTDNRIYLTLV FT KYAEKASKFIQNSRKRPFEPIGMLVHGKPGCGKSLLTSILGRQLCKMMGKGEPYSIPPD FT PDHFDGYTGQEVVIMDDLGQNPDGKDCALLCQMISTTEFIPPMASLEEKGIPFTSKFVL FT ASTNLENLAPITVSEPRAIQRRFQLDLEMTVCDEYKTASGHLDVAKAMKPCEEHESMHF FT KFCTPFICGKACKIYNRREKKFTTPDLLIGKLTGYRREKINTNDMVDALFQGPRKVVSL FT KPTLKFLDDEELKTPVKLMPECIEDLIRSVHDQRIIDWCEDQGYIFEPHMQHFIVERES FT KWLKTVIKTTVTSLAVLGAVCGLIYAAWRLWPTSEQGAYTGNQRAVLKRPELRTVQVQG FT PGTHPDLQYIQALLNNNIFPIETGSGPYTALGIFERWFVLPKHAVVEPMMVGGKQIDCD FT DIVELRSNGKMLELVALHCPTLNEFRDIRKHLPESIHGEDGCYLVMNSSVYPRMNTSVG FT RVSVFGLLNLDMQMTHNTLTYAYPTKTGQCGGVICKAGQVLGIHIGGDGSNGYAASLKR FT SYFASLQGQIVAERPARKSVNVRSTTSLQPSVWHDIVPGEKEPAVLSKFDKRCEVDFEK FT ALFSKYEQNVAVPENENVRTATLHYLEQIRPLMPENVTEPLPLEDVVYGMEGLEALDLN FT TSAGYPYCTMGISKKSLIPPKGEPLTRLQEALDLHGTRLPFVTFLKDELRPKDKIKVGK FT TRLIEASSLNDTIHMKTHLGRLFAVFNQNPGTTTGSAVGCNPDTDWSKFVNMIGHDNIC FT CFDYKNFDASLGSVWFEEVKFILRSLGFDPQITDSMIDHICNSTHIYRNKEYDVEGGMP FT SGCSGTSIFNSIINNIIVRTLVLDTYKGIDLDQLRILAYGDDLLVSYPFPLDPEALARA FT GKVYGLKMTPADKSEHFDGPKKIWEVTFLKRGFKPDSRYPFLIHPVYPMDQVYESLRWT FT RKPSETQQHVRSLCELAWHNGEEEYNNFLSIVRSTPVGRALTLPAYQVMCQKWYDSF" FT mat_peptide 426..1778 FT /product="leader" FT /note="L" FT mat_peptide 1779..1985 FT /product="VP4" FT mat_peptide 1986..2744 FT /product="VP2" FT mat_peptide 2745..3473 FT /product="VP3" FT mat_peptide 3474..4310 FT /product="VP1" FT mat_peptide 4311..4346 FT /product="2A" FT mat_peptide 4347..4670 FT /product="2B" FT mat_peptide 4671..5669 FT /product="2C" FT mat_peptide 5670..5978 FT /product="3A" FT mat_peptide 5979..6044 FT /product="3B" FT mat_peptide 6045..6599 FT /product="3C" FT mat_peptide 6600..7988 FT /product="3D" FT 3'UTR 7992..8226 XX SQ Sequence 8289 BP; 2552 A; 1575 C; 1964 G; 2198 T; 0 other; ccccccccca taccttttcc ccctctttaa cggcaatggt taatggacta aggataaagg 60 attatggact tatatgatgt gcccgacatg gaattcggga aatctggatc taagggttac 120 ctcaaaggta gtgaaattcc ctcgcagggg tatagtagct agctttgtgc cttagtgaag 180 ggaccgtgtg ttctagacat ggtagttgtg taggtacaag aggacttcat ttgaatatcc 240 tcgatcccgg acctaaatta ccttgtggat ttccggagga atttaggaaa ccacctcctt 300 cgggaggcta gtaggagctt acatgactct cggattggga agtccgagct ggaccatgac 360 tgggtgatag cctgccggct ggcgcagttc acatggtata gtcagttgaa aataaataga 420 aaatcatggc atcctcaact tctttttctt gctacaaaaa caatgtaact aagaatgaat 480 gtacctcatt ccacgcacct gtggaaatga tgcctcgatg catgcaacac tctgcagtta 540 accattatta ttgtgctagg cactatggaa aaagacctaa cgtgtgttgt gcatgtgaga 600 gtataatgtg tgggagagat gtatcatggg ccttcattaa gaaacaagcc agagaaaatt 660 tttacaaggc ctattgttct gagaagatga agagggtccc agaagaagtt cagtttcaag 720 gcaggctgcc tgattgtgac gtcacagatt gtcttcacag ggtatgtgac catcacgaag 780 gaagagcaaa aattggtgat ttgaaaacat gctgcttctg cagtaggtat ggagaattta 840 gtgatcccta tgattggatg gtcgccaata ggagatatga atgggttgct tgtaatggta 900 gacagtttcc agtgtctcaa catcctgcct gtattccaga tggaaaggtc cacatgcgat 960 gcccattgca tgctgggaga aagagtgcat gttgcacttg tgaacacctc