ID AY456683; SV 1; circular; genomic DNA; STD; VRL; 2758 BP. XX AC AY456683; XX DT 01-JUN-2004 (Rel. 80, Created) DT 08-DEC-2005 (Rel. 86, Last updated, Version 6) XX DE Cotton leaf curl Kokhran virus-Dabawali segment A, complete sequence. XX KW . XX OS Cotton leaf curl Kokhran virus-Dabawali OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2758 RX PUBMED; 15669112. RA Kirthi N., Priyadarshini C.G., Sharma P., Maiya S.P., Hemalatha V., RA Sivaraman P., Dhawan P., Rishi N., Savithri H.S.; RT "Genetic variability of begomoviruses associated with cotton leaf curl RT disease originating from India"; RL Arch. Virol. 149(10):2047-2057(2004). XX RN [2] RP 1-2758 RA Kirthi N., Hemalatha, Rishi N., Savithri H.S.; RT ; RL Submitted (03-NOV-2003) to the INSDC. RL Biochemistry, Indian Institute of Science, Malleswaram, Bangalore, RL Karnataka 560012, India XX DR MD5; db3a27dffaccd62b558f96c4061bb1b6. XX FH Key Location/Qualifiers FH FT source 1..2758 FT /organism="Cotton leaf curl Kokhran virus-Dabawali" FT /segment="A" FT /mol_type="genomic DNA" FT /country="India:Dabwali district, Sirsa, Harayana" FT /isolation_source="leaves" FT /db_xref="taxon:273794" FT gene 144..500 FT /gene="AV2" FT CDS 144..500 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:Q6JIB8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6JIB8" FT /protein_id="AAS55093.1" FT /translation="MWDPLLNEFPDTVLGFRCMLAIRYLQLVENAYSPDSLGYDLIRDL FT ISVVRAKSYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT gene 304..1074 FT /gene="AV1" FT CDS 304..1074 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /db_xref="GOA:Q6JIB7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6JIB7" FT /protein_id="AAS55092.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHNIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1071..1475) FT /gene="AC3" FT CDS complement(1071..1475) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q6JIB6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6JIB6" FT /protein_id="AAS55096.1" FT /translation="MDSRTGEPITAAQAENGVFIWEIQNPLYFKITEHHNRPFLMNRDI FT ITVQIRFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWKVLQHVVFVDQSSSIKFNIY" FT gene complement(1216..1620) FT /gene="AC2" FT CDS complement(1216..1620) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional enhancer protein" FT /db_xref="GOA:Q6JIB5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6JIB5" FT /protein_id="AAS55095.1" FT /translation="MQSSSPSRAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRAPQSTIPNEQRHHHRADTVQSQP FT EESVGDTQMFHSFPNLDDLTASDWSFLKGL" FT gene complement(1523..2605) FT /gene="AC1" FT CDS complement(1523..2605) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q6JIB4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6JIB4" FT /protein_id="AAS55094.1" FT /translation="MHPKRFXINSKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIKI FT CRELHENGEPHIHVLIQFEGKYQCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIE FT KDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNANLDKIFQEPPAPYVSPFSSSSFDQVPEELEVWAAENVVSAAARANRPISVVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPRVYSNDAWFNVIDDVDPHYLKHFKEFMGAQKDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNAIFITLESPLY FT SGSNQSAAQASQEGDQTSES" FT gene complement(2149..2451) FT /gene="AC4" FT CDS complement(2149..2451) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6JIB3" FT /protein_id="AAS55097.1" FT /translation="MGNLIFTCSSSSKGSTSARIRDSSTWSPQAGQHISIRTYRELNPA FT PTSNPTSRRTGTFSTGGNFRSTEGQQEEGNRQPMTLMPQHLTREVSRRLLESLRN" XX SQ Sequence 2758 BP; 732 A; 576 C; 631 G; 817 T; 2 other; accggatggc cgcgcgattc ttttgtgggt cccgccacta actcttgtct gccaatcaca 60 tggcgcggct caaagcttaa ataaagctta aataattctc ccgcttatta taagtacttc 120 gttgctaagt atgcgtttga aaaatgtggg atccactgtt aaatgagttc cccgacaccg 180 tactcggatt caggtgtatg cttgctataa gatacctgca gttggtagaa aatgcgtatt 240 cccccgattc gttgggatac gacctaatac gtgatttaat ttctgtcgtc agggccaaaa 300 gctatgtcga agcgaccagc agatataatc atttccacgc ccgcttcgaa ggtacgccgc 360 cgtctcaact tcgacagccc atatgtgagc cgtgctgctg cccccattgt ccgcgtcacc 420 aaagcaaaag catgggcgaa caggcccatg aacagaaagc ccaggatgta caggatgtac 480 agaagtccag atgttcctag aggatgtgaa ggtccatgta aggttcagtc gtttgagtcc 540 agacataata ttcagcatat aggtaaagta atgtgtgtta gtgatgttac tcgtggtact 600 gggctgaccc atagagttgg taagagattt tgtgttaagt ctgtttatgt gttgggtaag 660 atctggatgg atgagaacat taagacgaag aatcacacga atagtgtgat gtttttcttg 720 gttagagatc gtagacctgt tgataaacct caagattttg gagaggtatt taatatgttt 780 gataatgagc ccagtacggc gactgtgaag aatgttcatc gtgataggta tcaagttctg 840 cgcaaatggt atgcaactgt caccggtgga caatacgctt caaaggaaca agctctcgtg 900 aagaaattta ttagagttaa taattatgtt gtgtataacc agcaggaagc tggcaagtat 960 gagaatcatt ctgagaatgc tttaatgttg tatatggcgt gtactcacgc ctctaaccca 1020 gtgtatgcta ccttgaagat acggatctac ttctatgatt ccgtgacaaa ttaataaata 1080 ttgaatttta ttgaagatga ttggtctaca aatacaacat gttgtaatac tttccataat 1140 acatgatcaa ctgctctaac tacattatta atactgacaa ttcctaagtt atttaaatat 1200 ttaagcactt gagtcctaaa gacccttaag aaacgaccag tcggaggctg tgaggtcatc 1260 cagattcgga aagctatgaa acatttgtgt atccccaacg ctttcctcag gttgtgattg 1320 aaccgtatct gcacggtgat gatgtctctg ttcattagga atggtcgatt gtggtgctct 1380 gttatcttga aatacagggg attttgaatc tcccagataa acacgccatt ctctgcttga 1440 gctgcagtga tgggttcccc tgtgcgtgaa tccatggttg tggcaggcta atgctatgaa 1500 gtacgaacac ccacaaggga gatcaactct ccgacgtctg gtccccttct tggctagcct 1560 gtgctgcact ttgattggaa cctgagtaga gtgggctctc gagggtgatg aagattgcat 1620 tctttaaagc ccaatttttg agtgcagaat tcttctcttc atccaaaaac tctttatagc 1680 ttgaattggg tcctggattg cagaggaaga tagtgggaat tccgccttta atttgaactg 1740 gcttcccgta ttttgtattt gattgccagt ccttttgggc ccccatgaac tccttaaagt 1800 gctttaggta atgcgggtcg acgtcatcaa tgacgttaaa ccaggcgtca ttgctgtata 1860 cccttgggct cagatctaga tgtccacaca gataattatg tggacctaat gatctggccc 1920 acatcgtctt ccccgtccta ctgtcaccct caatcactac acttattggt ctattggccc 1980 gcgcagcggc actgacgacg ttctcggcag cccacacttc aagttcttct ggaacttgat 2040 cgaaagaaga agaggaaaaa ggagaaacat aaggagctgg tggctcctga aagattttgt 2100 ctagatttgc atttaaatta tgaaattgca gtacaaaatc cttaggagct agttccttaa 2160 tgactctaag agcctccgac ttacttcccg cgttaagtgc tgcggcataa gcgtcattgg 2220 ctgtctgttg ccctcctctt gctgaccttc cgtcgatctg aaattgcccc cagtcgagaa 2280 tgtccccgtc cttctcgatg taggatttga cgtcggagct ggatttagct ccctgtatgt 2340 tcggatggaa atgtgctgac ctgcttgggg agaccaagtc gaagaatctc tgattctggc 2400 actggtactt cccttcgaac tggatgagca cgtgaatatg aggttcccca ttttcgtgaa 2460 gctctctgca gattttgatg aattttttat ttgttggggt ttgtaggttt tgaagttggg 2520 aaagtgcttc ctcttttgtg agagagcatt ttggataagt gaggaaataa tttttggaat 2580 taataanaaa acgtttngga tgcatgttga ccaaaaaaaa gacccgattg accagctctt 2640 acaactctcc cctgtatatt gggtctcaat atatagtgag accccaatgg cattgccgta 2700 attttggaac gaaaatcaaa atcctcaccc tccaaaaagc ggacatccgc ataatatt 2758 //