ID AY502936; SV 1; circular; genomic DNA; STD; VRL; 2773 BP. XX AC AY502936; XX DT 15-JAN-2004 (Rel. 78, Created) DT 26-MAR-2008 (Rel. 95, Last updated, Version 2) XX DE Tomato leaf curl Mali virus, complete genome. XX KW . XX OS Tomato leaf curl Mali virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2773 RX DOI; 10.1007/s00705-008-0042-9. RX PUBMED; 18278427. RA Zhou Y.C., Noussourou M., Kon T., Rojas M.R., Jiang H., Chen L.F., RA Gamby K., Foster R., Gilbertson R.L.; RT "Evidence of local evolution of tomato-infecting begomovirus species in RT West Africa: characterization of tomato leaf curl Mali virus and tomato RT yellow leaf crumple virus from Mali"; RL Arch. Virol. 153(4):693-706(2008). XX RN [2] RP 1-2773 RA Zhou Y., Jiang H., Chen L., Gilbertson R.L.; RT "Characterization of tomato-infecting begomoviruses (genus begomovirus, RT family geminiviridae) from Mali, Africa"; RL Unpublished. XX RN [3] RP 1-2773 RA Zhou Y., Jiang H., Chen L., Gilbertson R.L.; RT ; RL Submitted (15-DEC-2003) to the INSDC. RL Plant Pathology Department, UC-Davis, One Shields Avenue, Davis, CA 95616, RL USA XX DR MD5; 6c6a98b81143f3f837f58628d68bc638. XX FH Key Location/Qualifiers FH FT source 1..2773 FT /organism="Tomato leaf curl Mali virus" FT /mol_type="genomic DNA" FT /country="Mali" FT /db_xref="taxon:260379" FT gene 138..488 FT /gene="V1" FT CDS 138..488 FT /codon_start=1 FT /gene="V1" FT /product="pre-coat protein" FT /db_xref="GOA:Q6RCU4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6RCU4" FT /protein_id="AAR89447.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAIEETYEPNTLGYDLIRDL FT ISVVRASNYVEATRRYIHFHSRLEGSSKTELRQPILQPCCCPHCPRHKQASTMDVPAHV FT PKAQVLQNVQKS" FT gene 298..1074 FT /gene="V2" FT CDS 298..1074 FT /codon_start=1 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:Q6RCU3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6RCU3" FT /protein_id="AAR89448.1" FT /translation="MLKRPADIFISTPASKVRRKLNFDSPYSSRAVVPTVRGTSKRQLW FT TYRPMYRKPKFYKMYRSPDVPRGCEGPCKIQSYEQRDDVKHTGIVRCVSDITRGPGLTH FT RTGKRFCIKSMYILGKIWMDENIKKTNHTNNVMFYLVRDRRPYGKSPMDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVTGGPSGVKEQALVKRFYRLNSHVVYNHQEEAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1071..1475) FT /gene="C3" FT CDS complement(1071..1475) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q6RCU2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6RCU2" FT /protein_id="AAR89449.1" FT /translation="MDLRTGEHITALQAQSGVFIWELNNPLYFKIIKHISRPFNRNHDM FT ISDQIRFNHNLRKELGIHKCYLNFQIWTTLRPQTGHFLRVFKTQIIKYLDNLNVISINN FT IIRAVNHVLYNILENIIDVSENHEIKFNIY" FT gene complement(1216..1623) FT /gene="C2" FT CDS complement(1216..1623) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q6RCU1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6RCU1" FT /protein_id="AAR89450.1" FT /translation="MRPSSPSQSHCSPTPIKVLHKQAKKKPIRRRRVDLNCGCSYYLHI FT NCTNHGFTHRGTHHCSSSSEWRVYLGAQQSPIFQDNKTHQPTIQQEPRHDIRPNQVQPQ FT PQERVGDSQVLSELPDLDDLTASDWSFLKGL" FT gene complement(1532..2611) FT /gene="C1" FT CDS complement(1532..2611) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein C1" FT /db_xref="GOA:Q6RCU0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6RCU0" FT /protein_id="AAR89451.1" FT /translation="MPRAGRFSIKAKNYFLTYPQCSLTKKEALSQLQNLQTPTNKKFIK FT ICRELHEDGEHHLHVLIQFEGKYNCTNQRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGCQTANDAAAEALNAGSTEAALAIIKEKLPKDYIFQYH FT NLKSNLDRIFQEPPEVYVSPFSSSSFTQVPDELEEWVADNIRDSAARPWRPKSIVLEGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKELMGAQRDW FT QSNTKYGKPVQIKGGIPSIFLCNPGATSSYKEFLDEEKNRALKAWAVKNATFVTLTEPL FT FSNANQGSPQTSQEETDQA" FT