ID AY456132; SV 1; linear; genomic RNA; STD; VRL; 2466 BP. XX AC AY456132; XX DT 30-NOV-2003 (Rel. 78, Created) DT 03-DEC-2003 (Rel. 78, Last updated, Version 2) XX DE Grapevine leafroll-associated virus 2 strain Alfie membrane associated DE protein P6 (P6) and Hsp70-like protein genes, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 2 OC Viruses; Riboviria; Closteroviridae; Closterovirus. XX RN [1] RP 1-2466 RA Bonfiglioli R., Edwards F., Pantaleo A.; RT "Graft incompatibility syndrome in New Zealand Merlot vines involves RT another possible variant of GLRaV-2"; RL Aust. N.Z. Grapegrow. Winemak. 476:50-54(2003). XX RN [2] RP 1-2466 RA Bonfiglioli R., Edwards F., Pantaleo A.; RT ; RL Submitted (01-NOV-2003) to the INSDC. RL Linnaeus Laboratory, Riversun Nursery Ltd, Lowe Street, Gisborne 3801, New RL Zealand XX DR MD5; 23ef87ce9f428f1a386b772820122b11. XX FH Key Location/Qualifiers FH FT source 1..2466 FT /organism="Grapevine leafroll-associated virus 2" FT /host="Vitis vinifera cultivar Merlot" FT /strain="Alfie" FT /mol_type="genomic RNA" FT /db_xref="taxon:64003" FT gene 211..381 FT /gene="P6" FT CDS 211..381 FT /codon_start=1 FT /gene="P6" FT /product="membrane associated protein P6" FT /db_xref="GOA:Q6SL55" FT /db_xref="UniProtKB/TrEMBL:Q6SL55" FT /protein_id="AAR21243.1" FT /translation="MDQVLQFECLYLLNQAVFAITFVFIXLIIRVIKSFRRSAHEVSNT FT TVRSGGFSTVV" FT CDS 392..2191 FT /codon_start=1 FT /product="Hsp70-like protein" FT /note="capsid protein" FT /db_xref="GOA:Q6SL54" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:Q6SL54" FT /protein_id="AAR21242.1" FT /translation="MVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETN FT NMVFGYEAESLMHNAKVKGSFFRDLKRWVGCGSSNFGEYFDRLKPHYSVRLLKIGSGLN FT DTVALGNYGGTVRSEVHLPGLIASFIKAIISCAEDAFACACTGVICSVPANYDSVQRNF FT TDQCVSLSGYQCVYMVNEPSAAALSACNLINKKSANLAVYDFGGGTFDVSIISYRNNTF FT VVRASGGDLNLGGRDVDRAFLNHLFSLTSLEPDLSLDISNLKESLSKTDAEIVYTLKGA FT DDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYL FT PGLEDILSKHRQVDRILKVSDPRAAVAVGCALYSSCLSGSQGLLLIDCAAHSISIADMS FT CHQIICAPAGAPIPFSGTTPLYLARANKNSQRQIAVFEGEYIKCPKNRKICGSNIKFCD FT IGVTSISYAPITFYLDVSISSVGAISFVVRGPEGKEVSLTGTPAYNFSSVILGTRSVRE FT LHISLSNKVHLGLLLHRKADRRLLFTESETIRYVETVEVADVLKEFKSYSASSLPLDED FT VEPLMGKSVQKILRGGRLEEIPI" XX SQ Sequence 2466 BP; 642 A; 510 C; 602 G; 705 T; 7 other; ttggatggcn agggtttttt acacttctgt taagaaagcg ctctttaaaa gcgggtgttc 60 gctctacgag agttacatta ctccgttcgg ccaggcagtc atggtgtggg aagatgagta 120 gcgctttttt cggcgttgtt atccattgtt atccacagct gtggtgcaat cgcatgacgt 180 acacattgtg tgtcatcgtg taaatatctt atggaccagg ttttacagtt tgagtgtttg 240 tacttgctca