ID   AY459606; SV 1; linear; genomic RNA; STD; VRL; 1744 BP.
XX
AC   AY459606;
XX
DT   01-DEC-2004 (Rel. 82, Created)
DT   11-MAR-2007 (Rel. 91, Last updated, Version 3)
XX
DE   Sweet potato virus Y isolate MD2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sweet potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1744
RX   DOI; 10.1007/s00705-006-0879-8.
RX   PUBMED; 17136503.
RA   Ateka E.M., Barg E., Njeru R.W., Thompson G., Vetten H.J.;
RT   "Biological and molecular variability among geographically diverse isolates
RT   of sweet potato virus 2";
RL   Arch. Virol. 152(3):479-488(2007).
XX
RN   [2]
RP   1-1744
RA   Ateka E.M., Barg E., Njeru R.W., Thompson G., Vetten H.J.;
RT   ;
RL   Submitted (06-NOV-2003) to the INSDC.
RL   Institute for Plant Virology, Microbiology and Biosafety, Federal
RL   Biological Research Center for Agriculture and Forestry, Messeweg 11/12,
RL   Braunschweig 38104, Germany
XX
DR   MD5; 4fdc3d404dd67f4221b5c6be41b9ca7a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1744
FT                   /organism="Sweet potato virus Y"
FT                   /isolate="MD2"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:225962"
FT   CDS             <1..1623
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5QIX2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q5QIX2"
FT                   /protein_id="AAS37686.1"
FT                   /translation="STVVDNTLMVVLAMTYSLCKLNIKPEDHEKICVFYANGDDLLIAI
FT                   DPQYEWILDSLEKLFRELGLNYDFSSRTYNKEELWFMSHRGIKRDGIFIPKLEPERIVS
FT                   ILEWDRSHEPIHRLEAICAAMVEAWGYDELLQHIRKFYAWVLDQAPYSELARTGKAPYI
FT                   AETALRVLYTCVEPSIEDLSEYSRVLSLMYDDDVNFGNHEPVYHQSGAEEVKDAGTPPP
FT                   SKSGKTRVTQTQPLKAPEGTVDPRDPPPPIVEEIVEEETPAQKALREARGKQPATQPSY
FT                   TYGRDTGPRSPRQVTTTSGVRDRDVNAGTVGTFTVPRLQITSSKKRLPIVDGRPVINLD
FT                   HLAVYDPEQTNLANTRSTQEQFKAWYEGVKGDYGVSDAEMGILLNGLMVWCIENGTSPN
FT                   INGMWVMMDGEEQVTYPIKPLLDHAVPTFRQIMTHFSDIAEAYIEKRNRIKAYMPRYGL
FT                   QRNLTDMSLARYAFDFYELHSNTPVRAREAHMQMKAAALKNAQNRLFGLDGNVSTQEED
FT                   TERHTTTDVTRNIHNLLGMRGVQ"
FT   mat_peptide     <1..624
FT                   /product="NIb protein"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   mat_peptide     625..1620
FT                   /product="coat protein"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   3'UTR           1624..1744
XX
SQ   Sequence 1744 BP; 570 A; 334 C; 401 G; 439 T; 0 other;
     tctacagttg ttgataacac actgatggtc gtattggcca tgacctactc tctctgcaag        60
     ctcaacataa aacctgagga tcatgaaaag atttgcgtct tttacgcaaa tggtgacgat       120
     ttattgatcg caattgatcc gcaatatgaa tggattctcg attctttaga aaagctattc       180
     agggaactag gtctcaatta cgacttctca tcaagaactt ataataagga agaactctgg       240
     tttatgtcgc atagaggaat aaagagagat ggaattttta taccaaagtt ggaaccagag       300
     aggattgtct caattcttga atgggaccgt tcacacgagc caattcatag attggaggct       360
     atttgtgctg caatggttga ggcatggggt tatgacgaac tattacaaca tataaggaag       420
     ttctatgcat gggttttgga tcaggcacca tacagtgagt tagcaagaac aggcaaggca       480
     ccatacattg ctgaaactgc tctgagagta ctatacactt gtgtcgaacc ctcaattgag       540
     gatttatctg aatactcacg agttttgagc cttatgtatg atgatgacgt gaattttggc       600
     aatcatgaac ctgtttacca tcaatcagga gctgaagaag taaaggatgc aggaacccca       660
     cctccatcta agtctggtaa gacaagagtc acacaaacac aaccactgaa agcgccagag       720
     ggaactgttg atcctcgaga tccaccacca ccaattgttg aagaaattgt tgaagaagaa       780
     acaccagcac aaaaagcatt gagggaagcc cgtggcaagc aaccagcaac acaaccctca       840
     tacacttatg ggcgagacac aggaccacgt agcccaaggc aagttacaac aacaagtgga       900
     gttagggata gagatgtcaa tgctggaaca gtagggacgt ttacagttcc aagacttcaa       960
     attacatcaa gcaagaagag attgccaata gttgacggac gtccggtaat caacctggat      1020
     cacttggcag tctacgatcc agagcaaaca aatcttgcaa ataccagatc aacacaggaa      1080
     cagtttaagg catggtatga aggtgtgaag ggtgattatg gggtatctga tgctgaaatg      1140
     ggcatactcc ttaatggcct catggtttgg tgtattgaga atggtacatc acccaatatt      1200
     aatggaatgt gggtgatgat ggacggagaa gaacaagtaa cttatccaat aaaacctcta      1260
     ttggatcatg ctgtccccac atttagacag ataatgacac acttcagcga catagctgaa      1320
     gcgtacattg aaaagagaaa caggataaag gcctatatgc caaggtatgg cctacagagg      1380
     aatttgactg atatgagtct tgcgcggtat gcatttgatt tctatgaact ccactcaaac      1440
     acaccagtga gagcaagaga ggcacatatg caaatgaaag cagcagcttt aaagaatgca      1500
     cagaaccgcc tgtttggttt ggatggaaac gtctccacgc aagaagaaga cacggagagg      1560
     catacaacaa ctgatgttac aagaaatata cataacctgt taggaatgag aggtgtgcag      1620
     taaacaatat attgctcgta cttttaattt cagttggtct ttaatttaaa ttcgtgtctt      1680
     tcagtcccga agagtgttgg ttgtgtgtag tgactatgtg tggttatacc accgttgcta      1740
     cata                                                                   1744
//