ID AY559408; SV 1; linear; mRNA; STD; VRL; 3224 BP. XX AC AY559408; XX DT 22-MAR-2004 (Rel. 79, Created) DT 22-MAR-2004 (Rel. 79, Last updated, Version 1) XX DE Rice gall dwarf virus segment 3 major core capsid protein mRNA, complete DE cds. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3224 RA Fan G.C., Wu Z.J., Lin Q.Y., Xie L.H.; RT "cDNA cloning and sequence analysis of genome segment s3 of rice gall dwarf RT virus"; RL Unpublished. XX RN [2] RP 1-3224 RA Fan G.C., Wu Z.J., Lin Q.Y., Xie L.H.; RT ; RL Submitted (26-FEB-2004) to the INSDC. RL Plant Protection, Plant Virology, Kingshan, Fuzhou, Fujian 350002, P.R. RL China XX DR MD5; 43e1da3c3050a3df3d72de566cb952ad. XX FH Key Location/Qualifiers FH FT source 1..3224 FT /organism="Rice gall dwarf virus" FT /segment="3" FT /host="Rice" FT /isolate="Guang Dong" FT /mol_type="mRNA" FT /country="China" FT /db_xref="taxon:10986" FT CDS 36..3101 FT /codon_start=1 FT /product="major core capsid protein" FT /db_xref="GOA:Q6Q4H5" FT /db_xref="InterPro:IPR015312" FT /db_xref="InterPro:IPR016029" FT /db_xref="UniProtKB/TrEMBL:Q6Q4H5" FT /protein_id="AAS66757.1" FT /translation="MDVTGAPYSSGLNVRNVLLTESTSTFTPIETYNVQDDIRTIRISA FT KIAEESVVSRVPLPVSFKPISEITKLFDIIPISRGSTTSIVEHPQTSFMIKLRDNTFSD FT YACLDHLVAFEPALILHRLKMLFSILGKYASSIISEVPTLDVMIDNAQVTVIDMSKFDD FT RNMNTYAERLPRDIEVYAAKQDILKQYVRTSVNETPITFRDDLPIPVRERPTLYRRYIV FT PFTPVELSLYNMALQMLDLQYCHPLIVYKYLQDRAPPFLVVNDQIGLEMLSAGDGELLP FT RPVMEVLDYSLVYSSPLALNNLGSLLMSRIKTSIKVRSINEVSSSLSEIVNASSTVSNS FT ASSAIANMNVAGVETIAAFIIRSVLNPNISYAIIGKLDLDAFNDFIYGTCLLLLQAITP FT PSAIAAMSRVRINNALAYFLLRYICPQPVYTRLLQNEIIPSLTNTLEWSSVDRDILAAI FT YSNLFVADGRIWNLVSRYYREVPPEEVTQVSVPARDTSYGINETRGISLPYLFGDAITE FT MRPDNRLNDYKQRLNLPPRSPILIANPMRNNVVDLNNVNVKMDFIMDLYDQNNFVKSPA FT QWVRNSASNSALLAKFRDSVSNITGILENVLSNAYSNAVNTYCDSVYRAGVPLNWKYRV FT VIDPKDMMFVIFGVCPRYVLMGDSIPDFFAGSEDILILQLVRAIWEVMSNHMGNVPTRF FT FRMEDVQKDLSEMVSIILSKKIDVTRYFTDDMRSTTFSKEAWERFIARQVGEELPPLYR FT TILDQVETINNYMDQMMAIMPIVDHFYVVRNSGIAARGSVNPILAATTLNLNQINTTMI FT IRDWSELVRLVMTQERVDLNTSHSLFEAEFYKLSEIASNEFVRSNERGESEPHFTDVEA FT IRVNMYARYELKIYKEQGEFSKPTKLNKVMHEDLTSFVKSNIGKLYPPVFTIPIDIMLN FT DLGECTSTKTRMRSFKVDEYFKCFTGAQVIIPLDYVNLEHVGSIQDLQVMFNGSVSVRI FT KPWIIKENFDVNYVQTGNHEVLIDPLPNVLPI" XX SQ Sequence 3224 BP; 1028 A; 581 C; 690 G; 925 T; 0 other; ggcatttttc cacttggcca tttattccgt agcaaatgga tgtgactggt gcgccatatt 60 caagtggttt gaatgttaga aatgtgctac tgactgaaag cacctctacc ttcactccaa 120 ttgaaacata taatgttcaa gatgatattc gaacaattag aatatcagct aaaattgcag 180 aagaatctgt ggtcagcaga gtaccacttc ccgttagctt taagccaatt agtgaaataa 240 ctaaattatt tgatataatt ccgatatcta gggggtcgac cactagtata gtggagcatc 300 cacagacatc atttatgatt aagctacgtg ataacacttt cagtgattat gcttgtttgg 360 atcatttggt ggcatttgaa ccagcactaa tcttgcatag attaaaaatg ttgttttcaa 420 tattaggtaa atacgcttcg tcaattatat cagaggttcc aactctcgac gttatgattg 480 ataacgcaca agttacagtt atagatatgt ctaaattcga tgatagaaac atgaatacct 540 atgcagagag gttacctcga gatatagagg tgtatgcagc taagcaagat attttaaagc 600 aatacgttag aacatcagtc aatgaaacgc caattacatt tagagatgat