aaaatggaga 1020 gtgcaattag gaaaacaggc aacactgagg tcaagtgtgc tgagaagcag ggattaaaat 1080 ctccaggatc aaatgagcct gtcaatgtcc ttgtagggaa gtttcattgc actgacatga 1140 agtacatagc cccgtatcag attaggctcc actgttgtga cactggtgac catggaattt 1200 gtggaaaaca ctttaataat actatttgtt gtagatgtct caaacacctc aattcaacaa 1260 gtaagtggga cacaaaccaa cattgctgtg cagatcatga agtcactaaa acagaaaggc 1320 gaatgcagat tttcaaaacg cctcactgta aagtggttcc atacatgaaa gttgttgatg 1380 aagaaaagga aatgagttcg agtgagccta tggaatctaa ttggacatgt gtgggtaaat 1440 accagcagag ttatgacttt gtgaaacaga aggtgagtgt caccaaggat gtagatgtgc 1500 cagacacaac aagggaggac ctcttcagat atggagaagc tattgatttc ccctgttatt 1560 tcactggtcg aaggaaaagt tgtggcccac agtggaagtg ttaccatcct ccagggagca 1620 aaagacttca ttggtattgt tcaggacact atgacgagag accacgccgg tacgcgtgtt 1680 gtgcgtgctg ggatgacagc gcaaatgtaa acaaagacac tgtcaaggaa atgtggtatg 1740 cctttaagag aaataagatt gcatgtgctg aaaagcaagg tcaagtgcaa tccaatcaaa 1800 ctggcaattc tccaaatgta acaccagtta atgccactaa tgggtcacaa gtaacaacta 1860 ttaattacta tggggcacaa tatgcacagg catataatcc atccagtcag acaatggatc 1920 catcacagtt tactgaacca atggtaagcc taacatctgc tgcgacagga attcccatgt 1980 tacagaatcc atcagcagag gagtgtggat attcagatag gatgatgcaa cttacggctg 2040 gtaactccac actcattaca caggaagctg cggctggtgc tgtgattgca tatggtagat 2100 ggcctggaga tacagactat tctggagctg ctgttgactt gcctacaaga ccaggtccct 2160 catgtgacag atggtatact gaagacacct tttactggtc aaaaactgga ttgaatacaa 2220 cttctggtgg tgaggcaaca gggcatgttg tttgtggtgg cttacctggt gttctcataa 2280 aacaaggtgt ctttggtcag aattgtgcat tccattacct ttggagagga gggtttgctg 2340 ttcacgtgca gtgtaatgca agtaagttcc atcagggaat gttgatggtt gtggcaatac 2400 cagagcttga gatgaagaat atgaaaccag aatatttcta taggtggaat aattaccaag 2460 agaacccagg gacaacagaa caggcttttg ttccaacaca actgaatgtc tttccacatc 2520 agtatattaa tctcaggact aacaatagtg cgacactggt gttgccttat gtaaatttgt 2580 gcccacaatc ttgtccagtt atacacagtc cttgggtgat tgccattgca gtgatggtac 2640 cactagatta tagtacagga gcaacaacag aagtccccat tacagtgtca atttgtccaa 2700 tggagagtga gtttggaggt ctgagaaatg caactatctt acaaggagtg ccaaccttcc 2760 aagtacctgg atcacagcag tttatgacaa cactgagaaa tgatggattc ccagttatgc 2820 cagactttga aaagacacac agtttcaacc tccccggaag ggttaggaac cttctagagg 2880 ttgcacaaat accaacattg gtaactggtt tgaaagaagg aactgaggga tggcatagac 2940 cttggctagt aaatattgag cagagtatga attctggtgc acaaattttc caaatggata 3000 tgtcactcat gtcagtcaat tttgaatcta catatttggg acaattggct agaatgtatg 3060 cacaatatcg gggtgatgtc ataataactc tgacattctg tggaacagca atgacaactg 3120 gtaagatcct cattgcttac actcctcctg gagcaaatcc acctgctgat agaacagaag 3180 ctatgttggg aacccatgtg gtctgggaca ttggattgca atcttcagtc acgatggcaa 3240 ttccttttat atccacagtg caggcaagat atactggggt tgaagaatct acactgtctt 3300 actgtgggta cataacagcc tggctacaga caaaattggt tcatccagct ggtgttccaa 3360 ccaccagtcc cattgtagtg tatgcttcag ctagtaataa cttcaccttc aagtgcccaa 3420 tagatagtgc