ID   AY376393; SV 1; linear; genomic RNA; STD; VRL; 804 BP.
XX
AC   AY376393;
XX
DT   08-OCT-2003 (Rel. 77, Created)
DT   08-OCT-2003 (Rel. 77, Last updated, Version 1)
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DE   Cymbidium mosaic virus isolation-source Oncidium orchid coat protein (CP)
DE   gene, complete cds.
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KW   .
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OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
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RN   [1]
RP   1-804
RX   DOI; 10.1016/S0378-1119(96)00419-2.
RX   PUBMED; 8955635.
RA   Srifah P., Loprasert S., Rungroj N.;
RT   "Use of reverse transcription-polymerase chain reaction for cloning of coat
RT   protein-encoding genes of cymbidium mosaic virus";
RL   Gene 179(1):105-107(1996).
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RN   [2]
RP   1-804
RA   Srifah P., Loprasert S., Rungroj N.;
RT   ;
RL   Submitted (28-AUG-2003) to the INSDC.
RL   Genetics Department, Kasetsart University, 50 Phaholyotin Road, Chatujak,
RL   Bangkok 10900, Thailand
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DR   MD5; 5b394e37f02342e7c43359c7afb1a08c.
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FH   Key             Location/Qualifiers
FH
FT   source          1..804
FT                   /organism="Cymbidium mosaic virus"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /isolation_source="Oncidium orchid"
FT                   /note="CyMV-onc"
FT                   /db_xref="taxon:12178"
FT   gene            47..718
FT                   /gene="CP"
FT   CDS             47..718
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q6U844"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q6U844"
FT                   /protein_id="AAQ88334.1"
FT                   /translation="MGEPTPTPAATYSAADPTSSPKLADLTAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVVAAAIDLARAYADVGASKSATLLGVCPTKPDVRRAALAAKIF
FT                   VANVTPRQFCAYYAKVLWNLMLTTNDPPANWAKAGFQENTRFAAFDFFDAVDSTAALKP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT                   E"
XX
SQ   Sequence 804 BP; 186 A; 265 C; 175 G; 178 T; 0 other;
     taggatcctg gcgagggtta agttaccaca ataacttgaa ataactatgg gagagcccac        60
     tccgactcca gctgccacct actccgctgc tgaccccact tcatcaccca agctggccga       120
     cctcaccgcc atcaagtact caccagttac ctcatcaatc gccacacccg aagagatcaa       180
     ggccataacc cagctgtggg ttaacaacct tggccttccc gccgacaccg tagtagccgc       240
     agccattgat ttggctcgtg cctacgctga cgtcggggct tccaagtctg ctaccctgct       300
     tggtgtctgt cccacgaagc cagatgtccg tcgcgccgct cttgccgcga agatcttcgt       360
     ggccaacgtc accccccgcc agttttgcgc ttattacgca aaagtgttgt ggaatctgat       420
     gctaaccacc aatgatccgc ccgccaattg ggccaaggct ggtttccagg agaatacccg       480
     gtttgctgcc tttgacttct tcgatgccgt cgactccacc gccgctttga aacccgctga       540
     atggcaacgt cgccctaccg accgtgaacg tgccgcccac tcaatcggga agtacggtgc       600
     tcttgcccga cagcgcatcc agaacggcaa cctcatcacc aacattgccg aggttaccaa       660
     gggccatctt ggctccacta acaccctcta tgctctgcct gcccccccta ctgaataacg       720
     ccaaacttaa taaggcgtgt ggttttctga agtttgtttc cactaccggc ataatatgct       780
     tagccggata aataaaaaaa aaaa                                              804
//