ID AY508994; SV 2; circular; genomic DNA; STD; VRL; 2543 BP. XX AC AY508994; XX DT 19-JAN-2004 (Rel. 78, Created) DT 29-JAN-2013 (Rel. 115, Last updated, Version 4) XX DE Tomato yellow margin leaf curl virus segment DNA B, complete sequence. XX KW . XX OS Tomato yellow margin leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2543 RX DOI; 10.1094/PD-90-0061. RX AGRICOLA; IND43786132. RA Nava A.R., Patte C.P., Hiebert E., Palston J.E.; RT "Detection and variability of begomoviruses in tomato from the Andean RT states of Venezuela"; RL Plant Dis. 90(1):61-66(2006). XX RN [2] RP 1-2543 RX DOI; 10.1007/s00705-012-1501-x. RX PUBMED; 23064695. RA Nava A., Londono A., Polston J.E.; RT "Characterization and distribution of tomato yellow margin leaf curl virus, RT a begomovirus from Venezuela"; RL Arch. Virol. 158(2):399-406(2013). XX RN [3] RP 1-2543 RA Nava A.R., Polston J.E., Hiebert E., Patte C.P.; RT ; RL Submitted (18-DEC-2003) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall, Gainesville, FL RL 32611-0680, USA XX RN [4] RC Sequence update by submitter RP 1-2543 RA Nava A.R., Polston J.E., Hiebert E., Patte C.P.; RT ; RL Submitted (14-SEP-2012) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall, Gainesville, FL RL 32611-0680, USA XX DR MD5; 9c13dd89141ca28c82d61ac9f7b29f21. XX CC On Sep 14, 2012 this sequence version replaced gi:40850604. XX FH Key Location/Qualifiers FH FT source 1..2543 FT /organism="Tomato yellow margin leaf curl virus" FT /segment="DNA B" FT /host="tomato, cv. Rio Grande" FT /isolate="virus 57" FT /mol_type="genomic DNA" FT /country="Venezuela:Merida" FT /db_xref="taxon:260909" FT gene 382..1155 FT /gene="nsp" FT CDS 382..1155 FT /codon_start=1 FT /gene="nsp" FT /product="NSP" FT /note="nuclear-shuttle protein" FT /db_xref="GOA:Q6R7Q6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q6R7Q6" FT /protein_id="AAR95979.1" FT /translation="MYPVRYKPDANNYKRRYYSRSNVFKRSSGVKRADGKRRATQQNKS FT HEEPKMSAQRIHENQYGPEFVMTHIYLLFPHILTTPIWVRLNLTRSRSYIKLKRLRFKG FT TVKIERVHADVAMDGLPPKIEGVFSLVIVVDRKPHLSPSGSLLTFDELFGARINSHGNL FT AIASSFKDRFYIRHVLKRVLSVEKDSTMVDLEGSTSLSNRRYNCWASFKDLDHDSCKGV FT YDNISKNALLIYYCWMSDVTSKASTFVSFDLDYVG" FT gene complement(1211..2092) FT /gene="mp" FT CDS complement(1211..2092) FT /codon_start=1 FT /gene="mp" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:Q6R7Q5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q6R7Q5" FT /protein_id="AAR95980.1" FT /translation="MESQLVNPPSAFNYIESHRDEYQLSHDLTEIILQFPSTAAQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDSNVHQRTHFAKFKGKLKISTAKHSVDIPFRAPTVKIHS FT KQFTENDVDFSHVDYGKWDRKLIRSTTMSRVGLKTPLELRPGESWASRSTIGMGHTDTD FT SELENAIHPYRHLNRLGSCTLDPGESASVIGEQRAQSNITMSMNQLNELVKATVHECIN FT NNCNPTPPKSLK" XX SQ Sequence 2543 BP; 709 A; 459 C; 525 G; 850 T; 0 other; accggatggc cgcgcgaatt tttggccctc cacgtgtcca gatgagcgcc tgcttattgg 60 tgatcccccc ctctctggaa ttggtccccc