atacttccag ggacttggtg accaaataac ttcacaagtg gaagggttga 3480 tgaactcaat tggtggggct ttgcaactcc cctctacaac accaggagtc ccacagatta 3540 gtgcaccccc accgagtaat aatgaagggt taaccatcac tgagggaggc agtggcaact 3600 taacagcaat tgaaacaggt gtagcccaaa catctgctgc agatgtccaa atggcaacta 3660 gagtcacaaa ggcaacattt tctgcacaag acactgatgt agagtttttc ttctcaaggt 3720 atatgcttat aggatctgtt ggaagtcgac aaggaaccca ggactttgcc aaatttgaca 3780 tgtcttttga ggccattaag ggagctagta gggcaattag aacaaaattt cagatgttta 3840 catatatgag gtttgacttg gatgtggttc tggagccgct agaagagatt ccttatcagg 3900 tgatgtactg ccccactggg tcagttgtac cagcaaactc tatagataat tggaacacaa 3960 cttgtaatgc agtgattact caacgacctg gtaagaatgt ttcatttaga gtaccattta 4020 cgtcaccggg gaatttcttt gccacagctt ataatggtta caatacattt gatttgactg 4080 gtggttatgc acagccccca aatgggaaac ttggaacagt ttgtattagg aagatgaaaa 4140 caactcagga caccttttcc ttccttgtct atgttagacc agtgaacatt gaagtgtttt 4200 gcccaagacc aattgtcaca tataatacac aggtggcagt aaccagatca aaatatagga 4260 tagtttcagt tccagaagag agcccagaag caagtagaat gcacacaact gtgtttgcac 4320 acaaacaagg acctgtgaca ttccagggat tgggagactg gttgaaaaat cttgtttcat 4380 ctggtggaga agcattctct gatggtctaa caagaggcat aacatcagcc cttgatgact 4440 acaatgcaaa atcaagtgag gttacgccga gaactgccaa gtgggtgaaa actatcttaa 4500 aatggttaac aaggataatt tcatcaatgg taatagcagt tagatctgga ggagacccag 4560 gaattatggc tgcactaggt gtgtcccttg gaattgacat tttgaccact gatccatttg 4620 actacatgaa gcagatgatt ttagcaaact ttggatgggc acacaagcaa ggacctagtg 4680 attggctcaa ggacttcaat gctgccatta atgctgtcaa gggcttggat tggattgcaa 4740 caaaaattca ggaatttatt aagtggttgg ccggtgttga aagtgaagtc aaagagaaga 4800 gtgagaagct ccagaatgtt ttggatgcca ttccgctgta cataagtgag tgggacgact 4860 atgagaaggc aaagttcaag tacagagagc aatcagtttt ggatttggct gagaaaatac 4920 ttgagtcaaa gagagtgctc cttgagatgc agaagacaga caataggatt tacctcactt 4980 tggtgaagta tgctgaaaag gccagtaaat tcattcagaa ttcaaggaaa agaccatttg 5040 aaccaattgg aatgcttgtt catggaaaac ctgggtgtgg aaagtcactt ttaacatcaa 5100 ttttgggaag acaattgtgt aagatgatgg gtaaaggaga gccatactct attccaccag 5160 atccagatca ctttgatggg tacacaggtc aagaggttgt gataatggat gacttgggac 5220 agaatccaga tggaaaagat tgtgctctgt tgtgccaaat gatttcaacg acagagttta 5280 ttccacccat ggcaagtcta gaagagaaag gcataccttt tacatcaaag tttgtcttgg 5340 cctcgaccaa cctggagaac ttggcaccga taactgtgtc agagcctagg gcaattcaga 5400 ggagattcca actggatttg gagatgacag tgtgtgatga gtacaagaca gcatcaggac 5460 acctcgatgt ggctaaggca atgaaaccat gtgaagaaca tgagtcaatg cacttcaagt 5520 tttgtacacc attcatttgt ggtaaggcct gcaagattta caatagaaga gagaagaagt 5580 ttaccactcc tgatttactg attggcaagt tgactggtta cagaagggag aaaattaata 5640 caaatgacat ggttgatgca ctgtttcaag ggccgaggaa agttgtaagt ctgaaaccta 5700 ctctcaagtt cctggacgat gaagaactca aaactccagt gaagctcatg ccagagtgca 5760 ttgaagatct cattagaagt gtgcatgacc aacgcatcat tgactggtgc gaagaccagg 5820 gatacatttt tgaaccacac atgcagcact ttatagtaga gagagagagt