ID   AY547324; SV 1; linear; genomic RNA; STD; VRL; 1368 BP.
XX
AC   AY547324;
XX
DT   10-MAR-2004 (Rel. 79, Created)
DT   10-MAR-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Potato virus Y strain O helper component proteinase gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1368
RA   Shi P.-J., Liu J.-L., Li X.-D., Zhu X.-P.;
RT   "Cloning and expression of potato virus Y-O helper component proteinase";
RL   Unpublished.
XX
RN   [2]
RP   1-1368
RA   Shi P.-J., Liu J.-L., Li X.-D., Zhu X.-P.;
RT   ;
RL   Submitted (11-FEB-2004) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
XX
DR   MD5; 7290943bbf76b6f3132d8e368d866a4d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Potato virus Y"
FT                   /host="tobacco"
FT                   /strain="O"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1368
FT                   /codon_start=1
FT                   /product="helper component proteinase"
FT                   /function="involved in aphid transmission, protein
FT                   cleavage, replication, long-distance movement, suppressing
FT                   RNA silencing"
FT                   /db_xref="GOA:Q6QD99"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q6QD99"
FT                   /protein_id="AAS49512.1"
FT                   /translation="SNADNFWKGLDGNWARMRYPSDHTCIDGLPVEDCGRIAALMAHSI
FT                   LPCYKITCPTCAQQYASLPVSDLFKLLHKHARDGLNRLGADKDRFIHVNKFLIALEHLT
FT                   EPVDLNLELFNEIFKSIGEKQQAPFKNLNVLNNFFLKGKENTAHEWQVAQLSLLELARF
FT                   QKNRTDNIKKGDISFFRNKLSAKVNWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNFF
FT                   EEIDPAKGYSAYEIRKHPNGTRKLSIGNLVVPLDLAEFRQKMKGDYRRQPGVSRKCTSS
FT                   KDGNYVYPCCCTTLDDGSAIESTFYPPTKKHLVIGNSGDQKFVDLPKGDSEMLYIAKQG
FT                   YCYINVFLAMLINISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMRIFYPDVHD
FT                   AELPRILVDHDTQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVG"
XX
SQ   Sequence 1368 BP; 427 A; 245 C; 313 G; 383 T; 0 other;
     tcgaatgccg acaatttttg gaagggtctg gacggtaatt gggcacgaat gagatatcct        60
     tcggaccaca catgtataga tggtttacct gtcgaggatt gtggtaggat tgctgcattg       120
     atggcacaca gtattctccc atgctacaag ataacctgcc ccacctgtgc tcaacagtat       180
     gccagcttgc cggttagcga tctgtttaag ctgttgcata aacatgcaag agatggtttg       240
     aaccggttgg gagcagataa agaccggttt atacatgtta ataagttctt gatagcgtta       300
     gagcatctaa ctgaaccggt ggatttgaat ctcgagcttt tcaatgagat attcaaatcc       360
     ataggggaga agcagcaagc accgttcaag aatttaaatg tcttaaataa tttcttcctg       420
     aaaggaaaag aaaatacagc tcatgaatgg caggtggctc aattgagttt gctcgaatta       480
     gcaaggtttc agaagaatag aactgataac atcaagaaag gtgatatatc tttcttcaga       540
     aataaattat ctgccaaggt aaactggaat ctgtatttgt cgtgcgacaa ccagttggat       600
     aaaaatgcaa atttcctgtg gggacaaagg gagtatcatg ctaagcggtt tttctcaaac       660
     ttctttgagg aaattgatcc agcaaaggga tactcagcat atgaaatccg caagcatcca       720
     aatggaacaa ggaaactctc aattggtaac ttagttgtcc cacttgattt agctgagttt       780
     aggcagaaga tgaaaggtga ttataggaga caaccaggtg tcagcagaaa gtgtacgagt       840
     tcgaaagatg gtaattatgt gtatccctgt tgttgcacaa cacttgatga tggttcagcc       900
     attgaatcaa cattctatcc gccaactaaa aagcaccttg taataggcaa tagtggtgac       960
     caaaaatttg ttgatttgcc aaaaggggat tcggagatgt tatacattgc caagcagggt      1020
     tattgttata ttaacgtgtt tcttgcaatg ctgattaaca ttagcgagga ggatgcaaag      1080
     gattttacaa agaaagtccg cgacatgtgt gtgccaaagc ttggaacctg gccaactatg      1140
     atggatttgg cgaccacttg tgctcaaatg agaatattct atcctgacgt gcatgatgca      1200
     gaacttccta gaatattggt cgaccatgac actcaaacgt gtcatgtggt tgactcattt      1260
     ggctcacaga caactggata tcatatccta aaagcatcca gcgtgtctca actcatcttg      1320
     tttgcaaatg atgaattaga atctgacata aaacattata gagttggt                   1368
//