ID AY556484; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC AY556484; XX DT 22-MAR-2004 (Rel. 79, Created) DT 22-MAR-2004 (Rel. 79, Last updated, Version 1) XX DE Rice gall dwarf virus segment S2, complete sequence. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3514 RA Fan G.C., Wu Z.J., Lin Q.Y., Xie L.H.; RT "Molecular Characterization of Genome Segment S2 of Rice Gall Dwarf Virus"; RL Unpublished. XX RN [2] RP 1-3514 RA Fan G.C., Wu Z.J., Lin Q.Y., Xie L.H.; RT ; RL Submitted (24-FEB-2004) to the INSDC. RL Plant Protection, Plant Virology, Kingshan, Fuzhou, Fujian 350002, P.R. RL China XX DR MD5; f270354a6f1f233ebeb40e7938a8e575. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Rice gall dwarf virus" FT /segment="S2" FT /host="rice" FT /mol_type="genomic RNA" FT /country="China:Guangdong" FT /db_xref="taxon:10986" FT CDS 14..3460 FT /codon_start=1 FT /product="minor outer capsid protein" FT /note="acquired by vector insects and transmitted to host FT plants" FT /db_xref="InterPro:IPR008580" FT /db_xref="UniProtKB/TrEMBL:Q6Q6D2" FT /protein_id="AAS66885.1" FT /translation="MSYPGNVHSLRDLYNVFKDAPNRERLILDMNSQLARIDNIAQILT FT MTEEQEKEVIAKMSASLANLGLNMDNAIRELKNMETVHMDRVSVLTVYQSAVLNITNNT FT HTISDSMKSIMYDLSGYVNTTIYPTIQSPATEDRSSLIPLNYKNMKNIFDDKHTIVFAT FT VIGPHCVDFTTEDVTNVSWVVDSHEIIKITYYPSSLIMETSIVGNRYLQYQLSLSNQTI FT DEYDNNGPYSCLLVFCVVGANGLLDIYSMSSQQVRKYVNDYEVGESSLIGYSTKHGSLH FT LSSNDIRNISHELSGSPYIDVRVTYSITAAFPDSQLLSMLLDNIQQSLGTLTACESKSF FT DDAYRAAMDNQFTKADVLTSSIITMRSSLNSLISSSPLLSDDTIRIVDDCTFQLASALT FT LTNEFASDSANLLGTFKVKQTTIDRHSNTKISEGKAVYLSPTLATMNVHSGSVVVSTDS FT FHNNNALKVMLLAPGLVKPDNVNFDLLSVKSNNVIDLVSDYKLDDAIIQFTDQPDYSST FT TSIANAKSVVYMTKTGCIGLTYSNPNELILNMSLQLNSAAPSLGGVVNNNTTFSLTIGS FT TIINYVTDFEITDFTDSSGKQSLKLTSSVNLLTKLSVDMIFYAVSINAGGVIATDTHKY FT TDTGFDSSNYTYGWEMYDSAALNDYQDMTVITPPKFTAKMLKPQDASKFNGDCMGGTYK FT KGRNILVIAGNRIFYNGVSVYFKMQKNSMISLKYFINPSGLSTVDTCDVRITRNAAFLT FT QIDTKLMSVQSVLNDVQRRIDIINQLMQPSGIQTLATIIQGIGGVVSLAMPLLGAIVVT FT IGAIVSIADPNHHGVDYQAVLNAFHSWCQYAVVARMNYGLLKADDPKLDILKRISDGSV FT NTFRNKPKKITLPGIDDEVIRGTSTDYIDTGINVRYNSMGLFGEGRLEEWMANTALKVQ FT DGTANVFQKNLFSLLQKRKIVPMHARVEIIQTEKIGDVYRNTILYAGINEGSYIENSVY FT LTRSGNTRIKRLNMTSGPGMFKAVTESTTEVGNFKAVDWTLSGMTKEEIYNAAGLMYPK FT KNPAHSEVQDVYESVIRDMAEIDDTWVLQHHKTVMLPGQIEAFEHLIRVSANKFQYAFI FT GSNCQNFADDVVGILSQFKRPRRWVDENDFKQYIQSIYDEL" XX SQ Sequence 3514 BP; 1136 A; 629 C; 734 G; 1015 T; 0 other; ggcatttttt gcaatgtcgt accctggaaa cgttcactca ttgagggacc tgtataatgt 60 gttcaaagat gcgccgaacc gcgagaggct catcctggat atgaattctc aattggcgag 120 aattgacaat atagcacaga ttttaactat gactgaagag caggaaaagg aagtgatcgc 180 taaaatgtca gcatcgctag ccaacctagg attaaacatg gataatgcta tccgtgaact 240 gaaaaacatg gaaacggtac acatggatag agtgtctgtc ctgaccgtct atcaatcggc 300 ggtgctaaac atcacaaata atacgcatac aatatctgat agtatgaaat ctatcatgta 360 tgatctgtcg ggatatgtaa atactaccat atatcctacg atccagtctc ctgcaactga 420 ggaccgatcc tcattaatac ctttaaatta caagaatatg aaaaacatct ttgatgataa 480 gcatacaata gtgtttgcca ctgtaattgg gcctcactgt gttgacttca ccaccgaaga 540 tgtaacaaac gtttcatggg tcgttgattc gcatgagata atcaaaataa cgtattaccc 600 atcctcattg attatggaaa ctagtattgt cggaaacaga tacctgcagt atcagcttag 660 tttgtcaaat caaactatcg atgaatatga taataacggc ccttattcat gcctacttgt 720 attctgcgtg gtaggtgcga acggtttatt