ID AY429435; SV 1; linear; genomic RNA; STD; VRL; 3356 BP. XX AC AY429435; XX DT 15-JAN-2004 (Rel. 78, Created) DT 28-MAY-2005 (Rel. 84, Last updated, Version 2) XX DE Cucumber mosaic virus segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3356 RA Yan L., Xu Z., Goldbach R., Chen K., Prins M.; RT "Complete nucleotide sequence of cucumber mosaic virus (CS isolate) RNA1"; RL Unpublished. XX RN [2] RP 1-3356 RA Yan L., Xu Z., Goldbach R., Chen K., Prins M.; RT ; RL Submitted (06-OCT-2003) to the INSDC. RL Plant Science, Lab of Virology, Wageningen University, Binnenhaven 11, RL Wageningen 6709 PD, Netherlands XX DR MD5; 43656fed3532afcd39915e6e1623b060. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3356 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Arachis hypogaea L." FT /lab_host="Nicotiana benthamiana" FT /isolate="CS" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT gene 96..3077 FT /gene="1a" FT CDS 96..3077 FT /codon_start=1 FT /gene="1a" FT /product="1a protein" FT /db_xref="GOA:Q6T7D8" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q6T7D8" FT /protein_id="AAR89474.1" FT /translation="MATSSFNINELVASHGDKGLLANALVDKTAHEQLEEQLQHQRRGR FT KIYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRSAFSEAEDVTPLSGKLNSTIFSRVRKFKTLVAFDFVNESTMPYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVINAGIMTYKIIGVPGTCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFATLLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAHVATQ FT AVTDGKVLAAQKAEKLAEKLAQPVIEVSDRPEAPSPTPGDIDDVCGKEQEVSELDSLSA FT QTRSPITRIAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPLVNVHFSTGRWMRPIPEGTVYSVGYNERGLGSKSDGELYIVNGECVICNSES FT LSTVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFQS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDESSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDPSRFYITMTQADKASLISRAKEMNLPKTFWDERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3356 BP; 840 A; 735 C; 816 G; 965 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtgaaataa ccctttgaaa 60 acctctctct tctaatcttt tctctgataa ttcctatggc gacgtcctcg ttcaatatca 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaacgccctc gttgataaga 180 cagctcatga gcagcttgag gagcaattac agcatcaacg tagaggccgt aagatctaca 240 ttcggaacgt tctgagtgta aaggattctg aggtcattcg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcatc aggtctgcgg caggaccttg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacacaac gtacactgct 480 gttccccttg cttgggtatc cgcgataaaa tgcgccacgc ggaacgttta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg gcagccggac ttttgcactc 600 atcctgctgc ggattgcaaa gtacaagccc actttgctat atccattcat ggaggttatg 660 atatgggctt cagaggatta tgtgaagcga tgaacgctca cggaaccact attctgaagg 720 gaacgatgat gttcgatggc gctatgatgt ttgacgacca aggtgtaata cctgaactta 780 attgccagtg gagaaagatc aggagtgctt tctccgaagc tgaggacgtc acaccgttgt 840 ctggtaaact taattccaca atattctctc gagtgcgtaa gtttaagact ttggtagctt 900 ttgactttgt caatgagtct actatgcctt atgttcatga ttgggagaat ataaaatctt 960 ttctcacaga ccagacttat tcataccggg gaatgactta cggtattgaa cgttgcgtta 1020 ttaacgctgg tattatgacg tataagatca ttggtgtacc tgggacttgc ccgcccgaac 1080 tcattcgaca ttgtatttgg ttcccctcta ttaaagacta tgttggtcta aagattcccg 1140 cgtcacagga cttggttgag tggaaaacag tgcgtatttt gacgtcaacg ttacgtgaga 1200 ctgaagagat tgctatgagg tgttataatg ataagaaagc gtggatggaa cagttcaagg 1260 ttatcttggg tgttttatct gcaaaatcat cgaccattgt tatcaatggt atgtccatgc 1320 aatctggcga gcgtatagac attaatgatt atcattatat tggattcgcc actctccttc 1380 acacaaaaat gaagtatgaa caactaggga aaatgtatga tatgtggaac gcttcgagta 1440 tttcgaagtg gttcgcagcg ttgactcgtc cgctgcgtgt atttttctct agcgttgttc 1500 acgcattgtt cccgactttg agaccccgcg aggaaaaaga attcttaatt aaactctcta 1560 ccttcgtgac ttttaatgaa gagtgctcat ttgatggtgg agaggaatgg gacgtgatat 1620 catctgctgc acacgttgct acacaggctg ttaccgatgg gaaagttttg gctgcgcaga 1680 aggccgagaa gctcgctgag aagcttgcac aacccgtgat tgaggtatcg gacagacctg 1740 aggcgccatc tccaacgcct ggtgatatag atgatgtttg tggaaaggag caagaggttt 1800 cggaacttga ctccttatca gctcagacac gttcccccat cactaggatt gctgagcgag 1860 ctactgctat gttagagtac gccgcttatg agaaacagct gcacgacacc acagtgtcta 1920 atttgaaacg catttggaac atggcgggtg gtgatgacaa gagaaactcc ctcgagggta 1980 atctgaagtt tgttttcgac acgtatttta ccgttgatcc cttggtgaat gttcatttct 2040 ccaccgggcg gtggatgcgt ccgatacccg agggcaccgt ttactcggtt ggttataatg 2100 agcgcggttt aggttcaaag tctgatggag agctttacat tgttaatggt gagtgtgtga 2160 tttgcaacag tgagtcttta tctactgtca ctcgctcgct tcaagctccg actggaacca 2220 ttagtcaagt cgacggggtt gccggttgcg ggaaaaccac agcaataaaa tccatttttg 2280 agccgtccac tgatatgatc gttaccgcga acaaaaaatc cgctcaagat gtgcgtatgg 2340 cactgtttca atcatcagat tccaaagaag cttgcacttt cgttcgtact gccgattctg 2400 tcctacttaa tgagtgtcca actgttagta gggttttggt tgacgaggtt gtgctgcttc 2460 attttggtca gctgtgtgct gtcatgtcca aactgaaggc tgtccgagct atatgtttcg 2520 gggattcgga gcaaattgct ttttcttctc gagatgcctc gtttgatatg cgtttctcta 2580 agattattcc tgatgaatct agtgatgctg ataccacatt ccgtagcccg caagatgttg 2640 tgccgcttgt gcgtttaatg gctacgaagg cccttccgaa agggacccat tcgaagtaca 2700 cgaaatgggt ttctcaatct aaggtgaaga gatctgttac gtctcgtgct atcgctagtg 2760 tgacattggt cgacctggat ccttccaggt tttatataac aatgacccag gctgataaag 2820 cttcactgat ttcaagggcg aaagagatga acttaccaaa gactttttgg gatgaaagga 2880 ttaaaactgt acatgagtct caaggtattt ctgaagacca cgttactttg gtaagattga 2940 agagcacaaa gtgtgacctg ttcaagaaat tttcatattg tcttgttgct ttgacaagac 3000 acaaggtcac tttccgctac gagtactgtg gcgtactaaa cggtgattta atcgccgaat 3060 gtgttgctcg tgcttagagg tctccctcct tcgggcggga cctgagttgg cggtaatcta 3120 taaaccgtct gaagtcacta aacactttgt ggtgaacggg ttgtccatcc agcttacggc 3180 taaaatggtc agtcgtggag agatccacgc cagcagactt acaagtctct gaggtgccct 3240 tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtacttct agcacaagat 3300 gctagtctca gggtacgggc accccccact ttagtggggt ctcttaaagg agacca 3356 //