ID AY512585; SV 1; linear; genomic RNA; STD; VRL; 3602 BP. XX AC AY512585; XX DT 11-FEB-2004 (Rel. 78, Created) DT 11-FEB-2004 (Rel. 78, Last updated, Version 1) XX DE Rice ragged stunt virus nonstructural protein RRSV-P3 (RRSV-S3) gene, DE complete cds. XX KW . XX OS Rice ragged stunt virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus. XX RN [1] RP 1-3602 RA Shao C.G., Gong Z.X.; RT "Rice ragged stunt virus segment 3 of Philippines isolate, complete cds"; RL Unpublished. XX RN [2] RP 1-3602 RA Shao C.G., Gong Z.X.; RT ; RL Submitted (23-DEC-2003) to the INSDC. RL Key Lab of Proteomics, Institute of Biochemistry and Cell Biology, CAS, 320 RL Yue Yang Road, Shanghai 200031, China XX DR MD5; 52a2a66e1077338e8a17add74cfa6316. XX FH Key Location/Qualifiers FH FT source 1..3602 FT /organism="Rice ragged stunt virus" FT /segment="3" FT /mol_type="genomic RNA" FT /country="Philippines" FT /db_xref="taxon:42475" FT gene 1..3522 FT /gene="RRSV-S3" FT CDS 1..3522 FT /codon_start=1 FT /gene="RRSV-S3" FT /product="nonstructural protein RRSV-P3" FT /db_xref="UniProtKB/TrEMBL:Q6R5L5" FT /protein_id="AAS16479.1" FT /translation="MSNLPKPASHFEPEKNVDDKGNVTGSAPPVSKDTPTQQASVSLPN FT QEEPTQQTLVTTELPTKPDYNDLLLKASDERLLLVKEAKPQTLRFYASPTGLTASGFSI FT VTSPTSSYEQHAIDIFPYNCPVDKIVPAFTLEQIKITNDVLSSAQQSYLSRIPHDTSLV FT KLNEIEVVTGGSRELFSLGTGYVMVVPNAEFFEGANLKFVYGVPMADIIFSKLTSQSAA FT DYAFLDRSRIASGFIMFALHFALRTNVNLVVTKDNSARFASELSYSRPMSFVQGKKIVL FT PVQPHVCFAEGNSLMRYLDTALEGKYTQGVTYKYGRERIITETKDGGPITEITYLNIDN FT VTAQALGITAHVIGIDRYREDNVKRALLAYSLSGSTVDLMQSDESERMFGRMLSPQQEL FT SYLLVGAALSQDVYKTILRANLDAFMMFGTVMPSLSDSLAKIPADAGNQQIISLIRERQ FT SVSGFENAMEYLAMQVTPPLIWPCVISREVNVTGLSLLIMLLEYILFFIFYPSLAKKCG FT AGLCNNFYKLVFALSNSEWSQFVTRVGYDGTLGNSIPITDEDYWSNARRPALFTTDLSQ FT FRLLGLIQRLIAPIGEHREHVKAQAAEFPRLKARTEYWNPYPNPGAQHVEQTIFKARLL FT QAFDETLTLVKDLNQTGQLVSKTLMAGVAKVFNTCKIKLRYHGVGFGRDIGMPLAYLRD FT RKINFYHDYDGRLDTPFPNQMMLVSASQSPHDHKIPIELRRKGQIVLETGVVWTLVLGL FT QFPSHQFDEDMTNDPICKFRAPSPGEELGKDDTIIAMCANACVPFSIAAGIISESYADG FT GMKEIKELLSGSLSSTEFRNLISCIQTAMQGSGFNVGRNRDVFRQNETVDLRFIDPKVR FT YVENELTIIAPTPQDPPIIRGDLQLIPEGLMPRFRLGLTAIADSSSEYSRLRKGLYLAR FT CEVDVEAPNNALPLDLRDYVEVEYSHDLFQVRRIQTKQALGIFYQGEFYYRPALVPKML FT IVVNTSEEMEPSYQEFFMQCLEERRIVIKLPKMYFLSRIVCTHSIQRPDERDAVLGLLA FT VRNDQIPLVTFYDTEQVDPTIQFDGLASGSKSKFIWPISSIDQNVVVRALGASGSTAPI FT GFAAPTDSMCDSGSIDDVGNLTTGAGVLKDPRVISLTNGVINYTERANLTGRVLYRYRP FT AYALDSY" XX SQ Sequence 3602 BP; 971 A; 772 C; 843 G; 1016 T; 0 other; atgtcaaatc ttcccaaacc cgccagccac tttgaacctg aaaagaacgt tgatgacaaa 60 ggcaatgtaa ctggttctgc cccgccagtg agtaaggata ccccgactca acaagcatct 120 gttagtttgc ccaaccaaga agagccaaca caacagactt tggtcactac agagcttcca 180 actaaacctg actataatga cctgcttctc aaagctagtg atgagcgtct gttattggtt 240 aaagaagcta agcctcagac tcttcgtttt tatgccagcc caacaggttt aacagcgtca 300 ggattctcta ttgtaacgtc accgacgtcg agttatgagc agcacgctat tgacattttc 360 ccttacaact gtccggttga taagattgtg ccagcgttca cacttgaaca gatcaagatc 420 acgaacgacg ttctttcatc tgcccaacag tcctatctct ccaggatccc gcatgacacg 480 tcattggtaa agttgaatga aatcgaagtc gttactggag gtagtcgcga attgttttcg 540 ctcggaacag gatatgttat ggtggtacct aatgctgaat ttttcgaagg cgccaacttg 600 aaattcgttt acggagtacc catggccgac atcatctttt ccaagctgac gtctcaatca 660 gcggcagact atgcttttct tgatcgaagt cgtatcgctt ctggctttat tatgttcgcg 720 cttcattttg ccttacgtac aaacgttaac ctggtagtca cgaaagataa