agatatttat tctatgtcat cacagcaagt 780 gagaaagtat gtaaatgact acgaagttgg agaatcatcg ctgattggct attcgacaaa 840 gcatggcagt ctacatctca gttctaatga tattagaaat atatcacatg agctgagtgg 900 gtcgccatat atagacgtac gtgttacgta ctcaattaca gctgcgtttc cggactcaca 960 attgctgtca atgttattgg ataatattca gcagtctttg ggtacgttaa cggcatgcga 1020 atctaagagt ttcgatgatg catatcgtgc agctatggat aatcaattca caaaggctga 1080 tgtacttaca tctagtatta taactatgcg gagttcatta aatagtttga tatcatcatc 1140 gcctctcctt agtgatgaca ctatcaggat agtcgatgat tgcacgtttc aattggcatc 1200 tgcacttacg ctaactaatg aatttgcatc tgattccgca aatctgctgg gaactttcaa 1260 agtgaaacaa accactattg ataggcattc aaacactaaa atctcagagg gaaaggctgt 1320 atatctctct ccgactttgg cgacaatgaa cgttcatagt ggatccgtgg tggtatcaac 1380 tgattcattt cataataata atgcattgaa ggtcatgcta ttagcacccg gattggttaa 1440 gccggataat gttaatttcg acctattatc agttaagagt aacaacgtta ttgatttagt 1500 atctgattac aaattagatg atgctatcat acaatttaca gaccaaccag attactcatc 1560 cacgacttct atagctaatg ctaagtcagt tgtatatatg actaagactg gatgtatagg 1620 attaacctat tctaatccga atgaattaat tcttaacatg tccttacaac taaattcggc 1680 ggctccatcg ctgggtggag tagttaataa taacactact ttttcactga cgattgggag 1740 taccataata aattatgtaa cagattttga aatcactgat ttcactgatt catctggtaa 1800 gcaatcttta aaattaactt caagtgttaa tctactgacc aaattatcag ttgatatgat 1860 cttttatgcg gtatcaataa atgccggagg cgtaatagcc acggatacgc ataaatatac 1920 agacactgga tttgattctt ccaattatac atatggttgg gagatgtacg actcagcagc 1980 tttaaatgat tatcaggaca tgaccgtgat aactccgcca aaatttacgg cgaagatgtt 2040 gaaaccgcag gacgcatcca aatttaatgg tgattgcatg ggcggcactt ataagaaggg 2100 taggaatata cttgtaattg ctggcaaccg catcttttat aacggagtgt cggtgtattt 2160 taaaatgcag aaaaattcga tgatatcgtt aaaatacttt ataaatccat ctggtctatc 2220 caccgtggat acatgtgatg ttagaataac gcgtaatgcc gcattcttaa cgcagataga 2280 taccaagtta atgtcggttc agagcgtctt aaacgacgta caacggagaa ttgacataat 2340 taatcagtta atgcaacctt ccggaataca aacgctagct actatcatac aaggaatcgg 2400 cggagtagtt tcgttggcta tgccgttact tggtgctata gtcgtaacca ttggagccat 2460 tgtatcgata gctgatccca atcatcatgg tgttgattat caggcagtgt taaatgcatt 2520 tcactcatgg tgtcaatacg cagtggtggc aaggatgaat tatggcttgc taaaagcaga 2580 tgatccaaaa cttgatatac ttaagcggat atcagatgga tcagttaata cgttcagaaa 2640 caagccgaag aaaatcacgt tgccaggtat cgatgatgag gtaatcagag gaacttcaac 2700 cgactacatt gatacaggta tcaatgtgag atataattca atgggattat tcggtgaagg 2760 tagattggag gaatggatgg ctaatactgc tcttaaagtg caagacggta cggctaatgt 2820 cttccagaag aatttatttt cattattgca aaagagaaaa atcgtgccaa tgcatgcacg 2880 cgtagagata attcaaactg aaaagattgg agatgtatat cggaacacaa tcttgtacgc 2940 tggtataaat gaaggttcat atattgaaaa cagtgtttat ttgactaggt caggtaacac 3000 taggattaaa agattaaata tgacatcagg accaggtatg tttaaagcag taactgagtc 3060 aactactgaa gtgggcaatt ttaaagcggt agattggacg ctatcaggaa tgactaagga 3120 agaaatatac aatgcagctg gactcatgta tccaaagaaa aatccagctc attctgaagt 3180 acaagacgtg tatgaatctg tcatacgaga tatggctgaa attgatgaca cttgggtgtt 3240 gcaacaccat aaaacggtca tgttaccagg tcaaatcgaa gcatttgaac atctgattcg 3300 agtaagtgca aataaatttc agtatgcatt catcggttcc aactgtcaga acttcgcgga 3360 tgacgtggtt gggatactgt ctcagtttaa gagacctaga cgatgggtag acgagaatga 3420 ttttaaacaa tatatacagt ccatttatga cgaactctag ggtgacgaag gagcaaagca 3480 ccgctcacat acgtggagag tggtggaact tgat 3514 //