accaagctgt ttttgctata actttcgtct ttatcttnct gatcattcgc 300 gtgatcaaat cttttcgcag aagcgcacac gaggtttcga acacgaccgt ccgtagtgga 360 ggtttctcaa ccgttgtgtg atctttacga aatggttgtt ttcggtttag acttcggcac 420 gactttttca acggtctgcg tgtacaagga tggtaaagtt tactcatata agcaaaataa 480 ctccgcgtat attccgactt acctctacct gttctctgaa accaacaaca tggttttcgg 540 ttatgaagcc gaatcactga tgcacaacgc gaaagtaaaa ggctcgttct ttagggactt 600 aaaacgttgg gtgggttgcg gttcaagtaa ctttggagaa tacttcgatc gcttgaaacc 660 gcactactcc gttcgtctgc taaaaatagg ttctggcttg aatgatacag ttgctctcgg 720 aaattacgga ggtaccgtcc ggtctgaagt gcacttgccg gggttgatag cctcgtttat 780 taaagcgatt attagttgcg ccgaagacgc tttcgcttgt gcgtgtacgg gcgtgatatg 840 ttcggtgcct gccaattacg atagcgtgca aaggaatttc accgaccaat gtgtttcttt 900 gagtggttat caatgcgtgt atatggtcaa cgaaccatca gcagcagctt tatcagcttg 960 caatttaatc aataagaaat cagcgaatct ggcggtatac gattttggtg gtggaacttt 1020 tgacgtgtcc atcatttctt accgcaacaa cacgtttgtg gtgcgcgctt ccgggggaga 1080 cctgaatctg ggcggaagag atgtggacag agctttttta aaccaccttt tttctcttac 1140 ttcattagaa cccgatctat cgttagacat ttcgaatcta aaagagtcgc tatcgaaaac 1200 tgatgcggag atcgtctaca ctttaaaagg ggctgatgat aaaagggagg atgttagggt 1260 gaacaaaagt attcttacgg cagttatgct cccttacgtg aatagaactc taaaaatctt 1320 agaatctact ttaaagtcgt acgcgaaaaa catgggtggg atgcgcaatg ttaagtgcga 1380 tttagtactg attggggggt cttcttatct tcccggtctg gaggacatcc tgtcgaaaca 1440 ccgacaagtt gatcgaatac taaaagtttc cgaccctcga gcagcagtcg cggtcggttg 1500 tgcgctgtac tcatcgtgcc tctcgggttc acagggattg ttactgatcg attgcgcagc 1560 tcacagtatc tcgatagcgg acatgagctg tcaccagatc atttgcgctc cggccggagc 1620 tcctattccg ttctcgggta ctacacctct atacttagct agagctaaca agaactcgca 1680 acgtcaaatt gcagtgttcg agggtgaata tataaaatgt cccaaaaaca gaaaaatctg 1740 tgggtcgaac ataaaattct gcgacattgg cgtgacgagc atctcgtacg cgcctatcac 1800 cttctatctg gatgtttcga tctctagtgt gggcgccatt tcatttgtgg tnagaggccc 1860 cgaaggaaaa gaagtttcct tgacgggtac tcccgcttac aatttctctt ctgtgattct 1920 cggaacacgt agtgttcgag agctacatat tagtttaagc aataaagttc atctcggcct 1980 actgttacac cgaaaagcgg atcgtcggtt attgtttacc gaaagtgaga caattcgtta 2040 cgtcgaaaca gtggaagtgg cggatgtgct gaaggagttc aaaagttact cggctagctc 2100 tctaccgttg gatgaagatg tcgaaccact catgggaaag tctgttcaaa aaattttacg 2160 gggaggcaga ttggaagaaa tacctatcta aaagtattgc cgcacactcc gcggacgtga 2220 aaaatctacc agatactcaa ttgtacggag gtagaattgt aaagaagtcc gattttgagt 2280 ctgcagctcc gaaatcattc gagcaggaat tgggattatt catactaagc gagcgagatg 2340 tggggtgggg caagatgtgt ggaatgactg tggaagaggc agcgtaccaa ctcacgaacc 2400 ccaatgcttt tcctatcgta gctgaaaaat ntgatccgga tnaaagantn aaggccaaaa 2460 aactcg 2466 //