ctcggctcga 780 tttgcgtctg aacttagtta tagccgccca atgtcgtttg tgcaaggtaa gaagatcgtc 840 cttcctgtcc aaccacatgt ttgttttgct gagggcaatt ctttaatgcg atatctggat 900 accgctctag aaggaaaata cactcaaggt gtgacctaca aatatggacg tgagcgcatt 960 attactgaga ctaaagacgg tggacctatc acagaaataa cttacctgaa tatcgacaat 1020 gtcacagccc aagctcttgg aataacagcg cacgttatag gaattgatag gtatagagag 1080 gataatgtca aacgagcgtt gctagcgtat tcattatcag gaagtactgt cgacttaatg 1140 caatcagacg aatcggagag gatgtttgga cgcatgctat caccacagca ggaattgtct 1200 tatcttttag ttggtgctgc attaagccag gacgtttaca aaactatctt gcgtgctaat 1260 cttgacgcct ttatgatgtt tggaacggtg atgccgtcgc tatctgacag tttggcgaaa 1320 atacctgcag acgctggaaa tcaacagatt ataagcttga ttcgtgaacg acagtccgtc 1380 tcaggatttg agaacgcgat ggaatattta gctatgcaag tgactcctcc tctaatttgg 1440 ccctgtgtta tatcgagaga agttaacgtc actggcctat cattgctgat catgttgttg 1500 gaatatattc ttttctttat tttctatccg tcgttggcta agaaatgcgg tgctgggttg 1560 tgcaataatt tttacaagct tgtttttgct ctatcgaata gtgagtggtc gcagtttgtt 1620 acgagggttg gatatgatgg tactcttggt aattcaattc ccatcactga cgaagattat 1680 tggagtaatg ccagaagacc agctctcttc accaccgacc tctcccaatt cagactctta 1740 ggactgatac aacgattaat cgctccaatc ggcgaacatc gggaacatgt taaagctcaa 1800 gcagcggaat ttcctcgtct taaagctcgc actgaatatt ggaatcccta tcccaaccct 1860 ggcgcgcaac acgtcgaaca gacgatattc aaagctcgat tattgcaggc ttttgatgag 1920 acgttgacgc tggtgaaaga tctcaatcag actggtcagc tggtaagtaa gactttaatg 1980 gccggagttg ctaaagtttt caatacctgt aaaatcaagc tgcgatacca tggtgtcgga 2040 tttggacgtg acattggaat gcctctcgct tatctgcgcg atcgcaagat taacttctat 2100 catgattatg acggacgttt agatactcct tttcccaatc aaatgatgtt ggtgtctgca 2160 agccaaagtc cccacgacca caagataccg atcgaactaa gaaggaaggg acagatagta 2220 ttggaaacag gagtagtttg gacgctagta ttgggtctac aatttccttc acatcaattc 2280 gatgaggaca tgactaacga tccgatttgt aaatttcgag cgccaagtcc aggtgaagag 2340 ttaggcaagg atgatacgat aattgccatg tgtgctaacg cctgtgttcc ttttagtatt 2400 gctgcgggaa ttatctctga gtcttatgct gacggcggaa tgaaggaaat taaggagttg 2460 ctgtcgggat cgctatcttc aacagagttc cggaatttga tatcgtgcat ccagactgcg 2520 atgcaaggga gtggctttaa tgttggtaga aatagagatg tgttcagaca gaatgagacg 2580 gtagacttaa ggtttatcga tccgaaggtg cgttatgttg aaaacgaact gacgattatc 2640 gctcccactc cacaagatcc tcctataatt agaggtgatt tacaattgat tccagaggga 2700 ctgatgccgc gatttagact cggtttgact gccatcgccg acagctctag cgaatatagc 2760 cgtctgcgca aaggtttata tctagcacgg tgcgaagttg atgtcgaagc accaaacaac 2820 gcactaccat tggatctccg agactatgtc gaagttgagt actcgcacga cttgtttcag 2880 gtccgtagaa ttcaaacgaa acaagccctc ggaattttct atcaagggga attttactat 2940 cgtccggctt tagtcccgaa gatgctgatc gtcgtcaaca cgtcagaaga gatggaaccg 3000 tcatatcagg aattctttat gcagtgtctg gaagagcggc gcattgtaat caaactgccc 3060 aagatgtact ttcttagtcg gatagtatgt actcactcaa tacaaaggcc cgatgagaga 3120 gatgccgtgc tcggattgtt agcggtgaga aatgatcaga tacctctagt tactttctat 3180 gatactgagc aagttgatcc aacaattcaa tttgacggac tagcgtcagg atccaaaagt 3240 aagtttattt ggcctatttc gtccattgac caaaacgtcg tcgttcgagc gttaggtgcc 3300 agtggaagta ctgctcccat tggatttgct gctccgactg attcgatgtg cgatagtggt 3360 agtattgatg acgttggtaa cttgacgaca ggcgccggtg ttttgaagga tcccagggtt 3420 atcagtctca ctaacggcgt tatcaattac accgagcgag ccaatttaac tgggcgtgta 3480 ttgtatagat atcggcctgc ttacgctctc gattcttact agtagtggac gttttcttgg 3540 ggtggtacgt ggtcttgaca cgaggggcgt attgaaactg gtcttggcct atagggagga 3600 ga 3602 //