ccacttttga ccacttttga ccaatatttg 120 aattaaatgc gctcccccag tccgtacagt acacgtggcg caatctggtc catgcattaa 180 agcttagtca ttcactagga aaaagtttgt atatcccccc ccccaacttt gaatttgtcc 240 aggtttagtc cctcacatta tttatatata cgtggaccag tcataaccca tatgtgaagg 300 ctatttacta ttattcaaaa ttcaagttgc tctatttaaa ggacgttgtt gtcattttgg 360 agtagtatcc gatatcttaa tatgtatcca gttagatata aacctgatgc taataattat 420 aagaggagat attattcacg ttctaatgtg tttaagagat catctggtgt taaacgtgca 480 gatgggaaac gtagagctac ccaacaaaat aagtctcatg aagagcccaa gatgtcagcc 540 caacgtattc atgagaatca atatggacct gaatttgtaa tgactcatat atatctgcta 600 tttccacata tattaactac ccccatttgg gtaagattga acctaacccg aagcaggtcg 660 tatattaagt tgaaacgact caggtttaag ggaactgtta agattgaacg agtacatgct 720 gatgttgcca tggatggttt accccctaag attgaaggtg ttttttcact tgttattgtg 780 gtggatcgta aacctcattt gagtccttca ggatctctgc tcacatttga tgagttattt 840 ggtgcaagga ttaatagtca tggtaattta gcgatagctt cctccttcaa agacagattc 900 tacattcgtc atgtgttgaa gcgtgtttta tctgtggaga aggatagtac aatggtcgac 960 cttgaaggat caacgtcact ctctaatagg cgttataatt gttgggctag ttttaaggac 1020 ttagatcatg actcttgtaa gggtgtttat gataatataa gcaagaacgc cctattaatt 1080 tattattgtt ggatgtctga tgtcacttct aaggcatcta cctttgtatc atttgatctt 1140 gattatgttg gatgaataat aataagacat ttgctgaaat tgagtatata aaatacaata 1200 accaatatat ttatttcaat gactttggtg gtgttgggtt acaattattg ttaatacatt 1260 catggactgt tgccttaaca agttcgttaa gctggttcat tgacatggtg atgtttgatt 1320 gagccctttg ttcccctatc actgaagctg actctccagg gtctaatgtg caggacccca 1380 gtctgtttag atgtctgtat gggtgtattg cgttctccag ttcagagtct gtgtctgtat 1440 gacccattcc tatggtactt cttgatgccc atgattctcc tggtcttaat tccagtggag 1500 tctttaaccc aacccttgac attgttgtgg atcttatgag tttcctatcc catttcccgt 1560 agtccacgtg tgagaaatca acatcattct ctgtgaattg tttggaatga atcttcactg 1620 ttggtgcacg gaatgggatg tctacagagt gtttagctgt tgagatcttg agcttgcctt 1680 tgaatttggc aaagtgtgtt ctttgatgaa catttgagtc acacactctg tagtataact 1740 tccatggtat aggatcctta agagagaaga aggaagatga gaagtaatgg agatctatgt 1800 tacaacgtat agggaatgtc caggacgcct gtaatgattc attgtctgtc attctcttat 1860 catgtatctc cacaattaca gtccctgttg cgttaatcgg aacctgttgc ctgtattcta 1920 tgacacagtg gtctatcttc atacagctac gactgagtct tgctgttaat tgtgcagcag 1980 tggaaggaaa ctgcagaata atctctgtta ggtcatgaga taactggtat tcatctctat 2040 gagactctat gtaattaaaa gcactcggag gattaactag ctgagactcc atttagttta 2100 ttaggttgcg cagctaaatg cgttctggga atttagagag agaatattta tgagagaagt 2160 ttgaaggttt gatgaagata tgaagatatg catatgcctt gcccagttcc cccttttata 2220 gaaccctagc tcctcttaac atctgggttt ataaaatgca ctcaaatata ggatttataa 2280 cacgctaatt aaatgttaag gaattaaata ttgacttatt gaaggagaat atgaagggat 2340 atatataatt aatattggtt tgatatgata attatgagtt tctgcaatga gaagggataa 2400 ttgatggcag agtagtaaat atagccttgg acaccaaatt ggagtctctc aactctctct 2460 attgaatcgg tgtataaggg tcttatatat actataagcc tctataggct taatagacac 2520 gtgtaggcca tccgtataat att 2543 //