ctgccaatac 660 ctgtaagaga aagaccaacg ttgtatcggc ggtatattgt tccatttact ccagtggaac 720 tatccctata caatatggca cttcagatgc tggatctgca atactgtcat cctttgattg 780 tatacaaata ccttcaggac agagctcctc cctttttagt cgtcaacgac caaattgggt 840 tagagatgct cagcgctggg gatggagagt tgcttccgcg tcccgtaatg gaagtacttg 900 actattcatt agtttattca tcaccgttgg ctctaaacaa cctcgggtcc ttgttgatgt 960 ctaggattaa gacgtcaatt aaggttagat ctatcaacga ggtttcatca tccttatcag 1020 agatagtaaa tgcatcatca actgtttcca actcggcgtc tagcgccatc gctaatatga 1080 atgttgctgg agttgagaca atagcagcgt ttataataag atcagtgctt aatcctaaca 1140 tatcttatgc aatcatagga aaattggatt tagatgcatt caatgatttc atttatggca 1200 cttgtctgct attattacag gcgattacac caccaagtgc aatcgcagca atgtcaaggg 1260 tacggataaa taacgcatta gcttattttt tgctaagata catctgtccg cagccggttt 1320 acaccaggct actgcaaaat gaaataatac catcactgac aaacacgctc gaatggagta 1380 gcgttgaccg agatatcctg gcggctatat attcgaattt gtttgttgcg gatggtagga 1440 tatggaacct agtaagtagg tactataggg aagttccacc tgaagaggtg actcaggtat 1500 cagttcctgc gagagatact tcttatggca ttaatgaaac aagaggaata agtcttccat 1560 acttatttgg agatgcaatc acggaaatgc ggccggataa cagacttaat gactataaac 1620 aaagattaaa cttaccacca aggagcccga ttctaatagc gaatcctatg aggaataatg 1680 ttgtagattt gaataacgtg aacgtcaaaa tggattttat aatggatctt tatgaccaaa 1740 ataatttcgt gaagtcacca gctcagtggg tgaggaatag cgccagtaat tcagcgctac 1800 tagcgaaatt tagagacagt gttagtaata taacaggaat actcgaaaac gtactgtcta 1860 acgcgtattc taacgccgta aatacgtact gcgattcggt atatagagca ggagtgccgt 1920 taaactggaa gtatagagta gtgattgacc ccaaagacat gatgttcgtt atatttggag 1980 tgtgtccacg ctacgttctt atgggagatt caatacccga cttctttgcc ggaagtgagg 2040 acattttaat tctgcagttg gttagagcta tttgggaagt tatgtctaac cacatgggaa 2100 acgtaccaac aagattcttt aggatggaag atgttcaaaa agacttgagt gaaatggtgt 2160 caattattct gtcaaagaag atagacgtta ctaggtactt tacggatgat atgaggtcaa 2220 cgacgttttc taaggaagcg tgggaacgtt tcatcgcaag acaagttggt gaggagctac 2280 cacctctata cagaacaatt ttggatcagg tagaaaccat taataactat atggatcaaa 2340 tgatggctat tatgcccatc gttgatcatt tttatgttgt ccgaaacagt ggtatagctg 2400 ctcgcggatc tgttaaccct attttagcgg ctactacgct aaacctgaac caaataaata 2460 caacaatgat catacgggac tggtcagagt tggtaaggtt ggtgatgaca caagaacgag 2520 tagatttaaa tacatcacac agcttatttg aggctgagtt ctacaaacta agcgagatag 2580 catcaaatga gttcgtgaga tctaacgaac gtggagaatc tgagccacat tttactgatg 2640 tggaagcgat aagagtcaac atgtatgcaa ggtatgaatt aaaaatatat aaggaacaag 2700 gagagttttc aaaaccgact aaattaaaca aagtaatgca cgaagattta acttcatttg 2760 taaaatccaa cataggtaaa ctgtatccgc ctgtgtttac cataccaatt gatatcatgc 2820 tgaacgattt gggtgaatgc acctcgacaa aaacgagaat gcgatcgttt aaagtagacg 2880 aatactttaa atgctttact ggagcacaag tcataatacc tttggattat gtaaatctgg 2940 agcacgtggg atcaatccaa gacttacagg taatgttcaa tggaagtgtt tccgtgcgaa 3000 ttaagccatg gataattaag gaaaatttcg atgtaaatta cgttcagacg ggtaatcacg 3060 aggtgctaat tgacccgtta ccaaacgtac tacccatata aaacactaac acatctgctt 3120 gagtgtggtt gctaagaaca tccaatgcgt gccttgtccg gggaggggca atcgtgacct 3180 attatttgcg aatgataggg ttggccaatg ctggaaaagt tgat 3224 //