ID   AY545924; SV 1; linear; mRNA; STD; VRL; 657 BP.
XX
AC   AY545924;
XX
DT   02-MAR-2005 (Rel. 83, Created)
DT   07-MAR-2007 (Rel. 90, Last updated, Version 3)
XX
DE   Cucumber mosaic virus coat protein mRNA, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-657
RX   DOI; 10.1016/j.jviromet.2006.11.032.
RX   PUBMED; 17275931.
RA   Siju S., Madhubala R., Bhat A.I.;
RT   "Sodium sulphite enhances RNA isolation and sensitivity of Cucumber mosaic
RT   virus detection by RT-PCR in black pepper";
RL   J. Virol. Methods 141(1):107-110(2007).
XX
RN   [2]
RP   1-657
RA   Bhat I., Sankaran H., Madhubala R.;
RT   "Coat protein gene sequence based characterization of Cucumber mosaic virus
RT   infecting black pepper (Piper nigrum L.) in India";
RL   Unpublished.
XX
RN   [3]
RP   1-657
RA   Bhat I.;
RT   ;
RL   Submitted (10-FEB-2004) to the INSDC.
RL   Plant Pathology, Indian Institute of Spices Research, Calicut, Kerala
RL   673012, India
XX
DR   MD5; 5a92919d0112c520249486a41d406bcc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..657
FT                   /organism="Cucumber mosaic virus"
FT                   /host="black pepper, Piper nigrum"
FT                   /mol_type="mRNA"
FT                   /country="India:Belur, Karnataka"
FT                   /db_xref="taxon:12305"
FT   CDS             1..657
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:Q6Q4B0"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q6Q4B0"
FT                   /protein_id="AAT12702.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADATFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVSAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSVMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 150 A; 170 C; 153 G; 184 T; 0 other;
     atggacaaat ctgaatcaac cagtgctggt cgcaaccgtc gacgtcgtcc gcgtcgcggt        60
     tcccgctccg cttcctcctc cgcggatgct acatttagag tcctgtcgca acagctttcg       120
     cgacttaata agacgttagc agctggtcgt cctactatta accacccaac ctttgtgggt       180
     agtgagcgct gtaaacctgg atacacgttc acatctatta ccctgaagcc tccgaaaata       240
     gacaaagggt cttattatgg taaaaggttg ttacttcctg attcagtcac tgagttcgat       300
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctact       360
     gtgtgggtga cagtccgtaa agttcctgcc tcctcggact tgtccgtttc cgccatctct       420
     gccatgtttg cggacggagc ctcaccagta ctggtttatc agtatgccgc gtccggagtc       480
     caagccaaca ataaattgtt gtacgatctt tcggtgatgc gcgctgatat tggtgacatg       540
     agaaagtacg ccgtgctcgt gtattcaaaa gacgatgcgc tcgagacgga tgaactagta       600
     cttcatgtcg acattgagca ccaacgtatt cccacttctg gggtgctccc agtttga          657
//