ID AY380581; SV 1; linear; genomic RNA; STD; VRL; 4452 BP. XX AC AY380581; XX DT 30-AUG-2004 (Rel. 81, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Guaroa virus strain BeH22063 polyprotein gene, complete cds. XX KW . XX OS Guaroa virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-4452 RX DOI; 10.1099/vir.0.80122-0. RX PUBMED; 15448370. RA Briese T., Rambaut A., Lipkin W.I.; RT "Analysis of the medium (M) segment sequence of Guaroa virus and its RT comparison to other orthobunyaviruses"; RL J. Gen. Virol. 85(Pt 10):3071-3077(2004). XX RN [2] RP 1-4452 RA Briese T., Lipkin W.I.; RT ; RL Submitted (03-SEP-2003) to the INSDC. RL Greene Infectious Diseases Laboratory, 1801 Mailman School of Public RL Health, Columbia University, 722 West, 168th Street, New York, NY 10032, RL USA XX DR MD5; 18b5e51c37a2791ac048e2501c5fbe41. DR EuropePMC; PMC1472162; 16699043. DR EuropePMC; PMC3541803; 22278828. DR EuropePMC; PMC4345823; 25695188. XX FH Key Location/Qualifiers FH FT source 1..4452 FT /organism="Guaroa virus" FT /segment="M; middle" FT /strain="BeH22063" FT /mol_type="genomic RNA" FT /note="provided by Bob Tesh, University of Texas, FT Galveston" FT /db_xref="taxon:80941" FT CDS 20..4276 FT /codon_start=1 FT /product="polyprotein" FT /note="G2; NSm; G1" FT /db_xref="GOA:Q678K8" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR005168" FT /db_xref="InterPro:IPR014413" FT /db_xref="InterPro:IPR026400" FT /db_xref="UniProtKB/TrEMBL:Q678K8" FT /protein_id="AAR28442.1" FT /translation="MDISKHMQMLVVLYLISLSGTTPVVFNKCFTGGSLVFSKKSDTGM FT SEICLKDDISMIKTSIDFKKENNTIVATNKVYKQWIVQDWKDCHPMKMVGGTINIIEVT FT ADLMFKSVSYTCTTDCTIGIDRENALIIFQTNKLNHFEVSGTTIKTGWFKNKASVSLDQ FT TCEHIKITCGRKSMQLHACFKDHMSCIRFLHRTILPGYMATSICQNIEVILLTVFTLII FT FGVLCILIKTYICYLFLPLYMIPAYIYGCVYNKSCKICINCGLAYHPFTNCGSHCVCGA FT KFETSDRMRIHRQSGFCPGYKSLRAARSMCKSKTCSLIFSIGGAILILSFVTPIAGEKL FT YTLDELPEAYTTEINSIKIMQNYLELKLWITITALFIIALIMMISNFIVVNICKLFYFH FT CYECNMYHTKRNIRYNGDFCNKCGFCMCGVLEDVEGLKIHKTTESCKIKMHYRSTNFAL FT ILFGLLLILISVSASLASCDAEEPNINCIGYKINLTCNKPLTNEEAVNYLVENNIIEDV FT EREKALELTTDLANMKKQLNFQTNFKTCLVLEHVFLLNQCGYYKDLESNNEIKQIPWRT FT IAKTEAFDICSIRKHQHFCRCMATGEKCNSANWDFAKEMNDIYNFKPTFYRRDVNLFLR FT IFSEAFPGSTYRYLYSILKNKDIEKIKELLTDIEKRFPYNQLLVGFIKFGHILLIDNLA FT YSLPPDVSRMGAESRSKVETSGYQVGQPILSCNNPLIIRCMSPKLDVVIPALLKCHRNN FT KDSLYYIDHKVYTSFQHPQSWCFADKHCLIHFRPVPGSELNAVKKRNCFSSQVTEDQDQ FT YNTKQAFCRAIKFGICTNILNQQSRSIECDNNLIYNTDSKLTNELTGDVNEICLNTGCK FT DGRYPLNPINSVNCTWEENVLKSKHAQLIAVENIEELKRLTQDRLTHTLDIYRFKKTIN FT FPKIIPSKKYISLQGIDSSDGIDSSYIEVDITARTNEALGIQVRAPDNQPIMDLIIHIT FT LASTKADYLRIYETGPTVGINVNHDEHCTGSCPEQIPHKQNWLTFSKERTSQWGCEEFG FT CLAINEGCLFGSCQDIIKSEARVFKKTTVEKHIVRLCIIHANEDKCTDLDPEEPLITES FT LELQLDSITTKNLPELILIKDHKVYTGQINDLGAVSSGCGDVQVVNNTIFGGGTVKFDY FT LCYGAHRKDVVVRKCYNNHYESCKLLAEQKELTFLDESSAVSLEHNNYIIGSLKLKIVL