ID   AY508411; SV 1; linear; genomic RNA; STD; VRL; 1070 BP.
XX
AC   AY508411;
XX
DT   10-JAN-2004 (Rel. 78, Created)
DT   22-MAY-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Pepino mosaic virus strain US3 triple gene block protein 3 (TGB3) and coat
DE   protein (CP) genes, complete cds; and 3' UTR.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1070
RX   DOI; 10.1007/s00705-005-0495-z.
RX   PUBMED; 15750864.
RA   Maroon-Lango C.J., Guaragna M.A., Jordan R.L., Hammond J., Bandla M.,
RA   Marquardt S.;
RT   "Two unique US isolates of Pepino mosaic virus from a limited source of
RT   pooled tomato tissue are distinct from a third (European-like) US isolate";
RL   Arch. Virol. 150(6):1187-1201(2005).
XX
RN   [2]
RP   1-1070
RA   Maroon-Lango C.J., Guaragna M.A., Jordan R.L., Hammond J., Bandla M.,
RA   Marquardt S.;
RT   ;
RL   Submitted (17-DEC-2003) to the INSDC.
RL   Floral and Nursery Plants Research Unit, US National Arboretum, USDA-ARS,
RL   10300 Baltimore Ave, Beltsville, MD 20705, USA
XX
DR   MD5; 57123dd90b2beac0d19b92272130f042.
DR   EuropePMC; PMC3132167; 21702943.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1070
FT                   /organism="Pepino mosaic virus"
FT                   /strain="US3"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="MD"
FT                   /db_xref="taxon:112229"
FT   gene            1..255
FT                   /gene="TGB3"
FT                   /note="ORF 4"
FT   CDS             1..255
FT                   /codon_start=1
FT                   /gene="TGB3"
FT                   /product="triple gene block protein 3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q6R893"
FT                   /protein_id="AAR88083.1"
FT                   /translation="MSSYSSSFLHWVLSSPINLVLALVVLLTSILAITHLQQPTIHNHC
FT                   QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
FT   gene            294..1007
FT                   /gene="CP"
FT                   /note="ORF 5"
FT   CDS             294..1007
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8JJF2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJF2"
FT                   /protein_id="AAR88084.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
FT   3'UTR           1008..1070
XX
SQ   Sequence 1070 BP; 309 A; 282 C; 197 G; 282 T; 0 other;
     atgtcctcat actcatcttc attcttacat tgggtattgt cctcaccaat aaatttagtt        60
     ttagctttag tcgtactact caccagcatt cttgctataa cacaccttca gcaaccaaca       120
     atacacaacc attgtcaggt catcattgac ggtgctgcaa tagtcataac aaattgtgag       180
     aacacaccag aagtgcttaa agcaatcaac ttctcccctt ggaacgggtt aagttttcct       240
     aaatttgaaa attaatattg agtgttcaca aaaatcaact tcaataaaca atcatgcctg       300
     acacaacacc tgttgctgcc acttcaagtg caccacccac agccaaagat gctggtgcca       360
     aagctccttc tgacttctca aatcccaata cagctcctag tctcagtgat ttgaagaaag       420
     tcaagtatgt ctccaccgtg acctccgtgg ccacaccagc tgaaattgaa gccctaggca       480
     aaatcttcac cgctatgggc cttgccgcca atgagactgg tccggccatg tgggatctag       540
     ctcgtgcata tgctgatgtg cagagttcta aatcggcaca gctgattgga gctacccctt       600
     ccaaccctgc actatcacgc cgagcccttg ctgctcagtt tgatcgaatc aatataaccc       660
     ccaggcaatt ttgcatgtac tttgccaaag ttgtttggaa catacttctc gacagcaaca       720
     ttccaccagc aaattgggcc aaacttggtt accaagaaga tacaaaattt gctgcatttg       780
     acttcttcga tggagtcacc aaccctgcca gcctgcagcc tgctgatggt cttatcaggc       840
     agccaaatga gaaagaacta gctgctcact ccgtagctaa gtacggcgcc ttggctaggc       900
     aaaagatctc cacaggtaat tatattacca cacttggaga agtcacacgt ggacacatgg       960
     gaggagctaa caccatgtac gcgatagacg cacccccaga actttaaaca ctcgaaactt      1020
     aatcagagtg gggttttcta cagtttattt acctaattat ttctttgaat                 1070
//