gene complement(2197..2454) FT /gene="C4" FT CDS complement(2197..2454) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6RCT9" FT /protein_id="AAR89452.1" FT /translation="MGNIISTCLSNSRVNTTAQINDSSTWYPQPGQHISIRMYRELNPA FT PTSSPISIRTETLSNGENSKLTADLLEEAAKQLTTQPPRH" XX SQ Sequence 2773 BP; 754 A; 533 C; 630 G; 856 T; 0 other; acaggatggc cgcgcccgaa aaagaaagtg gtccctcctc actaatttat gtcggccaat 60 cagaatgtca gtgaaaacgt tagataagta gtgttttgtc ttatatactt tggtcccaag 120 tatgttacag ttgcactatg tgggatccat tattgaatga attccctgaa tcagtacatg 180 ggtttcgatg tatgctggcc ataaaatatt tgcaggccat agaggaaaca tacgagccca 240 atacattggg ttacgattta attcgtgatc tcatatcagt agttagggcc tccaactatg 300 ttgaagcgac ccgccgatat attcatttcc actcccgcct cgaaggttcg tcgaaaactg 360 aacttcgaca gcccatactc cagccgtgct gttgtcccca ctgtccgagg cacaagcaag 420 cgtcaactat ggacgtaccg gcccatgtac cgaaagccca agttttacaa aatgtacaga 480 agtcctgatg taccacgggg atgtgaaggt ccatgtaaga tccagtcgta tgagcaaagg 540 gatgacgtga agcataccgg tattgtacgt tgtgttagtg atataactcg tggtcctggt 600 ttgactcata gaacagggaa gagattctgt atcaagtcca tgtatatatt gggtaagatt 660 tggatggatg agaacattaa gaagacgaat cacactaaca atgtcatgtt ctacttggtc 720 cgtgatagaa ggccctatgg aaaaagccca atggattttg gacaggtttt caatatgttt 780 gacaatgagc ccagtactgc cactgtgaag aatgatctcc gtgatagata tcaagtactt 840 aggaagtttc atgctaccgt tacgggtgga ccctctggag tgaaggaaca ggcattagtg 900 aaaagatttt ataggcttaa tagtcatgta gtgtataacc atcaggaaga ggctaaatat 960 gagaatcata cagagaatgc gttgttattg tatatggcat gtactcatgc ttctaaccca 1020 gtgtatgcta cccttaaaat acgcatctat ttctatgatg cagttacgaa ttaataaata 1080 ttaaatttta tttcatgatt ttctgataca tcaataatgt tttcaagaat attgtacaat 1140 acatggttga ctgccctaat gatattatta atagaaatta cattcaaatt atctaaatat 1200 ttaattattt gggtcttaaa gacccttaag aaatgaccag tctgaggccg taaggtcgtc 1260 cagatctgga agttcagata acacttgtga atccccaact ctttcctgag gttgtggttg 1320 aacctgattt ggtctgatat catgtcgtgg ttcctgttga atggtcggct gatgtgtttt 1380 attatcttga aatatagggg attgttgagc tcccagataa acacgccact ctgagcttga 1440 agagcagtga tgtgttcccc tgtgcgtaaa tccatggttg gtgcagttaa tgtgtagata 1500 gtatgagcac ccgcagttga ggtctactcg tctacgcctg atcggtttct tcttggcttg 1560 tttgtggaga accttgattg gcgttggaga acaatggctc tgtgagggtg acgaaggtcg 1620 cattttttac tgcccaagcc ttcagtgctc tgtttttttc ctcgtctaga aattccttat 1680 atgatgaagt tgcccctgga ttgcagagga aaatactggg aatgccccct ttaatttgaa 1740 ctggctttcc gtattttgtg ttgctttgcc agtctctttg ggcccccatc agctctttaa 1800 aatgctttaa ataatgtggg tcgacatcat caatgacgtt ataccatgcg ttattggagt 1860 acacctttgg gcttaagtct aggtgcccac ataaataatt atgtggaccc agagaacggg 1920 cccatacagt tttgccggtc cgactgtcac cctctaagac tatactcttg ggtctccatg 1980 gccgcgcagc ggaatctctt atattatctg ccacccactc ttcaagttcg tctggaactt 2040 gagtaaaaga agaagaagaa aaaggggata catatacttc aggaggttcc tggaagattc 2100 tatctaaatt ggattttaaa ttatgatatt gaaatatata atcttttggg agtttttctt 2160 taattatagc taaagcagct tcagttgaac ctgcatttaa tgcctcggcg gctgcgtcgt 2220 tagctgtttg gcagcctcct ctagcagatc tgccgtcaat ttggaattct ccccattcga 2280 gagtgtctcc gtccttatcg atataggact tgacgtcgga gctggattta gctccctgta 2340 cattcggatg gaaatgtgct gaccgggttg gggataccag gtcgaagaat cgttgatttg 2400 tgcagttgta tttaccctcg aattggataa gcacgtggag atgatgttcc ccatcttcgt 2460 ggagttctct acagatttta atgaattttt tatttgtggg agtctgtagg ttctgtaatt 2520 gagaaagtgc ctctttttta gtaagagagc attggggata agtgaggaag taattcttgg 2580 ctttaatact aaaacgaccg gctctaggca tagtgataaa tgaattgggg ggcactaaaa 2640 gtcatatgaa ttgggggaac tggggggcaa tttatatgtg ccccccaaat ggcataactg 2700 taatatcgta aacctttaag tctcattaga aatccaaatt ccatttaaat ctagcggcca 2760 tccttctaat att 2773 //