aaatggctga 5880 agacagtaat aaagactaca gtcacttctt tggctgtttt gggagctgtg tgtggattga 5940 tctatgcagc ttggagactc tggccaacat ctgagcaagg agcatacact ggaaatcaga 6000 gagctgtttt gaaaagacct gagttaagaa cagtgcaagt gcaggggcct ggaactcatc 6060 cagatcttca gtatatccag gcattgctca acaataatat cttcccaatt gagactggat 6120 ctggaccata cacagcctta ggcatatttg aaagatggtt tgttctccca aaacatgctg 6180 tggtggagcc aatgatggtt ggtggcaaac aaattgactg tgatgacata gtggaattga 6240 gatcaaatgg aaaaatgctt gaactcgttg cccttcattg cccaacattg aatgagttca 6300 gagatattag aaaacacctg cctgagtcaa ttcatggaga ggatggttgt tatctggtga 6360 tgaattctag tgtgtatcca agaatgaata catctgtggg gagagtgtca gtctttggct 6420 tgctgaacct ggatatgcag atgactcaca atacactcac ttatgcctac ccaactaaaa 6480 caggacaatg tggtggtgtc atttgtaaag caggacaagt attggggatt cacattggtg 6540 gtgatggttc aaatggatat gctgcatctc tcaaaaggtc atactttgca tctcttcaag 6600 gacagattgt ggctgagaga cccgccagga aaagtgtcaa tgtcagatcg acaacttcac 6660 ttcaaccatc ggtttggcat gacattgttc caggtgagaa ggaacctgca gttttgagta 6720 agtttgacaa gagatgtgag gtggactttg agaaggctct attctccaaa tacgagcaga 6780 atgtggctgt ccctgaaaat gaaaatgtga gaacagcaac tctccattat ctggaacaga 6840 taagaccact gatgccagaa aatgtgacag agccactacc actcgaggat gtagtctatg 6900 gcatggaagg actggaagct ttagatttga atacatctgc tggataccct tattgcacca 6960 tgggtatttc aaagaaatca ctgattccac caaagggaga gcccttgact cgtctacagg 7020 aagcgcttga ccttcatggc acaagattgc cttttgttac tttcttgaag gatgagttgc 7080 gacctaagga caagattaag gttggaaaga caagattgat tgaagcctcc agtttgaatg 7140 acactattca catgaagaca catcttggac gcctgtttgc tgtgttcaat caaaatccag 7200 gtacaacaac aggttcagca gttgggtgca atccagacac tgattggtca aaatttgtca 7260 atatgattgg acatgataac atctgttgtt ttgattataa gaactttgat gcctctcttg 7320 gatctgtgtg gtttgaggaa gtgaaattta ttttgagaag tctaggtttt gacccgcaga 7380 ttacagattc aatgattgac cacatctgca attcaacaca catttacaga aataaggaat 7440 atgatgtgga aggtggaatg ccatcagggt gctcgggaac ctccatcttc aattcaatca 7500 ttaataacat cattgtgaga actctggtct tggacaccta caaaggtatc gatctcgacc 7560 aactccgtat tctggcctac ggtgatgacc tactggtgtc ctatccattt ccacttgacc 7620 cagaggcatt agcaagggct ggaaaggtgt atggtcttaa aatgacacct gcagacaaga 7680 gtgaacactt tgatgggcca aagaaaatct gggaggtgac cttcctgaag aggggcttta 7740 agcctgattc tcggtaccca tttctcattc atccagtgta cccaatggat caggtgtacg 7800 agtctctcag atggactagg aaaccttctg aaacacaaca acatgtgagg tcattgtgcg 7860 aattggcctg gcacaatggc gaagaggagt ataacaactt cctgagcata gtaagatcaa 7920 cccctgttgg aagagctctt accttacctg cctatcaggt aatgtgccag aaatggtatg 7980 actccttttg accctctctg ctttgcagga gggtcaagtg tattggtgtg gctagccaaa 8040 gggaatagcc cctcctaatg aggttgttgg gcgcggcgtc ccaactcaaa caaaacgcgt 8100 cggataattt cttaacacat aatcacttta atcattagtt gttaggattt taatcattag 8160 tttagatata gtttgttagt tgataattag atttgtgatt agtttaattg ttgattggca 8220 ttttataaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 8280 aaaaaaaaa 8289 //