ID AY508991; SV 1; linear; genomic DNA; STD; VRL; 2560 BP. XX AC AY508991; XX DT 19-JAN-2004 (Rel. 78, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 3) XX DE Merremia mosaic virus segment DNA A, complete sequence. XX KW . XX OS Merremia mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2560 RX DOI; 10.1094/PD-90-0061. RX AGRICOLA; IND43786132. RA Nava A.R., Patte C.P., Hiebert E., Polston J.E.; RT "Detection and variability of begomoviruses in tomato from the Andean RT states of Venezuela"; RL Plant Dis. 90(1):61-66(2006). XX RN [2] RP 1-2560 RA Nava A.R., Polston J.E., Hiebert E., Patte C.P.; RT ; RL Submitted (18-DEC-2003) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall, Gainesville, FL RL 32611-0680, USA XX DR MD5; 54037646c89ae6f6ce496fc34779ae02. DR EuropePMC; PMC2894479; 20596296. XX FH Key Location/Qualifiers FH FT source 1..2560 FT /organism="Merremia mosaic virus" FT /segment="DNA A" FT /host="tomato, cv. Rio Grande" FT /mol_type="genomic DNA" FT /country="Venezuela:Trujillo" FT /db_xref="taxon:77813" FT gene 138..884 FT /gene="cp" FT CDS 138..884 FT /codon_start=1 FT /gene="cp" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:Q6R7R8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6R7R8" FT /protein_id="AAR95967.1" FT /translation="MVKRDAPWRLMAGTTKVSRSANFSPRGGMGPKAAAWVNRPMYRKP FT RIYRTLRGPDVPKGCEGPCKVQSLEQRHDISHVGKVICISDVTRGNGITHRVGKRFCVK FT SVYILGKIWMDENIKLKNHTNSVMFWLIRDRRPYGTPMDFGQVFNMYDNEPSTATVKND FT LRDRFQVLHRFYAKVTGGQYASNEQSLVRRFWKVNNYVVYNHQEAGKYENHTENALLLY FT MACTHASNPVYATLKIRSYFYDSISN" FT gene complement(881..1279) FT /gene="ren" FT CDS complement(881..1279) FT /codon_start=1 FT /gene="ren" FT /product="REn" FT /note="replication-enhancer protein" FT /db_xref="GOA:Q6R7R7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6R7R7" FT /protein_id="AAR95970.1" FT /translation="MDSRTGEPITAHQAMNGVFIWEVPNPLYFKIIQVEDPVYTTTRIY FT TIQIRFNYNLRKALNLHKAYLNFQIWTTLVQASGTTYLNRFRDRVLLYLDQLGVVSLNN FT VIRAVRFATDKPYVNCVLERHSIKFNLY" FT gene complement(1026..1421) FT /gene="trap" FT CDS complement(1026..1421) FT /codon_start=1 FT /gene="trap" FT /product="TrAP" FT /note="transcriptional-activator protein" FT /db_xref="GOA:Q6R7R6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6R7R6" FT /protein_id="AAR95969.1" FT /translation="MQNSSSSTPPSIKPQHRRAKRARATIRRRRLDLDCGCSVYVHINC FT RNHGFTHRGTHHCSSSNEWRFYLGGSKSPLFQDNPSGGPSIHNDQNLHHPNPVQLQPEE FT GVESTQGLPEFPNLDDISSSFWDDIFK" FT gene complement(1342..2418) FT /gene="rep" FT CDS complement(1342..2418) FT /codon_start=1 FT /gene="rep" FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:Q6R7R5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6R7R5" FT /protein_id="AAR95968.1" FT /translation="MPRKGSFSIKAKNYFLTYPHCSLPKEEALCQIKALQTPVNKKFIK FT ICRELHENGEPHLHVLIQFEGKYNCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTIQRGQFQIDGRSARGGQQSANDTYAKALNAASAEEALQIIKEEQPQHFFLQHH FT NLVANATRIFHKSPEPWVPPFQLSSFTNVPDEMQEWADDYFGRGAAARAERPISIIIEG FT DSRTGKTMWARSLGKHNYLSGHLDFNNRVYSNDVEYNVTDDISPNYLKLKHWKELIGAQ FT RDWQTNCKYGKPVQIKGGIPSIVLCNPGEGTSYKNFLDKEENASLRAWSLHNAKFIFLN FT SPLYQTTAQESEESQGDH" FT gene complement(2004..2261) FT /gene="ac4" FT CDS complement(2004..2261) FT /codon_start=1 FT /gene="ac4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6R7R4" FT /protein_id="AAR95971.1" FT /translation="MGNLISTCLSNSRENTTARITDSSTWYPQPGQHISIRTFRELNPA FT PMSSPTSTRTEIQFNGDNSRSTEDLLEEVSNLLTIRMPRR" XX SQ Sequence 2560 BP; 632 A; 538 C; 603 G; 787 T; 0 other; atggccgccc gccgcgcccc ccctgggccc cactgattaa agccgtccaa tcagaatgcg 60 cctaggaagt ctaaatattt aaattaactc tataaataca ttggagtccg actatacccc 120 accaccttta atttaaaatg gttaagaggg acgccccatg gcgcttaatg gcggggacca 180 ctaaagtgag tcgctccgca aatttctcgc cccgtggagg tatgggccct aaagctgctg 240 cctgggttaa caggcccatg tacaggaagc ccagaattta tcgcacactg agagggcctg 300 atgttcccaa aggttgtgaa ggcccatgta aggtacagtc tcttgagcag cgtcacgata 360 tttctcatgt tggtaaggta atctgtatat ccgatgttac tcgtggtaac ggtattactc 420 accgtgttgg caagcgtttc tgtgtgaagt ctgtgtatat tctaggtaaa atatggatgg 480 atgagaacat taagctgaag aaccacacga acagtgtgat gttttggctg attcgtgata 540 ggagaccgta tggcacgcct atggattttg gtcaggtgtt caacatgtat gacaacgagc 600 ccagtactgc caccgtcaag aacgatctcc gtgatcgatt tcaagtgctg cacaggtttt 660 atgccaaagt aacaggtggt cagtatgcca gtaacgagca gtcattggtt cgtcggtttt 720 ggaaggttaa taactacgtc gtgtataacc atcaggaagc aggaaaatac gagaatcata 780 cggagaacgc tttgttattg tatatggcat gtacacacgc ctctaatcct gtatatgcta 840 cgttgaaaat acgtagttat ttttatgact ctatttcgaa ttaataaagg ttaaatttta 900 ttgaatgtct ctctagcaca caatttacat atggtttgtc cgttgcgaaa cgaactgctc 960 taattacatt gttaagtgaa acaaccccta attgatctaa atacagtaac actctatccc 1020 taaatctatt taaatatgtc gtcccagaag cttgaactaa tgtcgtccag atttggaaat 1080 tcaggtaggc cttgtgtaga ttcaacgcct tcctcaggtt gtagttgaac cggatttgga 1140 tggtgtagat tctggtcgtt gtgtatactg ggtcctccac ttggattatc ttgaaataga 1200 ggggatttgg aacctcccaa ataaaaacgc cattcattgc ttgatgagca gtgatgggtt 1260 cccctgtgcg tgaatccatg gtttctgcag ttgatgtgta cgtaaaccga acagccacag 1320 tctaagtcga gtcttctacg tctaatggtc gccctggctc tcttcgctct cctgtgctgt 1380 ggtttgatag aggggggagt tgaggaagat gaattttgca ttgtgtagtg accacgctct 1440 gagagatgca ttctcctctt tatcgaggaa gtttttatag ctagtcccct cacctggatt 1500 gcacagcacg attgacggga ttccaccttt aatttgaact ggctttccgt atttgcaatt 1560 ggtttgccag tccctttggg cccctatcaa ttctttccaa tgctttaatt tcaaataatt 1620 agggcttatg tcatcagtga cgttatattc cacgtcatta gaatataccc tattattaaa 1680 atcaagatgg ccacttagat agttatgttt acctaatgac ctggcccaca ttgtctttcc 1740 ggttcgacta tcgccttcta tgatgatact gatcggtctt tctgcccgcg cagcggcacc 1800 ccttccaaaa taatcgtcag cccattcctg catctcatct ggaacgtttg tgaaggagga 1860 gagttgaaac ggaggaaccc atggttctgg agacttgtga aatattctgg ttgcgtttgc 1920 gacaaggttg tgatgttgaa ggaagaagtg ttgcggttgt tcttccttta ttatttgcag 1980 tgcttcctca gcggacgctg cgtttaacgc cttggcatac gtatcgttag cagattgctg 2040 acctcctcta gcagatcttc cgtcgatctg gaattgtccc cgttgaattg tatctccgtc 2100 cttgtcgatg taggacttga catcggagct ggatttagct ccctgaatgt tcggatggaa 2160 atgtgttgac ctggttgggg ataccaagtc gaagaatctg ttattcgtgc agttgtattt 2220 tccctcgaat tggataagca cgtggagatg aggttcccca ttttcgtgaa gctctctgca 2280 gattttgatg aacttcttgt ttactggtgt ctgaagagct ttgatttggc agagggcttc 2340 ttctttgggt aatgaacaat gtgggtatgt aaggaaatag tttttggctt ttattgagaa 2400 tgaacccttc cgtggcattt tggtaatatg agaggtgttc ccccaattgc tcagctctca 2460 aaactctata tgaatcgggg gaactggggg tacatttata gtagaactct cattctatgg 2520 atttgcaaca cgtggcggcc atccgctata atattaccgg 2560 //