FT GDIRYKLFRKDIQLEVEGECIGCKNCLSGIDCNFKVTSPSETSCKIESPCSMFIENLII FT KAGHTDTNFKIHCKTIDSKVIEFKICNNIYKVHITETKGNDKIELNTGDQTSYVQQHDN FT RCGTWLCRLKEEGIGLLLEPLKAIFGTYITWFWVILGIIVFLFIGVYIFLPMIFKVRDI FT LKKNEEEYKKDIRYRE" FT variation 1872 FT /replace="c" FT /note="substitution creates a potential glycosylation site" XX SQ Sequence 4452 BP; 1624 A; 672 C; 848 G; 1308 T; 0 other; aaatatagtg tcttgcagga tggatatttc aaagcacatg caaatgttgg tagtgctcta 60 cttgataagc ttgtctggaa ctactccggt ggtgtttaac aagtgtttca ccggtgggtc 120 tctggttttc tcaaaaaagt cagacacagg aatgtctgaa atttgtctta aagatgatat 180 ctccatgatc aaaacatcta ttgattttaa aaaggaaaat aatacgatag tggccaccaa 240 taaagtttat aaacaatgga ttgtccaaga ctggaaggac tgtcatccta tgaaaatggt 300 tggaggaact attaatataa tagaagtaac agcagatcta atgtttaaaa gtgtaagtta 360 cacatgcaca acagattgca ctattggcat agaccgtgaa aatgcactga ttatattcca 420 aacaaacaaa ttgaaccact ttgaagtttc tggtacaaca attaagaccg gttggtttaa 480 aaataaggct tcagtttcct tagatcaaac atgtgaacat ataaagataa cttgtggaag 540 gaaatcaatg caattacatg catgtttcaa agaccatatg tcatgcatta gatttttgca 600 cagaacaatt ctaccgggat atatggcaac atctatttgt cagaatatag aagtgatcct 660 cttgaccgta tttacgctta taatctttgg agtactttgt atactgatta aaacatatat 720 atgttaccta tttcttcctc tgtacatgat tccagcttac atttacgggt gtgtgtataa 780 taaaagctgt aagatatgca ttaattgtgg cttagcttat cacccattca ccaattgtgg 840 gtctcactgt gtatgcgggg ccaaatttga aacatctgat agaatgagga tacacaggca 900 gtctggattc tgccctgggt acaaaagcct aagagcagcc aggtctatgt gtaaaagcaa 960 gacttgctcc ctcattttct caataggagg agctatcttg atattatcat ttgttacacc 1020 aattgctgga gaaaagctat atacattgga tgagctccca gaggcataca ctacagaaat 1080 taattcaatt aaaatcatgc agaactattt ggagttaaaa ttgtggataa caataactgc 1140 attattcatt attgctttaa taatgatgat ttctaatttt attgttgtca atatatgtaa 1200 attgttttac tttcattgtt atgaatgcaa catgtatcat acaaagagaa atattaggta 1260 taatggagat ttctgtaaca agtgtggttt ttgcatgtgt ggtgtattag aggatgtaga 1320 aggtttgaaa atacacaaga ccacagaaag ctgcaagata aaaatgcatt atagatctac 1380 caattttgct cttatcttat ttgggttact attaatactt atctcagtta gtgcatcctt 1440 agcaagttgt gatgcagaag aacctaacat aaattgcata ggttataaaa taaatttgac 1500 atgcaataaa ccccttacaa atgaagaagc tgtaaattac ttagttgaaa ataatataat 1560 tgaggatgta gagagggaaa aagcattaga attaacaact gatttagcta atatgaaaaa 1620 gcagttaaac ttccaaacaa attttaaaac ttgtttagta cttgaacatg tattcttgtt 1680 gaatcaatgt gggtactata aagacttaga aagtaataat gagatcaagc agataccctg 1740 gagaacaatt gcaaaaacag aagcttttga tatatgttct ataaggaaac atcagcattt 1800 ctgtagatgt atggcgacag gagaaaagtg caattctgct aattgggact ttgctaaaga 1860 aatgaatgac atatataatt ttaagccaac tttctataga agagatgtca acttattttt 1920 gaggattttt tcagaagcat tccccggaag cacttataga tacttataca gcatactaaa 1980 aaataaggac attgagaaga taaaggagct tctgactgat atagaaaaaa gatttcctta 2040 taatcaattg ttagttggtt ttattaaatt tggtcatatc ctcctaatag ataatttggc 2100 ttactcactc cctccagacg tttcacggat gggtgcagaa tctagaagta aagtggaaac 2160 atctggttat caagtaggac agccgatact ctcatgtaat aatcctttaa taatacgatg 2220 catgagccca aagctggatg ttgtcatccc tgcattatta aaatgccata gaaataataa 2280 ggattcattg tattatatag accataaagt atatacatct tttcaacacc cgcaatcatg 2340 gtgttttgct gacaaacatt gtctaataca ctttagacca gtaccaggat cagagttgaa 2400 tgcagttaaa aagagaaatt gtttcagtag tcaagtgaca gaggaccagg atcagtataa 2460 tactaaacaa gccttttgca gagcaattaa gttcggaata tgtacaaaca tattaaatca 2520 acagtcaaga agcattgaat gtgacaacaa tttgatttac aacacagaca gtaagctcac 2580 aaatgaatta acaggtgatg tcaatgaaat ttgcctgaat actggctgca aagatggacg 2640 ttacccatta aatccaataa attctgtaaa ctgtacttgg gaagagaatg tgttaaaatc 2700 aaagcatgcg cagttgatag ctgtggaaaa catagaagaa ttgaagcgtt tgacacaaga 2760 taggttaaca cacacactcg acatatatag attcaagaag acaatcaact tcccaaaaat 2820 aataccctct aagaaataca ttagtttaca agggatagat tcgagcgatg ggattgatag 2880 ttcttatata gaggttgata taacagcaag gacaaatgag gcacttggga tacaggtccg 2940 tgctcctgat aatcagccaa tcatggatct aattatacat ataactctag cttcaacaaa 3000 ggcagattat cttagaatct atgagacagg cccaacagta ggaattaatg tcaaccatga 3060 tgaacattgt actgggtcct gtcctgaaca aatacctcat aaacaaaatt ggctgacctt 3120 ctcaaaagaa cgaacaagcc aatggggatg tgaagagttt ggatgcttag caataaacga 3180 aggatgtctt tttggttcgt gtcaagacat tattaaaagt gaggctagag tttttaaaaa 3240 aacaacagta gagaagcaca tagttcggct ttgtattatc catgcaaacg aagataagtg 3300 tactgattta gacccagagg aaccgttaat aacagaaagc ttagaattgc aattggatag 3360 tatcacaaca aagaacctac cagaattaat tctaattaaa gatcacaagg tttatactgg 3420 gcaaattaat gatctgggag cggtatcatc aggatgcggt gatgtccagg tggtgaacaa 3480 cactatattt ggtggtggta ctgttaaatt tgactatctg tgttatgggg ctcacaggaa 3540 ggatgttgtc gtccgtaaat gttataataa ccattatgaa tcgtgtaaat tattagctga 3600 acagaaagaa ttaacattct tagacgagtc atcagctgtg agtttagagc ataataacta 3660 tataatcgga tctttaaaat taaaaattgt gctaggcgat ataagataca aattattcag 3720 aaaagacatt cagttagagg ttgaagggga gtgcattgga tgtaaaaatt gtttaagcgg 3780 catagattgc aattttaaag taacatctcc tagtgaaaca tcatgtaaaa tcgagagtcc 3840 ctgttcaatg tttatagaga atttgattat caaagcaggc cacacagaca caaactttaa 3900 aattcattgc aaaacaattg acagcaaggt aattgaattc aagatatgca ataatattta 3960 caaagtgcat attacggaga ctaagggtaa tgataaaatt gaattaaaca caggagatca 4020 aacatcttat gtacagcagc atgataatag atgtggaacc tggctgtgca gacttaaaga 4080 agaaggaata ggcctgttgc ttgagccatt aaaggcaata tttgggactt atattacatg 4140 gttttgggtt attctaggga ttattgtgtt cttatttata ggggtatata tatttttgcc 4200 tatgattttc aaggtaagag atatattgaa aaagaatgaa gaggaataca aaaaggacat 4260 cagatataga gaataattac atgaggtagc caatagagta aggtaagtac aaataaatta 4320 tcaaacagat gataaacaaa atcaagcaaa aataccaaaa gaagaaaata acaaaaaaac 4380 acacacaaca actcctgcta tacattagtg gcaggaaaag aatacagcat ttatctccac 4440 tatttttatg tt 4452 //